Solanum lycopersicum mRNA Solyc06g008800.1.1

mRNA details  
Name
Solyc06g008800.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc06g008800.1.1
Length
3,681
  
Description
Cc-nbs-lrr, resistance protein
Location(s)
SL2.50ch06:2746749..2750582
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006952
  • GO:0006915
Length
3834
Nb exon
3
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g008800.1.1 Cc-nbs-lrr, resistance protein

ATGGAAAAACGAAAAGATAATGAAGAAACAAACAACTCATTGGTGTTATTTTCTGCTCTTAGCAAGGACATTGCCGATGTTCTGGTTTACCTAGAGAATGAGGAAAATCAAAAAGCTCTTGACAAAGATCAAGTTGAAAAGCTAAAATTGAAAATGGCATTTATTTGTACATATGTTCAGCTTTCTTATTCCGATTTTGAGCAGTTTGAAGATATAATGACAAGAAAAAGACAAGAAGTTGAGAATCTGCTTCAACCTCTTTTTGATGATGATGTCCTTACTAGCCTCACCAGTAATATGGATGACTGTATCAGCTTGTATCATCGTTCTAATAAATCAGATGCCACCATGATGGATGAGCAATTGGACTTCCTCCTCTTGAATCTCTATCATTTATCCAAGCATCACGCTGAAAAGATATTTCCTGGAGTGACTCAATATGAATTTCTTCAGAATGTATGTGGCAACATAAGAGATTTTCATGGGTTGATAGTGAATGGTTGCATTAAGCATGAGATGGTTGAGAATGTCTTACCTCTGTTTCAACTGATGGCTGAAAGAGTAGGACACTTCCTTTGGGAGGATCAGACTGATGAAGACTCAAATGGGGATGACCAGAATGATAGAGACGCTCGACTCTTCCAGCTAACACATCTACTCTTGAAGATTGTTCCAACTGAACTGGAGGTTATGCACATATGTTATACAAATTTGAAAGCTTCAACTTCAGCAGAAGTTGGACGCTTCAATAAGAAGCTCCTGGAAACCTCACCGGATATTCTCAGAGAATCTATCATTCAACTTCAAGAGCATATGATAGCTGTTATTCCCCCTAGCACTTCAGGGGCTCGAAACATTCATGTCATGATGGAATTCTTATTACTTATTCTTTCTGATATGCCCAAGGACTTTATTCATCATGACAAACTTTTTGATCTCTTGGCTCATGTTGGAGTACTTACCAGGGAGGTATCAACTCTTGTACGTGACTTGGAAGAGAAATTAAGGAATAAAGAGGGTAATAACCAAACAAATTGTGCAACCCTAGACTTGCTGGAAAATATTGAACTCCTCAAGAAAGATCTCAAACATGTTTATCTGAAATCCCCAGATTCATCTCGATGTTGCTTCCCCATGAGTGATGGACCACTCTTCATGCATCTTCTACACATGCACTTAAATGATTTGCTAGATTCTAATGATTATTCAATTGCTTTGATAAAGGAAGAAATCAAGCTGGTGAAGCAAGACCTGGAATTCATAAGATCATTCTTTGTGGATGCTGCTGAGCAAGGATTGTATAAAGATATCTGGGCACGTGTTCTAGATGTGGCTTATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATAATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCATAAAGAAGATCAAACTTATCAAAGAAGAGATCTCTGCTTTAGATGAGAACATTCCCAAGGACAGAGGTCTAATCGTTGTGAACTCTCCCAAGAAACCAGTTGAGAGAAAGTCATTGACAACTGATAAAATAATTGTAGGTTTTGAGGAGGAGACAAACTTGATACTGAGAAAGCTCACCAGTGGACCGGCAGATCTAGATGTCATTTCGATCACTGGTATGCCGGGTTCAGGTAAAACTACTTTGGCATACAAAGTATACAATGATAAGTCAGTTTCTAGCCATTTCGACCTTCGTGCATGGTGCACAGTCGATCAAGGATATGACGACAAGAAGTTATTGGATACAATTTTCAGTCAAGTTAGTGACTCAGATTCAAAATTGAGTGAGAATATTGATGTTGCTGATAAATTACGGAAACAACTGTTTGGAAAGAGGTATTTTATTGTCTTAGATGACGTGTGGGATACTACTACATGGGATGAGTTAACAAGACCTTTTCCTGAAGCTAAGAAAGGAAGTAGGATTATTTTGACAACTCGAGAAAAGGAAGTGGCTTTGCATGGAAAGCTGAACACTGATCCTCTTGACCTTCGATTGCTAAGACCAGATGAAAGTTGGGAACTATTAGAGAAAAGGGCATTTGGGAACGAGAGTTGCCCTGATGAACTATTAGATGTCGGTAAAGAAATAGCCAAAAATTGTAAAGGGCTTCCTTTGGTGGCTGATCTGATTGCTGGAGTCATTGCTGGGAGGGAAAAGAAAAGGAGTGTGTGGCTTGAAGTTCAAAGTAGTTTGAGTTCTTTTATTTTGAACAGTGAAGTGGAAGTGATGAAAGTTATAGAATTAAGTTATGACCATTTACCACATCACCTCAAGCCATGCTTGCTGTATTTTGCAAGTTGGCCGAAGGACACTACAACGACAATCTATGAGTTGAATATTTTTTTGGGTGCTGAAGGATTTGTGGGAAAGGAGGAGATGAAGAGTATGGAAGAAGTGGTGAAAATTTATATGGATGATTTAATTTCCAGTAGCTTGGTAATTTGTTTCAATGAGATAGGTGATTCATTGAATTTCCAAATTCATGATCTTGTGCATGACTTTTGTGTGATAAAAGCAAGAAAGGAAAATTTGTTAGATCAGATAAGATCAAGTGCTCCATCAGATTTGTTGCCTCGTCAAATTACCTTTGATTATGATGATGATGAGGAGCACTTTGGGCTTAATTTTGTCATGTTCGATTCAAATAAGAAAAGGCATTCTGGTAAACACCTCTATTCTTTGAAAATAGATGGAGACGAGCTGGATGACAGTGTTTCTGATACATTTCACCTAAGACACTTGAGGCTTCTTAGAGTGTTGCACCTGGAACCCTCTTTTATCATGGTGAATGATTCTTTGCTGAATGAAATATGCATGTTGAATCATTTGAGGTACTTAAGAATTGGGACACAAGTTAAATATCTGCCTTTGTCTTTCTCAAACCTCTGGAATCTAGAAATCTTGTCGGTGAATAACAAAAAATCAACCTTGATACTATTACCGAGAATTTGGGATCTTGACACAAAGTTAGAGAACTTGAGAATATTAGGGGAACTGGTGATTTCCTATTCGAAAGATACAAAGAATATTTTCAAAAGGTTTCCCAATCTTCAGGTGCTTCAGTTTGAACTCAAGGAGTCATGGGATTATTCAACAGAGCAATATTGGTTCCCGAAATTGGATTGCCTAACTGAACTAGAAACACTCTCTGTAAGTTTTAAAAGTTCAAACACAAACCACAGTGGGTCCTCTGTAGCGACAAATCGGCCGTGGGATTTTCACTTCCCTTCAAATTTGAAACAACTGTGGTTGTATGACTTTCCTCTGACATCCGATTCACTATCAACAATAGCTAGACTTCCCAACCTTGAAGAGTTGTTACTTTACGATACAATCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTACCGACTCTTTCCAAGTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAACTAAAACTGCAGGAATGTGGTAAGCTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAATTTATCGAAATTGTAAATAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGAGATGAGAGGAGGGAGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g008800.1.1SL2.50ch06:2746748..27505821,227+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g008800.1SL2.50ch06:2746749..27505823,834+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g008800.1.1.1SL2.50ch06:2746749..274679042+n/a
exonexon:Solyc06g008800.1.1.2SL2.50ch06:2746866..27498022,937+n/a
exonexon:Solyc06g008800.1.1.3SL2.50ch06:2749881..2750582702+n/a
intronintron:Solyc06g008800.1.1.1SL2.50ch06:2746791..2746865n/a+n/a
intronintron:Solyc06g008800.1.1.2SL2.50ch06:2749803..2749880n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17838671%2Fdetails feature 17838671
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