Solanum lycopersicum mRNA Solyc06g068880.2.1

mRNA details  
Name
Solyc06g068880.2.1
Type
mRNA
Length
1,465
Organism
Solanum lycopersicum
Description
Serine carboxypeptidase 1 (AHRD V1 **** B6U0V5_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase
Location(s)
SL2.50ch06:42703929..42707128
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006508
Length
3200
Nb exon
11
Sifter term
  • GO:0005515
  • GO:0004185
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g068880.2.1 Serine carboxypeptidase 1 (AHRD V1 **** B6U0V5_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase

TCCATGACTTTCTGTTTGTGCCTACCAGTATATTAGCTTCAGCTCTCTCAAGTATTGTCACTCAAAATCAGAAACTCCTTTTCTTCTTCAACAAGAACTTGAAAAAAGCAATGGCTCTGTCTCTCTTTTTCTTTCTTCTTTGTGCTTCTGTAAGAATTGGGTATGCATTTCCTCCTCATCATCCAGACAAAATCATTCTATTACCTGGACAACCCCAAGTGGGATTTCAACAGTTTTCAGGCTATGTCACTGTTGATGACAAGAAACAAAGAGCTCTCTTTTACTACTTTGTGGAAGCAGAAACAGATCCAGCTTCTAAGCCTCTTGTTTTATGGCTAAATGGAGGACCTGGTTGTTCTTCTGTGGGAGTTGGTGCATTTTCTGAGAATGGTCCATTCAGACCTAGAGGACAAGTTCTTGTTAAGAATGAACACAGTTGGAATAAAGAGGCAAATATGTTGTACTTAGAGTCTCCAGTTGGGGTTGGCTTCTCTTATTCAACTAATACATCTTCCTATGAGACTGTTAATGATGAGATAACAGCCAGGGACAATGTTGTTTTCTTGCAACGCTGGTTTAACAAATTCCCACAGTATAGAGAAAACAATTTATTTTTAACTGGAGAGAGTTATGCAGGCCATTATGTACCTCAACTTGCCAAGCTCATGATTGAGCTGAACAACAAGAAGAAATTGTTCAATTTGAAAGGAGTTGCATTGGGTAATCCTGTCTTGGAATTTGCTACTGACTTCAATTCGAGGGCTGAGTACTTCTGGTCTCATGGCCTAATATCAGACTCCACCTACAGAATGTTCACTTCTGTTTGCAATTATTCTCGCTACGTGAGCGAGTACTACAGGGACGGTGTATCACCAATGTGTTCAAGAGTCATGAGCCTTGTAAGTAGAGAAACCAGTAAATTTGTGGACAAATATGATGTTACCCTGGATGTCTGTATGTCATCAGTGCTCTCTCAGTCCAATATTATAAGTCCACAAGAAAATGGTGAGAAGATAGATGTCTGCATCGACGATGAAACTGTCAATTACTTAAACCGACAAGATGTCAGAACGGCTCTTCATGCCAGACTTGTTGGCGTTCACAGCTGGGATGTTTGCAGCACCATTCTGGATTATCAATTGCTTGATATAGAGATACCAACCATATCCATAGTAGGATTGCTTGTCAAGGAGAGAATTCCAGTCTTAATTTACAGTGGGGATCAAGATTCTGTTGTTCCGTTGACTGGAAGTCGCTCCGTTGTACATCAACTAGCAAACCAGATGGGACTGAACACAACTGTACCCTATAGAGTTTGGTTTTCAGGACAACAGGTTGGTGGATGGACTCAAGTGTATGATAACATCCTTTCATTTGCAACCATTAGAGGTGCTGCTCATGAAGCTCCTTTCTCTCAGCCAGAGAGATCACTTGTTCTTTTCAGGTCATTTCTTCAAGGAAGAGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g068880.2.1SL2.50ch06:42704211..42707018458-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g068880.2SL2.50ch06:42703929..427071283,200-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g068880.2.1.1SL2.50ch06:42706784..42707128345-2
exonexon:Solyc06g068880.2.1.10SL2.50ch06:42704238..42704361124-n/a
exonexon:Solyc06g068880.2.1.11SL2.50ch06:42703929..427039357-n/a
exonexon:Solyc06g068880.2.1.2SL2.50ch06:42706574..42706675102-2
exonexon:Solyc06g068880.2.1.3SL2.50ch06:42706387..4270648296-2
exonexon:Solyc06g068880.2.1.4SL2.50ch06:42705770..4270586293-2
exonexon:Solyc06g068880.2.1.5SL2.50ch06:42705607..4270568680-n/a
exonexon:Solyc06g068880.2.1.6SL2.50ch06:42705176..42705457282-n/a
exonexon:Solyc06g068880.2.1.7SL2.50ch06:42704957..42705081125-1
exonexon:Solyc06g068880.2.1.8SL2.50ch06:42704669..4270476193-1
exonexon:Solyc06g068880.2.1.9SL2.50ch06:42704451..42704568118-n/a
intronintron:Solyc06g068880.2.1.10SL2.50ch06:42704362..42704450n/a-n/a
intronintron:Solyc06g068880.2.1.11SL2.50ch06:42703936..42704237n/a-n/a
intronintron:Solyc06g068880.2.1.2SL2.50ch06:42706676..42706783n/a-n/a
intronintron:Solyc06g068880.2.1.3SL2.50ch06:42706483..42706573n/a-n/a
intronintron:Solyc06g068880.2.1.4SL2.50ch06:42705863..42706386n/a-n/a
intronintron:Solyc06g068880.2.1.5SL2.50ch06:42705687..42705769n/a-n/a
intronintron:Solyc06g068880.2.1.6SL2.50ch06:42705458..42705606n/a-n/a
intronintron:Solyc06g068880.2.1.7SL2.50ch06:42705082..42705175n/a-n/a
intronintron:Solyc06g068880.2.1.8SL2.50ch06:42704762..42704956n/a-n/a
intronintron:Solyc06g068880.2.1.9SL2.50ch06:42704569..42704668n/a-n/a
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Related viewsNone found
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