Solanum lycopersicum mRNA Solyc06g009290.2.1

mRNA details  
Name
Solyc06g009290.2.1
Type
mRNA
Length
4,423
Organism
Solanum lycopersicum
Description
Lipid A export ATP-binding/permease protein msbA (AHRD V1 *--- MSBA_SYNAS); contains Interpro domain(s) IPR003439 ABC transporter-like
Location(s)
SL2.50ch06:3249411..3257702
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0017111
  • GO:0016887
  • GO:0016021
Length
8292
Nb exon
14
Sifter term
  • GO:0010329
  • GO:0008559
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g009290.2.1 Lipid A export ATP-binding/permease protein msbA (AHRD V1 *--- MSBA_SYNAS); contains Interpro domain(s) IPR003439 ABC transporter-like

ATGTTAGTCCATAAATATTTAATGGAAGGTGACACTTATTTAGTTGTAGAATCACGGATTCAAATCTGGATTCTTATTGTCGATCCGCTGTCATGGCAATTTCCTGGCACCAAATATAAAGAGACGGCAGCCGGTAGAGAAAAGGAAAAGAAAGTGTCTTCAACAGCTCCATTTGAGAAATTAAGTAATCATTTCTTACAAGGAAATTCAAACTTTACAACACAAGTAAAGTGCACTGCCAGAAAAGCAGGAACCCACAACTGTACAACTTTACAAATACATAACTTTCAACAACTGTCAGTCAGTCTGAATCTGAAGGAGAAGAAACTCAGATCAGCTATGGCTGAAGGGAACAGTAATGGAAATTCAGGACCCAATGAAGCCTCTTCATCATCAGGAGGGCAAAACAATACAAGCCAGCAGGATTCAGACAAGACCAAACAAGCGGAGAAAGCTAATACAGTTCCCTTTTACAAGCTCTTCTCGTTTGCTGATTCCACTGATATGGTCTTGATGATCACTGGAACTATTGCAGCTATTGGCAACGGATTGTCCCTGCCCATTATGACAATTCTTTTTGGAGATTTGACAGACTCCTTCGGACAAAACCAAAATAACAAAGATGTGGTTCGCGTAGTCTCCAAGGTCTCACTGGAGTTTGTCTACTTAGCTTTGGGATGTGGGGTGGCCTCATTTCTTCAGGTTGCTTGTTGGATGATCTCCGGTGAAAGACAGGCTTCTCGAATAAGGAGTCTCTATCTGAAAACTATTTTGCAACAAGATATTGCTTTCTATGATAAGGAAACAAATACGGGAGAGGTGGTTGGACGGATGTCTGGTGACACTGTTCTTATACAAGACGCAATGGGTGAGAAGGTAGGGAAATTTGTACAGCTGATATCAACATTCATTGGGGGCTTTGTCATTGCATTTACCAAAGGCTGGCTTCTCACACTTGTCATGTTATCCGTCATTCCTCCACTTGTCATATCTGGTGGAGCAATGTCCCACGTTCTATCTAAGATGGCGTCCAGTGGACAAGATGCTTATGCCAAGGCTGCAACGGTGGTTGAACAGACAATTGGATCCATTAGAACGGTTGCATCATTTACAGGGGAGAAGAAAGCTGTGGCTGACTATAACGAGTCCCTAGTTAAAGCTTACCATTCAGGTGCAAAAGAAGGGCTGGCAACTGGATTAGGTCTTGGCTCAGTTTTTGCTATTATATACTGCAGCTACGCTTTGGCTATTTGGTATGGTGCAAGGCTCATATTGGAAAAAGGATATACTGGTGGTAAAGTTATCAATATAATAATTGCTGTGCTAACTTCTTCCATGTCCCTGGGGCAGGCAGCTCCCTGTATGTCTGCATTCGCTGCAGGTCAAGCGGCAGCTTTCAAAATGTTTGAAACCATAAAAAGAAAGCCGGAGATAGATGCTTATGATACCAATGGAAAAATATTGGACGACATCCGTGGTGATATTGAATTGAATGATGTGTGCTTCACTTACCCAGCCAGACCTGATGAACAAATTTTCAGTGGATTTTCATTATTTGTATCGAGTGGCACAACTGCAGCTTTGGTTGGGCAAAGTGGAAGTGGGAAGTCAACAGTCATAAGTCTAATAGAAAGATTTTATGATCCTCAATCTGGTCAAGTTCTGATTGATGGAATTAATCTCAAGGACTTCCAGCTTAAGTGGATCAGGGGAAAGATTGGTCTTGTGAGCCAAGAACCTGTACTCTTCACAGCAAGCATTAAGGAAAATATTCTGTATGGCAAGTACGATGCTACTGCTGAAGAGATCAAAGTTGCAACTGAGTTAGCAAATGCCGCAAAGTTCATCGATAAACTCCCACAGGGTCTAGACACCATGGTTGGAGAACATGGAACTCAACTTTCTGGTGGGCAAAAGCAAAGAATTGCCATTGCCAGAGCAATTTTAAAAGATCCAAGGATATTACTGTTAGATGAAGCAACAAGTGCATTAGATGCAGAATCTGAGAGAGTTGTACAAGAAGCATTGGATAGAATTATGATCAACAGAACAACCGTCATAGTTGCACATCGATTGACCACAGTAAGAAATGCTGATATGATTGCAGTCATACATCGGGGAAAAGTTGTTGAAAAAGGTACACATGGTGAACTACTCAAGGATCCTGAGGGAGCATACTCTCAGCTCATACGCTTACAAGAAGTGAACAATAAAACAGATAAATCAGGCTTAGATGAGAGGGACAGCATAGAGAAGTCTATGGGATCTGGTAGACAGTCAAGTCAAAGAGTATCACTAATGCGATCTATCAGTCGGAGTTCATCTGGTGTAGGAAATAGCAGCCGCCGTTCACTCTCCATATCATTTGGTTTAGCTACTGGACTTAGTGTACCTGAAACAGCTAACACAGACACAGAAACGGGTATCCAGGAAGTAGCTGAAAAGCGGTTAGAGGTCCCCATTCGTCGCCTAGCATATCTCAACAAGCCTGAAATACCTGTGATGATTATTGGAACTGTGGCTGCAATTATTAATGGTTCTATACTTCCAATTTTCGGGATATTACTCTCTAGTGTGATCAAAACATTTTATGAGCCACCACATGAACTAAGGAAGGACTCAAAGTTTTGGGCTCTTATGTTTGTTCTTCTTGGAGGTGTAACTTTTATTGCCTTCCCTGCAAGGACATACCTTTTTAGTATAGCTGGTTGTAAGTTGATAAGAAGAATTAGATCAATGTGCTTTGAGAAGGTGGTCCGCATGGAGGTAGGATGGTTTGATGACTCTGAGCACTCCACTGGAATCATTGGCGCTAGACTTTCTGCTGATGCAGCTGCAGTCCGTGGTTTAGTAGGAGATGCACTTGCTCAAATGGTCCAAGATATTGCAACATCAATTGTAGGTTTAGCTATTGCTTTTGAAGCGAGTTGGCAGTTGGCACTTATCATTCTTGTTATGATTCCTCTAATCGGATTAAATGGATATATCCAAATCAAGTTCATGAAAGGGTTCAGTGCAAATGCAAAGGTGATGTATGAGGAAGCAAGTCAAGTTGCAAATGATGCTGTTGGAGGTATAAGAACTGTTGCGTCATTTTGTGCAGAAGAGAAGGTGATGGAAATATACAAAAGAAAGTGTGAAGGCCCATTGAAGGCAGGAATAAAGCAAGGTTTGATTAGTGGGATCGGGTTTGGTGTATCGTTTGCTTTGCTGTTTTGTGTATATGCAACCAGTTTTTATGCGGGAGCTCGTCTTGTTCAAGCTGGCCAAATCACTTTCTCAGACGTCTTCCGTGTTTTCTTTTCTCTGACGATGGCAGCTATAGGAATTTCCCAGTCAAGCTCATTGGCTCCAGATTCAAGCAAGGCCAAGAGTGCAGCTGCTTCCGTATTTGCTATTCTAGACAGGAAATCAAAAATAGATCCAAGTGATGAATCTGGTATGACACTGGACACAGTGAAGGGAGATATTGAGCTGAAGCACGTAAGCTTTAAGTATCCGACAAGGCCAGATGTTCAAATTTTAAGAGACCTTTGTTTGACCATTCGCAGTGGAAAGACGGTTGCTTTGGTTGGGGAGAGCGGATGTGGAAAGTCTACCGTAATATCATTGCTGCAAAGGTTTTATGATCCTGATTCAGGCCAGATTTCGTTGGACGGAATAGAAATTCAGAAGTTCCAGGTAAAATGGCTAAGGCAGCAAATGGGGCTTGTAAGCCAAGAGCCTGTGTTGTTCAACGACACAATTCGAGCCAATATTGCCTATGGAAAGGAAGGAAATGCAACAGAAGCAGAAGTTTTAGCAGCAGCCGAATTAGCAAACGCCCACAAGTTCATCAGTGGTCTGCAACAGAGTTATGATACGACAGTGGGAGAACGAGGAACTCAACTGTCAGGTGGGCAGAAGCAACGAGTAGCTATAGCGAGGGCCATATTGAAAAATCCAAAAATCCTACTATTAGATGAGGCGACAAGCGCATTGGATGCAGAATCAGAGAGAATAGTTCAAGATGCACTTGATCGGGTGATGGTAAATCGTACAACCGTGGTGGTAGCACATAGATTATCTACCATCAAAGGAGCAGATGTAATTGCTGTGGTGAAAAATGGAGTAATTGTGGAGAAAGGGAAACATGATACTCTTATCAATATCAAAGATGGCTTCTATTCCTCTTTGGTGGCCCTCCACACCAGTGCTTCCTAGTCTTATGCTCTCAATACTTGTATCTTATTATTTTTGTTATTTTGAGAGAAGCAAATCAATGTCATCATGTGTTGTGTTTGTTAAGTTCCCTGGCTGCTTCCAGTCTCTCATTTTGTTTTACTGGTTTTGCAGCCTGCGCGCACGATTACTTGTTGTAGCAATTAAATTCATCAACAGTTTACTCAGAACTATGTTATAGAAACTTCTATTTATACATGTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g009290.2.1SL2.50ch06:3249630..32577021,401-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g009290.2SL2.50ch06:3249411..32577028,292-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g009290.2.1.1SL2.50ch06:3257580..3257702123-n/a
exonexon:Solyc06g009290.2.1.10SL2.50ch06:3251550..3252439890-n/a
exonexon:Solyc06g009290.2.1.11SL2.50ch06:3250852..3251118267-n/a
exonexon:Solyc06g009290.2.1.12SL2.50ch06:3250496..3250759264-n/a
exonexon:Solyc06g009290.2.1.13SL2.50ch06:3250076..3250369294-n/a
exonexon:Solyc06g009290.2.1.14SL2.50ch06:3249411..3249981571-n/a
exonexon:Solyc06g009290.2.1.2SL2.50ch06:3256568..3256781214-2
exonexon:Solyc06g009290.2.1.3SL2.50ch06:3255124..3255431308-n/a
exonexon:Solyc06g009290.2.1.4SL2.50ch06:3254983..325503755-2
exonexon:Solyc06g009290.2.1.5SL2.50ch06:3254726..3254901176-n/a
exonexon:Solyc06g009290.2.1.6SL2.50ch06:3254365..3254586222-n/a
exonexon:Solyc06g009290.2.1.7SL2.50ch06:3253978..3254216239-1
exonexon:Solyc06g009290.2.1.8SL2.50ch06:3253322..3253847526-n/a
exonexon:Solyc06g009290.2.1.9SL2.50ch06:3252929..3253202274-2
intronintron:Solyc06g009290.2.1.10SL2.50ch06:3252440..3252928n/a-n/a
intronintron:Solyc06g009290.2.1.11SL2.50ch06:3251119..3251549n/a-n/a
intronintron:Solyc06g009290.2.1.12SL2.50ch06:3250760..3250851n/a-n/a
intronintron:Solyc06g009290.2.1.13SL2.50ch06:3250370..3250495n/a-n/a
intronintron:Solyc06g009290.2.1.14SL2.50ch06:3249982..3250075n/a-n/a
intronintron:Solyc06g009290.2.1.2SL2.50ch06:3256782..3257579n/a-n/a
intronintron:Solyc06g009290.2.1.3SL2.50ch06:3255432..3256567n/a-n/a
intronintron:Solyc06g009290.2.1.4SL2.50ch06:3255038..3255123n/a-n/a
intronintron:Solyc06g009290.2.1.5SL2.50ch06:3254902..3254982n/a-n/a
intronintron:Solyc06g009290.2.1.6SL2.50ch06:3254587..3254725n/a-n/a
intronintron:Solyc06g009290.2.1.7SL2.50ch06:3254217..3254364n/a-n/a
intronintron:Solyc06g009290.2.1.8SL2.50ch06:3253848..3253977n/a-n/a
intronintron:Solyc06g009290.2.1.9SL2.50ch06:3253203..3253321n/a-n/a
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http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17839274%2Fdetails feature 17839274
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