Sol Genomics Network

Solanum lycopersicum gene Solyc06g061000.2

Name Solyc06g061000.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc06g061000	Length 7,061

Description

Casein kinase II subunit beta-4 (AHRD V1 **** B6TGH2_MAIZE); contains Interpro domain(s) IPR000704 Casein kinase II, regulatory subunit

Location(s)

SL2.50ch06:38969939..38976999

GFF source

ITAG_eugene

From BOGAS: 1

Length: 7061

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc06g061000.2.1	SL2.50ch06:38969939..38976999	1,507	+	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc06g061000.2 SL2.50ch06:38969939..38976999
CATTACCCATCCGAAAAAATCGCCTAAGCAAAGCTAAGCTAAGTTCTTCCCGCCGGTGTTTATATATCACCTTCTCCGGTCACAATTCCTTCTCTGTCTCTCTCTAAAACATTCCATCAATAAGCATAGATTAGAGAGAGAAAATGGGATAACCTTCAATCCCCCTCACCAAAAACCCTAAGTTTCTCTCTCCTCGTTTCTCGGACATTGAAGCCCTAGGGTTCGAGTCCTGTTGTTTAATTGTCGTATAAGCTGAGGAGAGAGATATGTACAAAGAAAGAAGAGTTGGCGGTGGATCGAAGCCGGAGATGGGACGTGTAGGTGATAGGAAGAGATTAAATGAAGCCTTGGATAAGCACTTGGAGCGCTCATCTCCTTCTACCTCCACTACTACTGTCAGGGGTACTAATGGAAAGGATCATCGCTTTGCCCTGTCCAAATCCAAGGACCAGCTCAGAAACTCTGCTCCTCCTCCTCCTCCTGATAATAAGTGCTCTGATGGTATACACACTTTTTTTCCTTACATCCTATATTATAATGGTAAATTCATAGGGTGGAGTTTAAAATGTTAATGCATATATAGAAGGATGTATGTAGACATATTAGGTGTTCTGAAATGGAATGGAAATAGTCATATGTTGGAGTGAAGGGAGTATACTGTATTTATCTATTATGTTGGTTGTTATCTAATTAAAGTTTTAGGTTTTAGAGGTTGAAATTTGGCTGCACAATTTCATTTTTACTTTAATGGTTATGAAAATTAATTGGGAAGAGTAATTATGATCAAATTACATTTTAAAGCATGATGAGAAGATCAGGAGCAAGTGTTGAAGCTTGTTCTGCATTTGGTGACATTAAAGCTTCATGTGGCACCAGGTTGTTGATTCTAGTGTTAGTGTTGTTATTAATGGCTATGATCATATCATTCACCTTGTCTACTAAAATGCCTACTCCATTCCTACATCTCTAGCCTTGGTTCCTACCAATTTGGTTTCCTGGACACATGCTACATTGATCAACATGGTGCATAGGGACCACTTCGAGAGGATATGATGAAGCGCATGGTTTTTTTGGCTTTGGGGATATAAATGACGCAGGAGTGTCTCTTTTGGACATCACGGTAGCTTTTGAGCTGTTCATAGCTAACTTGAGCTTTCATAAGAGGGAGGAACACTTGGTGACCTATCGTAGTGTAGTGTCTAATGCACACACAGATTACCTGCTCCTTAGGAAGTGTGATTGAGGTTTTCTCAAAAAAGGAAGTGTGGTAGAGGTAACTGCGATGACCACAAGTTTATTTCGAGCGAGAATCTTACAACCATTATAAGCTCGTGGTTATGAATTTCGATATCAAGAGAAAAATGTAGAAGAGAACTTCATATGACCAGCCAAGGATTAGATGGGGAAGCCTGACTGAGGCCAAAGCTCAGGAGATTATGGATAATTTGGTGACTATAGGGGCTTGGGGCAGTTGTAAGTATGCAAATAGTATGTGGGCTAGTACAACTGACTGCATCAGAGTAGCAAGTCCCTGATATATCCTGATACAAGTGTTAGTTCAGCATGTTCGAGACTTGGGAATAAAAGGATGGTATCATTGCAACATCACCTATCCATTTGTGAGATATGAATGAAAACAAACTTCTAATGTTATTTCAAAGAGCGGATATGCACGTTACAATAAGCTTATAATCAGTAAATAAATTCAGACTTATCTTCCAGGATGAACATGGTAGCTTTCTTTAGCTATAATAAGTGAAACAATTCAGGAAAATCTTCATGCTTTTTTGCTCTTTTTTCTTTTGGCACTTCCTAGGGTGGATCATGGATGAGCATTTGTCACTTGCATGAGACTAAGCCATGCCATTTATTTTGTATCTGATTGCTTTATGAAGTCCTCACATTAATTATGCTTGATGGTTACAATTAAGGCCCTGATGTAGGACTTTCCTCCAGAAAAAAAGAAATAGAATATAAAAGGCATAATACATAAATGTGCCCCTTAACTTGACCTCATTTCACATTTATGCCCTTCAACTTTGGTTATGCACAAGTAGACACTTAAACTTGTATAAATTTGAACAAGTTAACACATGAGTCTTAAGTGGCACAACACATGAAGGACAAAATGATATGTAGGATGTCATGTAGGATATGTGCGTCTATTTGTTCAACTTTATACAAGTTTAAGTTTAAGTGTCTACTTATGCACACCCAAAGTTGAAGGGCATAAATGTGATTTGAAATCTAGTTAAAGGGCATATTTATGTGTTAATATAGAAATACAAGGCCCTGAAGTGGCACAACACACGTAGGACAAAATGATATGTAGGATGTCATGTAGGACATGTGTGTCTATTTGTTCAACTTTATACAAGTTTAAGTTAAGTGGCTACTTGTGAACACTCAAAGTTGAAGGGCGTAAATGTGATTTGAAACCTAGTTAAAGGGCATATTTATGTATTAATATAAAAATTCAAGGCCCTGATATATCTTGATAAGAAGAACGTAAGGTGTTGATATAAGACTCGTGTTTAGAGATTATTATGGCATTTACCCTTAGAATTTTCCAATCCAAGAGGATGATCATTCTGTGAGATACATAGTTAGTAACACACATTGAGTTCATTAAATGAACATCACTTGACCTCAGCCAAAAGGTCGAGAAAAGTTTCATTAAATGAGCATTGAAGAGGAAGATAACATGTATTCATTTTTCACTTTTGGCTAAAAAGAAAAGAGCAACTATAATAGGGAAAAGATAAAATTTAACACAAGTAGAATATCTTTTTTTCTTAAAATAAAATAAAATTTGAACACAAGTAGAACATCTTAAATAGCTTGTTCCTCATCGGATCCTTTTGTAGTCTTTTGTTTAGATGGTAACAAATTTTATATAGTCTAAAAGCACAAAGGTTGTACTGGCCATAATTACTGGAAAAATGTATCACAATATACATTAGAAATTTCTATCTCCTTACAGATATCCTAGAGCATAAAGAATAGCTTCTGAATCTCTTGTGGTTCTTGTTTTACACCAAAAATAGAACAGCAGCACATAATGCATTTTTATCTTCTGGATTGAACTACCATCTTCAAAACATCTTGAGATCCTTTCTTTCCACATAATCCTTCTTTAGTATTAAAAGTTGGTAATAATAAGATAAATGTTTGGAATTTTGAGGACTTCAATTGGCTGGTTTTGACCAGTGAATCAGTGAACTAGGTGTTTTAATAAGGAATATATAGGTTTAGTCCATGGGATCAGCTGAATGAAGCACCTTTTAAATTTCCCAAACACTCCAAAAGTGCTTGAAAGCTATTTTGGCTTAAAAGCACAAGCCAATCAAAGCAGGCTCTTAATCCATAAGCTCAGATTCATGTCTTATAATTTTAAGATTTGCTAAGCAGTTTAACTGATTTTGTCCAGTTATGAAACTAAATTTTCTTGTAGTTTTTACTTTTGTTTTCCATTTGCAGCAGAATCTGAAACAGACAGTGAGGCATCAGATATTAGTGGTTCTGATGGAGAAGACACTTCATGGATCTCATGGTACTGCGGTCTACGTGGGAATGAGTTCTTCTGTGAAGTTGATGATGACTACATCCAAGATGACTTTAACCTGTGCGGTCTAAGCAGCCTCGTACCATATTATGACTATGCACTTGATCTGATTCTAGACGTCGAATCTTCTCATGGTGAGTTTTCTCTTTCCATATTGTGACCACTTCTTTCTGCTGTGTACTGTGATTTGCAAATTGCACATCTGGGTATCTAAGGTTACGGTCTGTCATGATTGGCTTGTTCCTCGCTGTCTCCTGAGTGCACTAGAAATAAGTTCATGAATTAGCTTTGCGTATTATTGGGGGTCGTTTGGTAGGGTTTATAAGAATGGTGCTAAACAATATATATGATAATGCTCGTGTTATTTCTTATTCATTGTTTGGATTGGTGTGTTAAAAAAGGTTTTGAGGGGAAATTGATTCGTTAACCATGCTAATGGATGCATTAAATCCCCTTGCATTACTATATCATGGTTTTCCATGTATTAATAATACACAAAAGACTGAATAACTAATGCTTGTATCAGTTATACAAAGATTGAAGAAGTACCTAACAAGTTACTATTAATACACAAAGCTAATGAATGTTTGGTACACTTTTTCAACCAATTTGGTATTAAGGTATGTACAACTAATACATGGAAATCAACAGTATTAGTAATGCAAGGGGTTCCAATGTATGCATTAGCATGATTAAAGACATAGGTGCTTCTGGAAAAAACCACCTCCACCTACTTGTGGAGGGTATTTTGTAAACAATTTTTTAGAAACTATGCAATGCCTGTTATTTTCAATACACCAAACCAAACACTACATAAGAAATAGTCTCAGCATAATTAATGCAAGTATAACTAATGCACTATTTTTATGCACCATACCAAACAACCCCTTGATCTATAGCAGTTGTAGTTGATGAAAATTAGACGGACCAAATTACAAATGGTTTGACATTTAGAGAGATTTGTTTGCCGTCATGGATCTAACAATAATAATAGCTGATATTTGTTACTTTCAGGTGGAATGTCTTAATAATCTGTATTGCTAGCATTAAGATGATTGTTTCATTACTAACAATTAAAATAAAAAAAGACATGATTGTGTATTAGTTTCCCATGTGTATTGTTCTTGCCGTACTAGTGTGCATCTGGATGCTTCTTATGCTTTGCTAGTTTGAAGGTAATCATGTCTTCTTCTATGAGTTTTAAAGGACGCCAGAGAGGTGTATTTGTATATAAGTTCTCTGAAAGTAGAGGTTGATTTGGTGACTGTTCAAAGTGATAGCTCCCCAGCTTTTACTGAGCATGAAGGCTGGTTTTGTTGACTTAGCGTCCTGTATAATTTTATATTCTTGTCATAAATATGCTCAAGTATTAACATTGGAGCTGTATTTTGTTGAAAGTAAACATCTTATTTGGATAAGACTGTTTAGAGTGGGGTTTGTAATTGGTATTTTCTTATATCTTAAGAGGAGAACTTTGGTGTTCTATAGTTACCTCAGTAGTAATTTTGAAGAATTTTCTCTATATAAGATTTTAGCAAATTAGAGATATGTGCTTGTTCTGAGAAACATTTCTCCATGCCATTATAGAAGACATGTTCACAACGTTAGGATTTAAAAAGGTCCTCTGCCTGTTATCTTGTGGTAGTTTCTCAAAGGTCATATGATCGATGAGAATGCCTGAAATGTGTAGGTGATATGTTTACAGAAGAACAGAATGAACTAGTTGAATCAGCAGCAGAGATGCTTTATGGTCTAATACATGCCCGCTACATCTTGACAACAAAGGGACTCGCTGCTATGGTAAGAATTTTTGTAGCATTGAAAATTATATGTGGTCATAGCTATAATAATTGGAAGGTATCTGGTCTTTTCAGTTAGAGAAGTACAAGAATGCTGAGTTTGGGAGATGTCCTAGAGTTTACTGCTGTGGACAACCATGCCTCCCTGTTGGCCAGTCAGACATTCCTCGACAAAGCAGAGTGAATATATACTGTCCTCGATGTGAAGATGCGTATACACCTCGGTCAAGATATCATGAGAGTATCCTTTTTGTTCTGCTTTGTTATTTCTTAATGCAACCATCAACATACTGTCTGCATTCTGTCATCTTGCCCCCTTTTCCTTTCATCTGAAATGTGTAAAACTAGGAACTTGAATGTTGTGATTTGAAAACAAAGGAATACATGAATGTGGTTTGCACGTCTCACCTACCATGAGAAGTTGGCATAATCCATTATCCTTACCTCTTTTCTTTTACCTCCATCAATTTCAATTTCTCAAGTTCCCTGTCATTTGCTATTTACTAATAATCCAAAACAAAAGGAATCTGAAGCCTGTCTTTTTCTTTAAGGTTCAAAAGATAGTGCAGTAGAACCATGTCTTGTATCTCCCTACCTTGAATTGAGATTGGATCTTTCATCTCGTAGTGAAAAGTTTTAGAGGATACTGGTGTTCTGAGAAAATTGGGAAGTTTAATTTACCTTAGAGTTGGCAGCAATTTTTGTCATGTTAGCTTTTATTTGAGTCTCTTTTAATACTGTCAGAGATTTATATGCCAGTAGATAATATAGAGAACTTGCAGTATGTTTTTTTTTTGTATAATATTGTCCTGAGATGAGCTTAAATAGAGTCGCAATGTAAACGAGGGTAATATAGCTAACCCAACTTGTTGGGACTGAGACATAATTGTTTTGGTAGCATTTTGAATATCGGAAGATCTTAAAGAGTAAACGGTATCTTAGTTTCGAACCTTTCTTCCACAACAGCCACCATGTTTATTTTTCTCGTATTTTCTTTGAAATGCATCAAACAAGTTGTGGATGGGTGGACAGATTTGAAGAGGGAATCAATCTGTAAATACTATTGAACTGTCCGACACATTTAGACATTTTCTCCCAAGCAAGGCAGGGATGATGTTTTATTTTCTCCTCTTCATTTTTGCATATATATCAATGTCTCTTTTGCATTTCCTTTACTATGTCAAAGACATTGATGGAGCTTACTTTGGAACCACATTTCCGCACCTGTTCTTGATGACTTATGGACATCTCAAGCCACAGAAGATTTCTCAGAGCTACGTTCCCAGAGTTTTTGGTTTCAAGGTCCACAAGCCTTGATCCTGGTAGTGTTACCTACTGTCTATGTTTTCCTTATTAATGTGCTAGCAGAGGTAATGCTTTTAATAGCACATGTAGAATTGTAAGGTTCTGTTATAGGTTTTATTCTCATACAGGCTTTGGAAGATGCTGTGTGATAACAAATTTACTTGGACTACGTTTATGTATGAATACAATTCTCCCTTGCTACAGTTTGTGCTTTTTTTGTTACCCTGTGAGGATCTCTCAAATACTGCGTTACAAACTATTCTGTAGCGTGATTTGTATGTCAATGTACACCCAAGTATCGCAACTTGGATTTGACACATAATATTTTTTTTGTACATACACTTGACTTTTGGCCTGGGGTTTCAATTGAATGTCATTGTGTTTTCTTGAGT

