Solanum lycopersicum mRNA Solyc06g008770.1.1

mRNA details  
Name
Solyc06g008770.1.1
Type
mRNA
Organism
Solanum lycopersicum
Synonyms / aliases
mRNA:Solyc06g008770.1.1
Length
3,687
  
Description
Cc-nbs-lrr, resistance protein
Location(s)
SL2.50ch06:2703086..2706897
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006952
  • GO:0005515
  • GO:0006915
Length
3812
Nb exon
3
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g008770.1.1 Cc-nbs-lrr, resistance protein

ATGGAAAAACGAAAAGATAATGAAGAAGCAAACAACTCATTGGTGTTATTTTCTGCTCTTAGCAAGGACATTGCCGATGTTCTGGTTTTCCTAGAGAATGAGGAAAATCAAAAAGCTCTTGACAAAGATCAAGTTGAAAAGCTAAAATTGAAAATGGCATTTATTTATACATATGTTCAGCTTTCTTATTCCGATTTTGAGCAGTTTGAAGATATAATGACGAGAAAAAGACAAGAGGTTGAGAATCTGCTTCAACCACTTTTGGATGATGATGTCCTTACTAGCCTCACCAGTAATATGGATGATTGTATCAGCTTGTATAAATCAGATGCCATCATGATGGATGAGCAATTGGACTTCCTCCTCTTGAATCTCTATCATCTATCCAAGCATCGTGCTAAAAAGATGTTTCCTAGATTGACACAATATGAAGTTCTTCAGAATGTATGTGGCAACATAAGAGATTTCCATGGGTTGATAGTGAATGGTTGCATTAAGCATGAGATGGTTGAGAATGTCTTACCTCTGTTTCAACTGATGGCTGAAAGAGTAGGACACTTCCTTTGGGAGGATCAGACTGATGAAGACTCAGATGAGGATCATCAGAATGATAGAGACTCTCGACTCTTCCAGCTAACACATCTACTCTTGAAGATTGTTCCAACTGAACTGGAGGTTATGCACATATGTTATACAAATTTGAAAGCTTCAACTTCAGCAGAAGTTGGACGCTTCATTAAGAAGCTCCTGGAAACCTCACCGGATATTCTCAGAGAATATATCATTCAACTACAAGGGCATATGATAACTGTTATTCACCCTAGCACTTCAGGGGCTCGAAACATTCATGTCATGATGGAATTCCTATTACTTATTCTTTCTGATATGCCCAAGGACTTTATTCATCATGACAAACTTTTTGATCTCTTGGCTCATGTCGGAGTACTTACCAGGGAGGTATCAACTCTTGTACGTGACTTGGAAGAGAAATTAAGGAATAAAGAGGGTAATAACCAAACAAATTGTGCAACCCTAGACTTGCTGGAAAATATTGAACTCCTCAAGAAAGATCTCAAACATGTTTATCTTAAAGCCCCGGATTCATCTCAATGTTGCTTCCCCATGAGTGATGGACCACTCTTCATGCATCTTCTACACATGCACTTAAATGATTTGCTAGATTCTAATGCTTATTCAATTTCTTTGATAAAGGAAGAAATCGAGTTGGTGAGACAAGACCTGGAATTCATAAGATCATTCTTTGTGGATGCTGAGCAAGGATTGTATAAAGATATCTGGGCACGTGTCCTAGATGTGGCTTATGAGGCAAAAGATGTCATAGATTCAATTATTGTTCGAGATGATGGTCTCTTACATCTTATTTTCTCACTTCCCATTACCATAAAGAAGATCAAACTTATCAAAGAAGAGATCTTTGCTTTAGATGAGAACATTCCCAAGGATAGAGGTCTAATCGTTGTGAACTCTCCCAAGAAACCAGTTGAGAGAAAGTCATTGACAACTGATAAAATAATTGTAGGTTTTGAGGAGGAGACAAACTTGATACTTAGAAAGCTGACCAGTGGACCGGCAGATCTAGATGTCATTTCGATCACTGGTATGCCGGGTTCAGGTAAAACTACTTTGGCATACAAAGTATACAATGATAAGTCAGTTTCTAGCCATTTCGACCTTCGTGCATGGTGCACGGTCGATCAAGGATATGACGACAAGAAGTTGTTGGATACAATTTTCAGTCAAGTTAGTGACTCAGATTCAAAATTGAAGGTAATTCTTATTGTCTTAGATGATGTGTGGGATACTACTACATGGGATGAGTTGACAAGACCTTTTCCTGAAGCTAAGAAAGGAAGTAGGATTATTTTGACAACTCGAGAAAAGGAAGTGGCTTTGCATGGAAAGCTGAAAACTGATCCTCTTGACCTTCGATTGCTAAGACCAGATGAAAGTTGGGAACTATTAGAGAAAAGGGCATTTGGGAATGAGATTTGCCCTGATGAACTATTAGATGTCGGTAAAGAAATAGCCGAAAATTGTAAAGGGCTTCCTTTGGTGGCTGATCTGATTGCTGGAGTCATTGCTGGGAGGGAAAAGAAAAGGAGTGTGTGGCTTAAAGTTCAAAGTAGTTTGAGTTCTTTTATTTTGAACAGTGAAGTGGAAGTGATGAAAGTTGTAGAATTAAGTTATGACCATTTACCACATCACCTCAAGCCATGTTTGCTGTATTTTGCAAGTATGCCGAAGGACACTATAATGAGTATCTATGAGTTGAATATTTTTTTGGGTGGTGAAGGATTTGTGGGGAAGACGGAGATGAAGAGTATGGAAGAAGTGGTGAAGATTTATATGGATGATTTGATTTCCAGTAGCTTGGTAATTTGTTTCAATGAGATAGGTGATGCACTGAATTTCAAAATTCATGATCTTGTGCATGACTTTTGTTTGATAAAAGCAAGAAAGGAAAATCTGTTTGATCGGATAAGATCAAGTGCTCCATCAGATTTGTTGCCTCGTCAAATTACCATTGATGATAAGGAGCACTTTGGGCTTAATTTTGTCATGTTCGATTCAAATAAGAAAAGGCATTCTGGTAAACACCTCTATTCTTTGGGGATAAATGGAGACCAACTGGATGACAGTGTTTCTGATGCATTTCACCTAAGACACTTGAGGCTTCTTAGAGTGTTGGACCTGGATAACTCTTTTATCATGGTGAATGATTCTTTGCTGAATGAAATATGCATGTTGAATCATTTGAGGTACTTAAGAATTGGGACAGAAGTTAAATATCTGCCTTTGTCTTTCTCAAACCTCTGGAATCTAGAAATCTTGTCGGTGGAACATAATGAATCAACCTTGATACTATTACCGAGAATTTGGGATCTCGTAAAGCTGCGAGTGCTGTTCGTGGATGATTGTTCTTTCTTTGATATGGATGCAGATGAATCAATATTGATAGCAGAGGACATAAAGTTAGAGAACTTGAGAATATTAGTGAAACTGTTGATTTTCTATTCGAAAGATACAAAGAATATTTTCAAAAGGTTTCCCAATCTTCAGATGCTTCAGTTTGTACTCGAGGAGTCGTGGGATTATTCAACAGAGCAATATTGGTTCCCGAAATTGGATTGCCTAACTGAACTAGAAACACTCTCTGTAAGTTTTAAAAGTTCAAACACAAACCACAGTGGGTCCTCTGTAGCGACAAATCGGCCGTGGGATTTTCACTTCCCTTCAAATTTGAAACAACTGTTGTTGTCTGACTTTCCTCTGACATCCGATTCACTATCAACAATAGCTAGACTGCCCAACCTTGAAGAGTTGTCCCTTTATGATGCAATCATCCAGGGAGAAGAATGGAACATGGGGGAGGAAGACACCTTTGAGAATCTCAAATTTTTGAACTTGCGTCTACCGACTCTTTCCAACTGGGAGGTTGGAGAGGAATCCTTCCCCAATCTTGAGAAATTAAAACTGCGGGGATGTGGTGAGCTTGAGGAGATTCCACCTAGTTTTGGAGATATTTATTCATTGAAAATTATCAAAATTGTAAATAGTCCTCAACTTGAAGATTCTGCTCTCAAGATTAAGGAATACGCTGAAGAGATGAGAGGAGGGGGCGAGCTTCAGATCCTTGGCCAGAAGAATATCCCCTTATTTAAGTAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g008770.1.1SL2.50ch06:2703085..27068971,229+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g008770.1SL2.50ch06:2703086..27068973,812+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g008770.1.1.1SL2.50ch06:2703086..270312742+n/a
exonexon:Solyc06g008770.1.1.2SL2.50ch06:2703203..27049461,744+n/a
exonexon:Solyc06g008770.1.1.3SL2.50ch06:2704997..27068971,901+2
intronintron:Solyc06g008770.1.1.1SL2.50ch06:2703128..2703202n/a+n/a
intronintron:Solyc06g008770.1.1.2SL2.50ch06:2704947..2704996n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17838646%2Fdetails feature 17838646
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)