Solanum lycopersicum mRNA Solyc06g071100.2.1

mRNA details  
Name
Solyc06g071100.2.1
Type
mRNA
Length
3,365
Organism
Solanum lycopersicum
Description
H-ATPase (AHRD V1 ***- Q8L6I3_ORYSJ); contains Interpro domain(s) IPR006534 ATPase, P-type, plasma-membrane proton-efflux
Location(s)
SL2.50ch06:43669489..43676922
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0016020
  • GO:0008152
  • GO:0016021
Length
7434
Nb exon
22
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g071100.2.1 H-ATPase (AHRD V1 ***- Q8L6I3_ORYSJ); contains Interpro domain(s) IPR006534 ATPase, P-type, plasma-membrane proton-efflux

TTATGACAAATATTTTGAAACGGGGAGAGTAAGAGTAATAACATAACAGGGTAGCAGCCTGTTATATAGTAGTCTTCCACACTCTGTTTTGGATTTGGTGGGCGATTTACCAATCTTATTTCTGGACCCGAGAAAAATCCTATCTTTCTTTGGAAGAGAGGAAATTGAGCAAGATGGGGGAGAAACCTGAGGTGTTAGATGCTGTATTAAAGGAGACTGTGGATTTGGAGAATATACCCATTGAAGAAGTTTTTGAAAATTTGAGATGTACCAAAGAGGGTCTTACTGGTACAGCTGCCCAAGAAAGGTTGGCAATTTTTGGGTACAACAAACTAGAGGAGAAGAAGGAGAGCAAATTCTTGAAATTTCTGGGGTTTATGTGGAACCCCCTCTCATGGGTTATGGAAGCTGCTGCTATTATGGCAATTGCTCTTGCAAATGGAGGAGGAAAGCCTCCGGATTGGCAAGATTTTGTGGGTATTATTACCTTGCTAGTGATTAACTCAACAATTAGTTTTATTGAGGAGAATAATGCTGGCAATGCAGCAGCTGCTCTCATGGCTCGTCTCGCTCCTAAAGCCAAGGTTCTTCGAGATGGAAAATGGAATGAAGAAGATGCTGCTGTTCTTGTTCCTGGGGACATTATCAGTATTAAACTGGGAGATATTATTCCTGCAGATGCTCGTCTTCTTGAAGGTGATCCCCTGAAAATTGACCAGTCTGCTTTGACTGGTGAATCTCTTCCTGTAACTAAAGGTCCTGGAGATGGTGTCTACTCTGGTTCTACCTGTAAGCAGGGAGAGATAGAAGCTGTCGTCATCGCCACTGGGGTTCATACCTTTTTTGGGAAGGCTGCACACCTTGTTGACAGTACAAATCAAGTGGGACACTTCCAAAAGGTTTTGACTGCTATTGGAAACTTCTGCATCTGTTCTATTGCAGTGGGGATGATAATAGAGATCATTGTGATGTACCCTATCCAACACCGCAAATATCGCCCTGGGATTGACAATCTTCTTGTCCTTCTCATTGGTGGAATTCCAATTGCCATGCCAACGGTTCTTTCAGTCACGATGGCAATTGGATCTCATCGGCTCGCTCAACAGGGTGCTATTACGAAAAGAATGACAGCTATTGAGGAGATGGCTGGTATGGACGTGCTTTGTAGTGACAAGACAGGGACCCTTACACTAAACAAGCTTACTGTTGACAAAAACCTTGTTGAGGTTTTTGCCAAAGGTGTTGACGCAGATACTGTCGTTCTGATGGCAGCTCGAGCGTCTCGTACAGAGAACCAGGATGCCATTGACACTGCTATTGTTGGGATGTTGTCTGACCCGAAGGAGGCTCGTGCTGGCATTCGTGAAATACACTTTCTTCCTTTCAATCCAACTGACAAGCGTACAGCGCTTACTTATCTTGATGGTGAAGGAAAAATGCACAGGGTCAGCAAAGGGGCACCAGAGCAGATCCTAAATCTTGCACACAACAAGTCAGACATAGAACGTAGAGTTCATGCGGTGATTGATAAGTTTGCTGAGAGGGGTTTGCGCTCACTTGGTGTGGCCTACCAGGAAGTTCCAGAGGGAAGGAAGGAGAGTTCCGGAGGACCATGGCAATTCATTGGTCTCCTGCCTTTGTTTGATCCTCCAAGACACGACAGTGCTGAGACTATAAGGAGGGCTTTGAATCTTGGAGTGAATGTTAAAATGATCACAGGGGATCAACTGGCTATAGGAAAAGAAACAGGGCGTCGTCTGGGAATGGGAACCAACATGTATCCTTCATCTGCTCTGTTGGGGCAGACTAAGGATGAATCAATTGCTTCTTTACCAATTGATGAACTGATAGAAAAGGCTGATGGTTTTGCTGGAGTATTCCCTGAGCACAAATATGAGATTGTAAAACGCTTGCAAGCTAGGAAGCATATCTGTGGAATGACTGGAGATGGAGTCAATGACGCTCCTGCTTTAAAGAAGGCTGATATTGGGATAGCTGTTGATGATGCCACTGATGCTGCTCGTAGTGCTTCTGACATTGTTCTTACTGAACCTGGTCTCAGTGTCATCATTAGTGCTGTTCTGACTAGTCGAGCAATCTTTCAAAGGATGAAAAACTATACGATATATGCTGTTTCCATCACAATCCGTATTGTGCTTGGTTTTATGCTTCTGGCCCTTATCTGGAAGTTTGACTTTCCACCTTTCATGGTGCTTATCATTGCAATCCTCAATGACGGTACCATTATGACAATATCAAAGGATAGGGTCAAACCATCTCCTCTGCCTGATAGTTGGAAGCTGGCTGAGATTTTCACTACTGGGGTTGTTCTTGGTGGCTACTTGGCAATGATGACAGTCATTTTCTTTTGGGCAGCATATGAGACAGATTTCTTCCCGCGTGTATTTGGGGTATCAACACTTCAGAGGACAGCAACTGATGACTTCAGGAAACTTGCATCAGCAATTTACCTTCAAGTGAGCACTATCAGTCAGGCCCTGATATTTGTCACAAGATCTCGAAGTTGGTCGTTTGTTGAGCGTCCTGGTTTGTTGCTTGTGGTTGCTTTTCTGATTGCTCAACTGGTTGCCACCTTGATTGCTGTTTATGCAAGTTGGAGCTTTGCTGCAATCGAAGGAATTGGCTGGGGTTGGGCAGGAGTGATCTGGCTCTACAATTTAGTATTCTACTTCCCGCTTGATATCATCAAGTTCTTAATCAGATATGCTCTCAGTGGAAGGGCCTGGGATCTTGTTCTTGAGCAAAGGATTGCTTTCACCAGGAAGAAGGATTTCGGAAAAGAACAACGTGAGCTTCAATGGGCCCACGCACAGAGGACCCTTCATGGGCTGCAAGTTCCTGACACCAAATTGTTTAGTGAAGCTACCAATTTCAATGAGCTTAATCAGTTAGCTGAGGAAGCAAAGAGGAGAGCTGAAATCGCTAGGCAACGTGAGCTGCACACACTTAAAGGTCACGTGGAATCAGTGGTGAAGTTGAAGGGTCTTGACATAGAGACAATTCAGCAGTCATACACTGTTTGATGTGGGAGCAAGTATGACTAGTGCTACTTAACTGGTGAGTGGGTGATAGAATGAAGACATAATGAGTGTGTGAGTTACCTCTGGAGCGACAAGTTCATAGTAGTAACATCTTCAGCGTTTAAAAGTGCCTTATATATTTTATACATTTTTTTGCTTTGAATTCTTGGTTCATCTTTTCCTGCTTTCATGTCTTGACTACATTATATATATTACAATTGACCAAGAATGAATATTAAGCTATAACAGCATTCATTATCTATATTCTCAAGAGTTTTTATTTCATGGTTTAGCAGCATCTGGTTTTTGTACTGCTTCTCTCTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g071100.2.1SL2.50ch06:43669809..43676621957-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g071100.2SL2.50ch06:43669489..436769227,434-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g071100.2.1.1SL2.50ch06:43676771..43676922152-n/a
exonexon:Solyc06g071100.2.1.10SL2.50ch06:43674366..43674485120-n/a
exonexon:Solyc06g071100.2.1.11SL2.50ch06:43674163..43674285123-n/a
exonexon:Solyc06g071100.2.1.12SL2.50ch06:43673968..43674072105-n/a
exonexon:Solyc06g071100.2.1.13SL2.50ch06:43673617..43673761145-2
exonexon:Solyc06g071100.2.1.14SL2.50ch06:43672834..43672998165-2
exonexon:Solyc06g071100.2.1.15SL2.50ch06:43672483..43672721239-n/a
exonexon:Solyc06g071100.2.1.16SL2.50ch06:43672264..4367229633-n/a
exonexon:Solyc06g071100.2.1.17SL2.50ch06:43672092..4367217382-2
exonexon:Solyc06g071100.2.1.18SL2.50ch06:43671350..43671510161-n/a