Download sequence region

Download sequence (6.9Kb)

Get flanking sequences on SL2.50ch06

mRNA Solyc06g061000.2.1

Ontology terms

terms associated with this mRNA

GO:0019887 – protein kinase regulator activity

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc06g061000.2.1	SL2.50ch06:38970204..38976619	287	+	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc06g061000.2	SL2.50ch06:38969939..38976999	7,061	+	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc06g061000.2.1.1	SL2.50ch06:38969939..38970439	501	+	n/a
exon	exon:Solyc06g061000.2.1.2	SL2.50ch06:38973419..38973637	219	+	n/a
exon	exon:Solyc06g061000.2.1.3	SL2.50ch06:38975194..38975303	110	+	2
exon	exon:Solyc06g061000.2.1.4	SL2.50ch06:38975378..38975543	166	+	2
exon	exon:Solyc06g061000.2.1.5	SL2.50ch06:38976489..38976999	511	+	n/a
intron	intron:Solyc06g061000.2.1.1	SL2.50ch06:38970440..38973418	n/a	+	n/a
intron	intron:Solyc06g061000.2.1.2	SL2.50ch06:38973638..38975193	n/a	+	n/a
intron	intron:Solyc06g061000.2.1.3	SL2.50ch06:38975304..38975377	n/a	+	n/a
intron	intron:Solyc06g061000.2.1.4	SL2.50ch06:38975544..38976488	n/a	+	n/a

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Related views

Genetic loci

Tomato locus Solyc06g061000

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17848867%2Fdetails feature 17848867

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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