Solanum lycopersicum mRNA Solyc06g008580.2.1
 mRNA details
|
| Name | Type |
Length
867
|
Organism |
|
Description
Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein
|
|
Location(s)
SL2.50ch06:2489747..2491131
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0005634
- GO:0046983
- Length
- 1385
- Sifter term
- GO:0003700
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc06g008580.2.1 Auxin responsive protein (AHRD V1 ***- D9IQE6_CATRO); contains Interpro domain(s) IPR003311 AUX/IAA protein
TCATTCATCATTCACATTTTGATAGCTCAACACATTCTTCACCGGAAAAAAGTCGACGTCGCCGGACATACGCCGGAGAAAAAAAAAGGGTCATCAACAACAAAGTATTCATCAAATTCGATATATTATATACAGTCATATAATATCAAAGAATATTGAAAATGGCAACAATCTACGAGAATAATGATCTTGCAACTGAGCTGAGATTAGGGTTACCCGGTACAACAGATAAATCGAAGACACGTGTATCTTCGACTAGTACTACTAATAAAAGATCTTTATCAGAGATGGACAGCTCCTCAGATATTATAAATCAAAATGATCAACAAGACTCCTCCCCTCCACCAAAAGTACAAATTGTTGGTTGGCCACCAGTAAGATCTTGCAGGAAGAATGTTGGTGTACAAGCCAAGAATTCAATTGATATTTCCATAGGAATGTATGTGAAAGTTAGCATGGATGGAGCACCTTACTTGAGGAAAATTGACCTTAGGGTTTACAAAAATTATCAAGAATTACTCAAAGCTTTGGAGTACATGTTCAAGCATCCCATTGGTGTATTTTTGGAAAAAGAAGGCTACACTACTAGTGGATCTGATTATGTATTAACATATGAAGACAAAGATGGTGATTGGATGCTTGTTGGAGATGTACCATTGGATATGTTTATTAGTTCTTGTAAAAGGCTTAGAATCATGAAAGAGTCTGATGCTAAAGGTTTGGGATGCCTATAGGGATCTCATAGATTTAAGGCAGATTTTGTGGGTTCGAACTTTGTTTTTGATTCGATTTATGTATATATATACACACAAAAAATAAATAAATTAATATATAGTACTCATGAATAATTATGATGAGAACATCATA
TCATTCATCATTCACATTTTGATAGCTCAACACATTCTTCACCGGAAAAAAGTCGACGTCGCCGGACATACGCCGGAGAAAAAAAAAGGGTCATCAACAACAAAGTATTCATCAAATTCGATATATTATATACAGTCATATAATATCAAAGAATATTGAAAATGGCAACAATCTACGAGAATAATGATCTTGCAACTGAGCTGAGATTAGGGTTACCCGGTACAACAGATAAATCGAAGACACGTGTATCTTCGACTAGTACTACTAATAAAAGATCTTTATCAGAGATGGACAGCTCCTCAGATATTATAAATCAAAATGATCAACAAGACTCCTCCCCTCCACCAAAAGTACAAATTGTTGGTTGGCCACCAGTAAGATCTTGCAGGAAGAATGTTGGTGTACAAGCCAAGAATTCAATTGATATTTCCATAGGAATGTATGTGAAAGTTAGCATGGATGGAGCACCTTACTTGAGGAAAATTGACCTTAGGGTTTACAAAAATTATCAAGAATTACTCAAAGCTTTGGAGTACATGTTCAAGCATCCCATTGGTGTATTTTTGGAAAAAGAAGGCTACACTACTAGTGGATCTGATTATGTATTAACATATGAAGACAAAGATGGTGATTGGATGCTTGTTGGAGATGTACCATTGGATATGTTTATTAGTTCTTGTAAAAGGCTTAGAATCATGAAAGAGTCTGATGCTAAAGGTTTGGGATGCCTATAGGGATCTCATAGATTTAAGGCAGATTTTGTGGGTTCGAACTTTGTTTTTGATTCGATTTATGTATATATATACACACAAAAAATAAATAAATTAATATATAGTACTCATGAATAATTATGATGAGAACATCATA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc06g008580.2.1 | SL2.50ch06:2489879..2490970 | 191 | - | n/a |
Add items to a list:
| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc06g008580.2 | SL2.50ch06:2489747..2491131 | 1,385 | - | n/a |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc06g008580.2.1.1 | SL2.50ch06:2490783..2491131 | 349 | - | 1 |
| exon | exon:Solyc06g008580.2.1.2 | SL2.50ch06:2490341..2490546 | 206 | - | 2 |
| exon | exon:Solyc06g008580.2.1.3 | SL2.50ch06:2489747..2490058 | 312 | - | n/a |
| intron | intron:Solyc06g008580.2.1.2 | SL2.50ch06:2490547..2490782 | n/a | - | n/a |
| intron | intron:Solyc06g008580.2.1.3 | SL2.50ch06:2490059..2490340 | n/a | - | n/a |
Add items to a list:
| Related views |
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Working
