Sol Genomics Network

Solanum lycopersicum gene Solyc06g050920.2

Name Solyc06g050920.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc06g050920	Length 2,641

Description

Os03g0291800 protein (Fragment) (AHRD V1 **-- Q0DSS4_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant

Location(s)

SL2.50ch06:33798570..33801210

GFF source

ITAG_eugene

From BOGAS: 1

Length: 2641

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc06g050920.2.1	SL2.50ch06:33798570..33801210	1,599	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc06g050920.2 SL2.50ch06:33801210..33798570 (sequence from reverse strand)
TTATATTATCTGACGAAGAAGAAGAAAAACAGAGTCACTCTGCTGCCAAAGGCTTCAAAGCAATGAAGCCGCCTCCCTCTTCTTCTTCGATTGTTCGAAAGAATCGTCTTTCTCCTTTCCTATTCACTCTATTAGCCTTCATTGTTTTTGTCACCATTCTTTATAGTGAGGATTTTAGCTGCATTTTTAGCCAGCTTGAGTATTCTAGTCTATCTGCTCCTCCCAATTCAATCTCAAGAATCAGTAAGTAACTAACTATTAACGCAATTGTACTTCTTTAAAATTGGATGTTGAAATTGAATGTGTTTCTTGTAGACAAGAACAAGAAGTTACCATTTGCCATTGGAGAGACAGAGGATGGCTGTGACGTGTTCAGTGGTAGGTGGGTTCATGATGATAGCCGGCCACTGTACGAGGAAGAGGAGTGTCCTTACATACAGCCACAATTGACTTGCCAAAAACAAGGCAGGCCAGACAAAGATTATCGACAATGGAGATGGCAACCTCATGGTTGTTCTCTTCCAAGGCACGTTTAGATTTTAACTCTATTTTTCTCATATTCGCTATCTAGTTATCATTAGCCCACCAACATATTATTGGACATTAGTTATAGTTATAATTAAGTGACACTTGCAATATAATTCTTTAACTTGATCAAGTTGATGGATCAGGATCACTGGAAGAGCAAAAATTTTCATAGAGTTCAAAATATGAAGGAATAAACACACCAACTAGTCGATGGGCGTTCAACATATAATGTGTATACACAAGCAATAATTTTAATCATTTATAAATAACGTAATTTTCCGTTGAAGAGAGATTCAGACGAAACCCCTAGCTCTTGGTCAGGATGATGTAAGATCTAAGCATTCTGTAGTTACTATTACAATACATGAGAGTAAAAAATAAGTACTTGCGTATATTGTTAGCATATTTTAGAATCCAAACTCAATAACCTTTAAGCTCTGGATCCATCACATACATGTGACATAAAGAGCGAGGCCATGAAGAAAACCCTGAGTTGATTGCTAGTTACTCGCCGCTACCTATTTTTGGTTTTGAGAAATGATTATTGATAGTTAATCTGGTTAATTTCTACATTATACTCTTCGTCTTTGAAAATGTTGGTTTATTGTGTACTTCAAGTTCTCTGTTTCATATTCGGATTTAGAAGGCAAAGATTATGGTATTTCAATGATATGATCAATGATTTAGCTACACTTCCATAATATTGCAGTTTCAACGCGACACTAATGTTGGAAACACTTCGTGGGAAGAGGATGTTATATGTGGGAGATTCGTTAAACAGAGGACAATATGTTTCGATGGTTTGTCTTCTCCATAGACTCATACCTGAGAATGCCAAGTCCATGGAAACTTTTGGTTCCCTCACTGTTTTCACTGCTAAGGTGCTGTCATTTTAAAGTTACATATAAAATTTTATGTCTAGCTAAGTTGATTTTATCAAATGTTTCGTTGCTTGAACCAAATCAATACTGCAGGACTACAACGCGACTATTGAATTCTACTGGGCACCATTTCTTCTAGAATCAAATTCAGACGATGCAGTTGTACATAGAATATCCGATAGAGTAGTACGAAAAGGCTCCATCAATAAGCACGGAAAGAATTGGAAAGGCGCTGATATAGTCGTTTTTAATACTTACCTTTGGTGGATGACTGGCCTAGAATTCAAGATTTTGTAATCATCTATCGCCTTTCATTTCATTCGATTGTGTTTCTTTCCTCTATTTTTACTAATGATATAAACATGAAATTGACACAGGCAAGGGTCTTTTGACGATGAAGTGAAGGATATAGCAATGGTATCGACAGAGGATGCATATCGAATGGGAATGAAGAGTATGCTGAGATGGGTGAAAAAGAACATGGATCCAAAGAAAACCAGAGTTTTTTTCACTAGCATGTCACCTTCCCATCAAAAGTAACAATTCAATTTTCTTCGAAAAGTAATAAAATTTGAGGGTAAAATATAAAATGTATGAATATCATTATTTTTTTTACAGGAGCATAGATTGGGGTGGAGAACCAAATAAGAACTGTTACAATGAAACAAGAATGATCGAGGATGAGAGTTACTGGGGATCAGATAGTAGAAAAAGCATAATGGAAGTGATTGGACAAGTGTTTCGTAGATCAAAGGTGCCGATTACATTTCTCAACATAACACAACTCTCGAGTTACAGAAAAGATGCACATACATCAATTTACAAGAAGCAATGGAGTCCATTAACAGCGGAACAATTAGCGAATCCAGTTAGCTATGCTGATTGTGTACATTGGTGCTTACCTGGTCTTCAAGATACATGGAATGAGCTTTTGTTTGCTAAACTTTTCTATCCTTGATATCATCCACCACAACACAATTTTTATCTACTACTAGTACAGCTAATTTTTCATTCTTCTCCCACATAAAATTGGTCAAAACAAAAAAGAAGAAAAAACTGTGTATAAATGTAATGATTCTGCAAAGATAAAATCTTGCAAAATGTGAAAAAGAATTATTGCAAAGAGAATTGCTTGGCAATATTATCTTTTCCAAGAATTGGAGCATCATTACTTGTCCTATTTGATTTTTGGTTTCATTTTTCCACAAGGAATATAATTCTATTATATTTTC

