Sol Genomics Network

Solanum lycopersicum gene Solyc06g051350.2

Name Solyc06g051350.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc06g051350	Length 2,819

Description

Os03g0291800 protein (Fragment) (AHRD V1 **-- Q0DSS4_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant

Location(s)

SL2.50ch06:34662515..34665333

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2819

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc06g051350.2.1	SL2.50ch06:34662515..34665333	1,456	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc06g051350.2 SL2.50ch06:34665333..34662515 (sequence from reverse strand)
CACCAAATACTTTTGGTAACACAAAAATAAAAATTCTTTAATATAAATATAACCAGAAAAAGAAAAAAAAGTTAGGGATGCTATTTTTTTGTTTATATTTTCAATTATTAGCAGTTAGTGGCATTTCCCATCTCAACAGACAGACATGAAGCACGGCGGACAGAAGAACAATAACCTGTCAATAGTCGTTGTGGTTTTCTCCATATTCTTGTTTAGTTGTTTCATATACAACGAAGATTTCAAGTCCATAGCAGAATTCCCATTCTCAAGACCCAAAATTCAATTAGAAAGTGATGAAAACAGAGTTTCACCATCAATGGTAATGAACTCAAGGACGATAGTCGAGACAGAGATAGAACAGAGCATTGAAATGGCTGAGGATGAGAACATTGAATTGCCACCTGATGATTGCGATCTGTTTACAGGGAATTGGGTTTATGATAATATAAGTCACCCAATTTACAAAGAAGATCAATGTGAGTTCCTTACTTCTCAAGTTACTTGCTTGAGGAATGGAAGAAAGGATTCTATGTATCAGAACTGGAGATGGCAACCCAGAGACTGTTCTTTACCCAAGTAAGACAAATAATATCACCAGTTCGAAATTGTTTAGGGAGGTATTTGTCAGCTATTACGTACTTTATGTGTTTACTCATTTAATTAAAAAGAATTTCAGGTTTAAACCAAGATTGCTTCTTGAGAAATTGAGGAACAAGAGACTCATGTTTGTAGGAGACTCATTGAACAGGAATCAATGGGAATCCATGGTTTGTTTGGTTCAATCTGTTGTTCCTTCTGCCAAAAAAAGCCTAAACAAAATTGGTTCTTTATCTGTTTTCACAATTCAGGTAATCCTATATTTCTATGTAGTATTGATACACTTATTTAAGAAAATAACAATTGATATAATAAATTTACTATCTTACGTTTATTAATTAATAAAAATTTAACATCAAAATTTCATTAAAAAAATTTAATTTTTCAAAACATTAACCTTCTAAACAATTAAGAATATAGTTGATAAAAGATGCTCCATAAAAAGGGATAGAGGAGAGGAAGTAGCTAGTAGGAACTTCTTTAAAAAGATTGATTCTCTCTAAAATATAATGATTATGTTTTTCCTTTCTTTAGTTTGATAAGACTTTAATGCTATAATTAAATTCTATAATGTTAAATACTTTTGTATCAATTAAGATCACTTTAATGTTAACAAACTAATTAATTATCCCAAATAAGTATGAACTAGCGTGCTTTAAAAAAGCATCTCCACTAGTCAATTTTATGATGTACTGTTGCGTACTAAATAATCTTGATTAGTTGGATACGTCACCACTGCGTAATAAGAAAGATTCATAGTCTATTTAAACCTTTTTTCACCTAATATTGGTGAAAGGTTCTAAATTCTAATAGTGGTTTGATTATAGGAAAATTCAGTTGTAGACATTTAGTGTATATATTCGATTAATCCTTTCGGTTGGATCATATGATTCACATTACTTTTTATTCTGTAAAAAAAGATATATTCTTATAATAAGTACTTCCTCTATTTCAATTCAATTATTTTTAGATTTTAAAATTCAACTAAGTCTATTTTTAAGTAATTTTTGAAATAAGTCTATTTTGATTGTTAATTATTGTGACTTATGATACTTTTTACGTAGTTTACAAATATATAAATTTTATTTCAAAAAATTGAGCAAATTCTCGATCAAACTGAAATCGTTTGGTTCTTCAAAAAATGAAATGTGTCACATAAAATGAGTAGAAGGAGTATCAATTTAACTTTAAAATGTTTATTTACCTTGAATGAAATGACATATAGCTACACAAACATCGATAACTTATTTTAGACCACAAATTTCAAAAAAAATTTCTGTTCAAATTTAAGCAAGACTAACTCATATAAAATAAGACCGAGGGAATAACTTTTTAGGTCTTTTAACAACATATGCAGGATTACAATGCCACGGTGGAATTTTATTGGGCTCCATTTCTAGTAGAGTCAAACTCGGATGATCCAAATATGCATAGCATCTTGAACAGAATCATCATGCCTGAATCTATCGACAAGCATGGCAACAACTGGAAGAATGTTGACTATCTCATCTTCAACACATATATTTGGTGGATGAACACTTTCTCTATGAAAATTCTGTAAGTAAAATAACTCACCAAACAAATTAATAATTCCAAATTTCAAACAATTATTGTGTGATTTTGTGTTTCCTACCCAACAGACGAGGATCGTTCGATGAAGGAGCAACAGAATACGATGAGACAGACAGACCAACAGCTTATAAGAGAGTGTTGACAACTTGGTCCCAATGGGTCGATAAAAATATAGATCCCAATCGCACCCAAGTCTTCTTCATGAGCATGTCTCCTCTTCATATCAAGTAAAAACAAATCGTTTTCTTTTGAATTTTCATTGACATTAATGATGAAATATACTAATTCGTTATTTAAATAGGAGCTTTGATTGGGAAAATCCTGATGGAATAAAATGTGCAAAAGAGACATCGCCAATACTGAACACATCAATGCCACTAAATGTTGGAACAGATAAAAGGTTGTTTGTGATAGCAGCAAATGTGATTAGATCCATCAAGGTTCCAGTATACTTTCTCAACATTACAACATTATCAGAGTATAGAAAAGATGCACACACATCAGTTCACACAATTCGTCAAGGCAAAATGCTAACGCCTGAACAACAGGATGATCCTGCAACTTATGCTGATTGTATACATTGGTGCCTCCCTGGATTGCCCGATACTTGGAACGAGTTCCTTTATTCACGCATTGTTTCACATTCTTGA