exonexon:Solyc06g071100.2.1.19SL2.50ch06:43670692..43670877186-n/a
exonexon:Solyc06g071100.2.1.2SL2.50ch06:43676568..4367664275-n/a
exonexon:Solyc06g071100.2.1.20SL2.50ch06:43670429..43670611183-n/a
exonexon:Solyc06g071100.2.1.21SL2.50ch06:43670166..43670344179-1
exonexon:Solyc06g071100.2.1.22SL2.50ch06:43669489..43669906418-n/a
exonexon:Solyc06g071100.2.1.3SL2.50ch06:43676353..43676472120-n/a
exonexon:Solyc06g071100.2.1.4SL2.50ch06:43675886..4367598499-n/a
exonexon:Solyc06g071100.2.1.5SL2.50ch06:43675662..43675799138-n/a
exonexon:Solyc06g071100.2.1.6SL2.50ch06:43675381..43675515135-n/a
exonexon:Solyc06g071100.2.1.7SL2.50ch06:43675111..43675290180-n/a
exonexon:Solyc06g071100.2.1.8SL2.50ch06:43674808..43675014207-n/a
exonexon:Solyc06g071100.2.1.9SL2.50ch06:43674569..43674688120-n/a
intronintron:Solyc06g071100.2.1.10SL2.50ch06:43674486..43674568n/a-n/a
intronintron:Solyc06g071100.2.1.11SL2.50ch06:43674286..43674365n/a-n/a
intronintron:Solyc06g071100.2.1.12SL2.50ch06:43674073..43674162n/a-n/a
intronintron:Solyc06g071100.2.1.13SL2.50ch06:43673762..43673967n/a-n/a
intronintron:Solyc06g071100.2.1.14SL2.50ch06:43672999..43673616n/a-n/a
intronintron:Solyc06g071100.2.1.15SL2.50ch06:43672722..43672833n/a-n/a
intronintron:Solyc06g071100.2.1.16SL2.50ch06:43672297..43672482n/a-n/a
intronintron:Solyc06g071100.2.1.17SL2.50ch06:43672174..43672263n/a-n/a
intronintron:Solyc06g071100.2.1.18SL2.50ch06:43671511..43672091n/a-n/a
intronintron:Solyc06g071100.2.1.19SL2.50ch06:43670878..43671349n/a-n/a
intronintron:Solyc06g071100.2.1.2SL2.50ch06:43676643..43676770n/a-n/a
intronintron:Solyc06g071100.2.1.20SL2.50ch06:43670612..43670691n/a-n/a
intronintron:Solyc06g071100.2.1.21SL2.50ch06:43670345..43670428n/a-n/a
intronintron:Solyc06g071100.2.1.22SL2.50ch06:43669907..43670165n/a-n/a
intronintron:Solyc06g071100.2.1.3SL2.50ch06:43676473..43676567n/a-n/a
intronintron:Solyc06g071100.2.1.4SL2.50ch06:43675985..43676352n/a-n/a
intronintron:Solyc06g071100.2.1.5SL2.50ch06:43675800..43675885n/a-n/a
intronintron:Solyc06g071100.2.1.6SL2.50ch06:43675516..43675661n/a-n/a
intronintron:Solyc06g071100.2.1.7SL2.50ch06:43675291..43675380n/a-n/a
intronintron:Solyc06g071100.2.1.8SL2.50ch06:43675015..43675110n/a-n/a
intronintron:Solyc06g071100.2.1.9SL2.50ch06:43674689..43674807n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17855864%2Fdetails feature 17855864
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