Download sequence region

Download sequence (2.6Kb)

Get flanking sequences on SL2.50ch06

mRNA Solyc06g050920.2.1

Ontology terms

None

terms associated with this mRNA

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc06g050920.2.1	SL2.50ch06:33798843..33801148	421	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc06g050920.2	SL2.50ch06:33798570..33801210	2,641	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc06g050920.2.1.1	SL2.50ch06:33800968..33801210	243	-	2
exon	exon:Solyc06g050920.2.1.2	SL2.50ch06:33800685..33800895	211	-	1
exon	exon:Solyc06g050920.2.1.3	SL2.50ch06:33799802..33799973	172	-	n/a
exon	exon:Solyc06g050920.2.1.4	SL2.50ch06:33799509..33799708	200	-	1
exon	exon:Solyc06g050920.2.1.5	SL2.50ch06:33799266..33799424	159	-	1
exon	exon:Solyc06g050920.2.1.6	SL2.50ch06:33798570..33799183	614	-	n/a
intron	intron:Solyc06g050920.2.1.2	SL2.50ch06:33800896..33800967	n/a	-	n/a
intron	intron:Solyc06g050920.2.1.3	SL2.50ch06:33799974..33800684	n/a	-	n/a
intron	intron:Solyc06g050920.2.1.4	SL2.50ch06:33799709..33799801	n/a	-	n/a
intron	intron:Solyc06g050920.2.1.5	SL2.50ch06:33799425..33799508	n/a	-	n/a
intron	intron:Solyc06g050920.2.1.6	SL2.50ch06:33799184..33799265	n/a	-	n/a

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Related views

Genetic loci

Tomato locus Solyc06g050920

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17844644%2Fdetails feature 17844644

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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