Solanum lycopersicum mRNA Solyc06g007320.2.1

mRNA details  
Name
Solyc06g007320.2.1
Type
mRNA
Length
3,709
Organism
Solanum lycopersicum
Description
Ubiquitin-activating enzyme E1 (AHRD V1 ***- B9SKU8_RICCO); contains Interpro domain(s) IPR018075 Ubiquitin-activating enzyme, E1
Location(s)
SL2.50ch06:1338607..1348621
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006464
  • GO:0008152
  • GO:0003824
Length
10015
Nb exon
7
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g007320.2.1 Ubiquitin-activating enzyme E1 (AHRD V1 ***- B9SKU8_RICCO); contains Interpro domain(s) IPR018075 Ubiquitin-activating enzyme, E1

TCTACACATGAAAATTCTTCTCCATTACTTCTCCATCTTTCCGATCAATCATTTTCACTCATATCTTCTCGTTCAATCGCAGTTTGTTGCACTATATGCTTCCTAGAAAGAGACCGGCAGAAGGCGTGGTAGTTGAAGGTAACAGTAGCAGTTGTGATCCAGAAAGTTCTCTTAAAAAGCATAAAATTAGTTGCGTGATTTCTTCCGGTACCGAAGAGAATACCAGTGGTTGCAGTAGTAACAAGGTCGTAAGTAATAATACAAACGGTAACACTAGCAGCGGTAGTGTTGGTGAACGGTCAGTGACTGAAATGGCTTTTGATGATGGAAATCCACATGATATTGATGAGGATCTCCACAGCAGACAGCTCGCCGTGTATGGCCGTGAAACTATGCGGCGGCTCTTTGCTTCTAACGTTCTTGTCTCAGGAATCCAAGGGCTTGGTGCTGAAATAGCAAAGAATCTTATACTTGCTGGTGTAAAGTCTGTGACTCTGCATGATGAAGGAGAAGTGCAGTTGTGGGATTTGTCTAGCAATTTTATTTTCTCAGAGAGTGATGTTGGCATGAACAGAGCGCTTGCTTCTGTTCAAAAGCTACAAGAACTCAACAATGCTGTGGTTGTCTCAAGTTTTACGACAAAATTGACCAAAGAAAAGCTTTCTGATTTCCAGGCTGTGGTATTTACTAACACCAGCTTAGAGGACGCACTAGAATTCAATGACTACTGCCACAACCATCAACCCCCTATTGCATTTATCAGAACTGAAGTGAGGGGTCTATTTGGTTATGTCTTCTGTGATTTTGGCCCTGAGTTTACAGTTTTTGATGTAGATGGTGAAGAACCTCATACGGGTATTATTGCATCAATTAGTAATGATAACCCTGCCCTAATTTCGTGTGTGGATGATGAAAGGCTTGAGTTTCAGGATGGGGACCTAGTTGTCTTTTCAGAAGTACAGGGCATGACAGAACTTAATGATGGCAAGCCAAGAAAAATTAGCAGTGCAAGACCTTATTCCTTTACCCTCGATGAAGACACAACGAACTTTGGTCCCTATGTAAGAGGTGGTATTGTTACTCAGGTGAAGCCACCCAAAATTTTGAACTTCAAGACACTGAGGGAATCTATCATGGATCCTGGCGATTTCCTTCTTAGTGATTTTTCAAAGTTTGACCGCCCACCTCTGCTACATTTGGCATTCCAAGCATTAGACAAGTTCAGATCAGATTTGGCACGGTTTCCTCTTGCTGGTTCAGAAGATGATGCTCAGACGCTGATATCTATTGCGACCAATTTAAATGAAAGTAATGGGAATGTCAAACTGGACGATATAAACCCAAAACTTCTACAGAAGTTCTCTTATGGTGCACGTGCCGAACTTAATCCCATGGCTGCTATGTTTGGTGGTATTGTCGGGCAGGAGGTTGTGAAGGCTTGCTCTGGGAAGTTTCATCCACTTTATCAGTTCTTTTACTTTGACTCCCTGGAATCACTTCCAACTGAACCACTTGATCCTAGTGATTTGAAGCCATTAAATACTCGGTATGATGCCCAAATCTCAGTCTTTGGGAAGAAATTCCAGAAGAAACTAGAAGATGCCAAGGTGTTTATGGTGGGATCTGGTGCCCTGGGTTGTGAGTTCCTGAAGAACTTGGCTTTAATGGGAGTTGCATGCACCGAGCAAGGGAAATTAACAGTGACTGATGATGATGTCATTGAGAAGAGTAATCTCAGTAGACAATTTCTCTTCCGTGATTGGAACATCGGCCAGGCAAAATCTACTGTTGCTGCTGCTGCTGCAACATCAATAAATCCCCAGCTCCGGGTTGAAGCTTTGCAGAACCGTGTGGGTCCTGAAACTGAAAATGTGTTTGATGACACTTTCTGGGAGAATCTTAGTGTGGTTATTAACGCACTTGACAATGTCAATGCAAGACTTTATGTCGATCAGAGATGCTTGTACTTTCAGAAGCCACTGCTTGAATCAGGGACCCTTGGAGCCAAATGTAACACTCAGATGGTGATTCCCCATCTGACTGAGAATTATGGTGCATCAAGAGATCCTCCAGAGAAACAAGCACCAATGTGCACTTTGCATTCCTTCCCACATAATATAGATCATTGTTTGACATGGGCACGATCCGAATTTGAGGGTTTGCTTGAGAAAACACCAGCCGAAGTGAATGCTTATCTTTCTAATCCAAACGAATATACATCTGCACAAACAAATGCTGGGGATGCTCAAGCCAGAGACAATTTGGAGCGTATTCTCGAATGTCTAGATCGAGAAAGCTGTGAAACTTTTGAAGATTGCATTGCATGGGCACGTCTCAAGTTTGAAGAATATTTTGCAAACCGAGTAAAACAATTGATTTTCACATTCCCGGAGGATGCAGTGACCAGCTCTGGAGCCCCTTTTTGGTCAGCCCCCAAGCGCTTCCCTCGCCCCTTGCAGTTCTCTTCTACCGACCCAAGTCATCTCCATTTTATCATGGCTGCATCCATATTGCGTGCTGAAACATTTGGTATACCTATTCCTGATTGGGTTAAGCACCCACAGAAATTGAGTGAAGCAGTGCACAAGGTTATGGTCCCATGTTTTCAACCTAGAAAAGATGCGAAAATTGTGACTGATGAGAAGGCAACCAGTCTCTCTTCATCAGCTTCTATAGATGATGCTGCGGTTATCGATGAACTTATATCAAAGCTGGAGTGCGGTAGGAAGAATTTGCCACCAGGCTTCAGGATGAAACCTATTCAATTTGAGAAGGACGATGACACTAATTTCCATATGGATCTTATAGCTGCACTTGCCAACATGAGAGCAAGGAACTACTGTATCCCCGAAGTTGACAAACTGAAAGCTAAGTTTATCGCGGGAAGGATCATCCCAGCAATCGCAACTACTACTGCGATGGCTACAGGTTTGGTTTGCCTTGAGCTGTATAAGGTTCTAGATGGCAGTCACAAACTGGAGGACTACCGGAACACGTTTGCCAACCTTGCTCTACCTCTTTTTTCCATAGCTGAGCCAGTACCACCCAAGATCATCAAACATAATGACCTGAGCTGGACTGTTTGGGATAGGTGGGTCATCAAGGACAATCCTACACTGAGAGAACTAATCCAATGGCTTGCAGACAAAGGACTGAATGCATACAGCATTTCATGTGGAAGCTGCCTGCTCTTTAACAGCATGTTCCCCCGGCACAAAGAACGGATGGACCAGAAAGTAGTAGATTTGGCGAGGGACGTGGCAAAGATGGAGATACCACCATACCGCCGTCACTTGGATGTTGTTGTTGCCTGTGATGACGACAACGACGAAGACGTTGATATTCCTCTGGTGTCTGTATACTTCCGTTGAATTTTCTTGGTAATCAATTCCAGTATTGGTTTCGAAGTTCAGGATCATACATCATCTTGTATGCACTATCCTCCAGTCTCTATGTTCTAATAATATAAGATACACGGCAAGATTCTTTTCCGTAGCAACTTTGATTCTTACTATGCCCATTGATGGTGCCTCGCTATATTTTGAACCTGCTTTCGTTTTGTATGTATATTCTGCATTTTGTCAATTCAGTTACTTGTCAAGATTACGGGGTCATCACGAGAATGGCCTGAGAGGTGAGTGTTCTAAAATTTTTGTCCTTGTTTACCTCATGGATGAAAATATAAATCGTACCAACTTTTGATCTTGAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g007320.2.1SL2.50ch06:1338944..13470811,020-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g007320.2SL2.50ch06:1338607..134862110,015-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g007320.2.1.1SL2.50ch06:1348543..134862179-n/a
exonexon:Solyc06g007320.2.1.2SL2.50ch06:1346937..1347313377-2
exonexon:Solyc06g007320.2.1.3SL2.50ch06:1346502..1346719218-n/a
exonexon:Solyc06g007320.2.1.4SL2.50ch06:1341279..1342073795-n/a
exonexon:Solyc06g007320.2.1.5SL2.50ch06:1340174..1341042869-1
exonexon:Solyc06g007320.2.1.6SL2.50ch06:1339644..1340079436-n/a
exonexon:Solyc06g007320.2.1.7SL2.50ch06:1338607..1339541935-n/a
intronintron:Solyc06g007320.2.1.2SL2.50ch06:1347314..1348542n/a-n/a
intronintron:Solyc06g007320.2.1.3SL2.50ch06:1346720..1346936n/a-n/a
intronintron:Solyc06g007320.2.1.4SL2.50ch06:1342074..1346501n/a-n/a
intronintron:Solyc06g007320.2.1.5SL2.50ch06:1341043..1341278n/a-n/a
intronintron:Solyc06g007320.2.1.6SL2.50ch06:1340080..1340173n/a-n/a
intronintron:Solyc06g007320.2.1.7SL2.50ch06:1339542..1339643n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17837118%2Fdetails feature 17837118
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