Download sequence region

Download sequence (2.8Kb)

Get flanking sequences on SL2.50ch06

mRNA Solyc06g051350.2.1

Ontology terms

None

terms associated with this mRNA

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc06g051350.2.1	SL2.50ch06:34662514..34665188	437	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc06g051350.2	SL2.50ch06:34662515..34665333	2,819	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc06g051350.2.1.1	SL2.50ch06:34664758..34665333	576	-	n/a
exon	exon:Solyc06g051350.2.1.2	SL2.50ch06:34664486..34664657	172	-	1
exon	exon:Solyc06g051350.2.1.3	SL2.50ch06:34663180..34663379	200	-	n/a
exon	exon:Solyc06g051350.2.1.4	SL2.50ch06:34662938..34663096	159	-	1
exon	exon:Solyc06g051350.2.1.5	SL2.50ch06:34662515..34662863	349	-	1
intron	intron:Solyc06g051350.2.1.2	SL2.50ch06:34664658..34664757	n/a	-	n/a
intron	intron:Solyc06g051350.2.1.3	SL2.50ch06:34663380..34664485	n/a	-	n/a
intron	intron:Solyc06g051350.2.1.4	SL2.50ch06:34663097..34663179	n/a	-	n/a
intron	intron:Solyc06g051350.2.1.5	SL2.50ch06:34662864..34662937	n/a	-	n/a

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Related views

Genetic loci

Tomato locus Solyc06g051350

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17845120%2Fdetails feature 17845120

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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