Solanum lycopersicum mRNA Solyc06g050310.2.1
 mRNA details
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| Name | Type |
Length
1,447
|
Organism |
|
Description
Phosphatase/phosphohexomutase HAD superfamily (AHRD V1 **-- B3DWY3_METI4); contains Interpro domain(s) IPR005834 Haloacid dehalogenase-like hydrolase
|
|
Location(s)
SL2.50ch06:32920601..32928596
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| Ontology term(s) |
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GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0008152
- Length
- 7996
- Nb exon
- 11
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc06g050310.2.1 Phosphatase/phosphohexomutase HAD superfamily (AHRD V1 **-- B3DWY3_METI4); contains Interpro domain(s) IPR005834 Haloacid dehalogenase-like hydrolase
TAAAGATAAAAATGGAGGCCACTCGCAGTTGCTCTCAGGCTCACCTCCCTTTACAATCCATCTCTTTCCCTCCTCAATTCTACAAAAAGTTCCAATTCACGAAATCGAAGCCTTCCAACTCTCATCCACGCTTGGTGATTGCAAAGGCCTTGGGGACCGGCGATAATGGTGACTTTGAACATTTTACAGCTACACCTAACAAGATTTTTATGGAAGAGGCAATTGGTGCTGAATACGGAGAAGGTTTCGAGACATTTAGACCCAATGGACTGCTCAAAGTTGATGTGGATTTTTTAAATGATAGACTGCAAGAGGGTTTCCTGCGAAGAATCCGTTATGCGATGAAGCCTGATGAAGCTTATGGCCTGATTTTCTCTTGGGATAATGTGGTGGCAGATTCTCGAGCTCTGATGTTGGATGCCTGGAATCAACTTGCCTCTGAAGAAGGATTAGAGCTTCCTGAAGATGATAGTGTGCAGCGGCTGTTACTTTATGCAACTGCTGACCATATTCTGCATAAGGCGCTGGCAGGGGAGAAGAATGAAGCTGATCAAGATAGATTGAAGACGAGACTTTCCCATCTCTATCAGGACAAGCTTCTCAAAATTTCAGAGCCAATTGAAGGGTTAAAAGAATGGCTGGATGCTGTATCAACTGCTCGTATCCCTTGCGCTGTTGTGTCAAGTTTTGATCGCAGAAATATGGTTGAAGCCTTAGAGCGCATGGGACTCATGAAGTACTTCCAGGCAATTGTGACGGAGGAGGACGGAATGGAGTCTATAGCACATAGATTTCTTTCTGCAGCTGTGAAGCTGGACAGGAAGCCATCAAAGTGTGTGGTATTTGAAGACGATCCTAGGGGCATAACTGCTGCTCACAACTGTACAATGATGGCTGTGGCACTTATTGGTGCTCACCCAGCGTACGATTTAGGGCAAGCTGACCTAGCTGTAGGTAGCTTCAGTGAGCTTTCTGTGATAAATCTCAGGAGATTATATGCACATAAAGGCTCCAACTTTATGGACCTAGAGAAGCAAATAGCGGAAAAAGCACCGCGCAGAAGGAAGCTCACAATTGACACCATTTTCTGAACCAGTTTGGTACAACAGTCTACCACCTCCTTTTCCTACTTGTAAATGCCCTTTTAGTGTTAGAATCTGTAGGTCTTGCCGTCCTTTGCCTTCTTTCATTCTTGAGATAAATAGAGCTGGCAGAAGATGATTTCCCTTGGGGTAATCTGAAACTCAGGTGTCCTTTTCTTGTCTTCTTTTCTCTCTCTCTTTTGGGGTTTCTGCTTGTTCGTGTTATCAAGCCGTTATTCAAACTGATATCTACCAGCACTGGTGGTGGAATTATGATCCATGTCGCAACTAAATAGTTGCTTTTAGGTGCATGCAATATTGTAACTTTTGCCAATTATATATAATATATGAAAAGATTGAACTTA
TAAAGATAAAAATGGAGGCCACTCGCAGTTGCTCTCAGGCTCACCTCCCTTTACAATCCATCTCTTTCCCTCCTCAATTCTACAAAAAGTTCCAATTCACGAAATCGAAGCCTTCCAACTCTCATCCACGCTTGGTGATTGCAAAGGCCTTGGGGACCGGCGATAATGGTGACTTTGAACATTTTACAGCTACACCTAACAAGATTTTTATGGAAGAGGCAATTGGTGCTGAATACGGAGAAGGTTTCGAGACATTTAGACCCAATGGACTGCTCAAAGTTGATGTGGATTTTTTAAATGATAGACTGCAAGAGGGTTTCCTGCGAAGAATCCGTTATGCGATGAAGCCTGATGAAGCTTATGGCCTGATTTTCTCTTGGGATAATGTGGTGGCAGATTCTCGAGCTCTGATGTTGGATGCCTGGAATCAACTTGCCTCTGAAGAAGGATTAGAGCTTCCTGAAGATGATAGTGTGCAGCGGCTGTTACTTTATGCAACTGCTGACCATATTCTGCATAAGGCGCTGGCAGGGGAGAAGAATGAAGCTGATCAAGATAGATTGAAGACGAGACTTTCCCATCTCTATCAGGACAAGCTTCTCAAAATTTCAGAGCCAATTGAAGGGTTAAAAGAATGGCTGGATGCTGTATCAACTGCTCGTATCCCTTGCGCTGTTGTGTCAAGTTTTGATCGCAGAAATATGGTTGAAGCCTTAGAGCGCATGGGACTCATGAAGTACTTCCAGGCAATTGTGACGGAGGAGGACGGAATGGAGTCTATAGCACATAGATTTCTTTCTGCAGCTGTGAAGCTGGACAGGAAGCCATCAAAGTGTGTGGTATTTGAAGACGATCCTAGGGGCATAACTGCTGCTCACAACTGTACAATGATGGCTGTGGCACTTATTGGTGCTCACCCAGCGTACGATTTAGGGCAAGCTGACCTAGCTGTAGGTAGCTTCAGTGAGCTTTCTGTGATAAATCTCAGGAGATTATATGCACATAAAGGCTCCAACTTTATGGACCTAGAGAAGCAAATAGCGGAAAAAGCACCGCGCAGAAGGAAGCTCACAATTGACACCATTTTCTGAACCAGTTTGGTACAACAGTCTACCACCTCCTTTTCCTACTTGTAAATGCCCTTTTAGTGTTAGAATCTGTAGGTCTTGCCGTCCTTTGCCTTCTTTCATTCTTGAGATAAATAGAGCTGGCAGAAGATGATTTCCCTTGGGGTAATCTGAAACTCAGGTGTCCTTTTCTTGTCTTCTTTTCTCTCTCTCTTTTGGGGTTTCTGCTTGTTCGTGTTATCAAGCCGTTATTCAAACTGATATCTACCAGCACTGGTGGTGGAATTATGATCCATGTCGCAACTAAATAGTTGCTTTTAGGTGCATGCAATATTGTAACTTTTGCCAATTATATATAATATATGAAAAGATTGAACTTA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc06g050310.2.1 | SL2.50ch06:32920956..32928585 | 360 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc06g050310.2 | SL2.50ch06:32920601..32928596 | 7,996 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc06g050310.2.1.1 | SL2.50ch06:32928496..32928596 | 101 | - | n/a |
| exon | exon:Solyc06g050310.2.1.10 | SL2.50ch06:32921428..32921537 | 110 | - | 1 |
| exon | exon:Solyc06g050310.2.1.11 | SL2.50ch06:32920601..32921125 | 525 | - | n/a |
| exon | exon:Solyc06g050310.2.1.2 | SL2.50ch06:32928304..32928420 | 117 | - | n/a |
| exon | exon:Solyc06g050310.2.1.3 | SL2.50ch06:32925330..32925398 | 69 | - | n/a |
| exon | exon:Solyc06g050310.2.1.4 | SL2.50ch06:32925116..32925220 | 105 | - | n/a |
| exon | exon:Solyc06g050310.2.1.5 | SL2.50ch06:32924052..32924106 | 55 | - | 2 |
| exon | exon:Solyc06g050310.2.1.6 | SL2.50ch06:32922822..32922895 | 74 | - | n/a |
| exon | exon:Solyc06g050310.2.1.7 | SL2.50ch06:32922318..32922401 | 84 | - | n/a |
| exon | exon:Solyc06g050310.2.1.8 | SL2.50ch06:32922104..32922244 | 141 | - | n/a |
| exon | exon:Solyc06g050310.2.1.9 | SL2.50ch06:32921954..32922019 | 66 | - | n/a |
| intron | intron:Solyc06g050310.2.1.10 | SL2.50ch06:32921538..32921953 | n/a | - | n/a |
| intron | intron:Solyc06g050310.2.1.11 | SL2.50ch06:32921126..32921427 | n/a | - | n/a |
| intron | intron:Solyc06g050310.2.1.2 | SL2.50ch06:32928421..32928495 | n/a | - | n/a |
| intron | intron:Solyc06g050310.2.1.3 | SL2.50ch06:32925399..32928303 | n/a | - | n/a |
| intron | intron:Solyc06g050310.2.1.4 | SL2.50ch06:32925221..32925329 | n/a | - | n/a |
| intron | intron:Solyc06g050310.2.1.5 | SL2.50ch06:32924107..32925115 | n/a | - | n/a |
| intron | intron:Solyc06g050310.2.1.6 | SL2.50ch06:32922896..32924051 | n/a | - | n/a |
| intron | intron:Solyc06g050310.2.1.7 | SL2.50ch06:32922402..32922821 | n/a | - | n/a |
| intron | intron:Solyc06g050310.2.1.8 | SL2.50ch06:32922245..32922317 | n/a | - | n/a |
| intron | intron:Solyc06g050310.2.1.9 | SL2.50ch06:32922020..32922103 | n/a | - | n/a |
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