Solanum lycopersicum mRNA Solyc06g007180.2.1

mRNA details  
Name
Solyc06g007180.2.1
Type
mRNA
Length
2,318
Organism
Solanum lycopersicum
Description
Asparagine synthase (Glutamine-hydrolyzing) (AHRD V1 **** A9EDI4_9FLAO); contains Interpro domain(s) IPR006426 Asparagine synthase, glutamine-hydrolyzing
Location(s)
SL2.50ch06:1237837..1242525
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0008152
  • GO:0006529
Length
4689
Nb exon
13
Sifter term
  • GO:0004066
  • GO:0042803
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc06g007180.2.1 Asparagine synthase (Glutamine-hydrolyzing) (AHRD V1 **** A9EDI4_9FLAO); contains Interpro domain(s) IPR006426 Asparagine synthase, glutamine-hydrolyzing

CACACAATTCCATTTGTACGCAAATTCACTAACTACGTGTTCTTTTTCTCCAAAAATCTTGCATATTTTTCTCTGTTCTGTTTATTATTATCTAGTTTCAATTTGAAATATCTTTATTTACAAAAAAAGAAACATTTAAAAAATTCGTAAATTTTTTTTTTTACTAAACATTATTTTTTAAAAAAAATCGAAGTATTTGATCAATAATCATGTGTGGAATTTTGGCTTTGTTGGGTTGTTCGGATGATTCTCAGGCTAAAAGGGTTCGAGTTCTTGAGCTTTCTCGCAGGTTGAAGCATCGCGGACCGGATTGGAGTGGAATATTTCAATATGGTGATTTTTATTTAGCACATCAACGTCTAGCAATTATCGACCCTGCTTCTGGTGATCAACCTCTGTTTAATGAAGACAAAAAGATTGTTGTTACTGTTAATGGAGAGATCTACAATCATGAAAAACTTCGAAAACTTATGCCTAATCACAAGTTTAGGACTGGGAGTGATTGTGATGTTATTGCTCATCTTTATGAAGAGTATGGAGAAAATTTTGTTGACATGTTGGATGGAGTGTTCTCTTTCGTACTATTGGATACTCGCGATAATAGCTTTCTTGCTGCTCGTGATGCCATTGGAATTACACCCCTCTATATTGGTTGGGGACTTGATGGATCTGTGTGGATATCATCTGAGCTAAAGGGCTTGAATGATGATTGTGAACATTTTGAAGTTTTCCCTCCGGGGCACTTGTACTCGAGCAAGAACGGAGGGCTTAGGAGATGGTACAATCCCGCTTGGTTCTCCGAGGCTATTCCTTCCACTCCTTACGACACTTTGGTTCTGAGGCGCGCCTTTGAAAATGCTGTTATCAAACGGTTGATGACTGATGTCCCCTTTGGTGTTCTGCTCTCGGGGGGACTTGATTCGTCTTTGGTTGCTTCTGTAACTGCTCGATACTTGGCTGGAACGAAAGCTGCTAAGCAATGGGGAGCACAACTTCATTCATTCTGTGTTGGTCTCGAGGGTTCACCAGATCTTAAGGCTGCGAAAGAAGTTGCTGACTTTTTAGGAACCGTTCACCACGAGTTTCACTTCACTGTTCAGGACGGGATTGATGCTATTGAAGATGTTATATATCATATCGAAACGTATGATGTAACAACAATAAGAGCAAGCACTCCTATGTTCCTTATGTCGCGTAAGATCAAATCACTAGGAGTGAAGATGGTCATATCAGGAGAAGGCGCTGACGAAATTTTTGGTGGCTACTTATACTTCCACAAGGCTCCCAACAAGGAGGAGTTCCACAGGGAAACATGTCGCAAGATAAAAGCTCTTCACCAGTATGACTGTTTAAGAGCAAACAAGGCAACGTCTGCGTGGGGCTTAGAAGCTAGAGTACCATTTCTGGATAAAGAGTTCATCAATGTTGCCATGAGTATCGATCCCGAGTGGAAGATGATTAAACATGATCAAGGAAGGATCGAGAAGTGGGTTCTTAGGAAGGCGTTTGATGATGAGGAGCAACCGTATCTTCCAAAGCATATTCTGTACAGGCAGAAAGAACAATTCAGCGATGGCGTAGGCTATAGTTGGATCGATGGGCTCAAAGCACATGCTGAACAACATGTGACTGATAGGATGATGCTTAATGCTGCTCATATCTTCCCACACAACACTCCGACTACGAAAGAAGGATACTATTACAGAATGATTTTCGACAGGTTCTTCCCACAGAACTCAGCGAGCCTGACAGTTCCTGGAGGACCGAGTATAGCTTGTAGCACGGCTAAAGCAATCGAGTGGGATGCTTCTTGGTCGAACAACCTTGATCCTTCTGGTAGGGCTGCTATCGGTGTACATAACTCTGCTTATGACAACCATCTATCCGGTGTTGCTAATGGGAATTTGGACACCCCGATCATCAGTAACATGCCAAGGATGGTAGGCGTTGGCGTGGCTGCAGAGCTCACAATAAGAAGCTAACTAGCACTAGTCTCTTGCTGTCCATGACTCGATGTTTGAAATATTAGTATTATTGTTGTTGTTGTTGTTGTTATTATAGGAAGAAGCAGCATGTCTTTTAGATATCCTGCTGCATAGAAAGAGCATTGGGTCAATGTTTTAACTAGAATAAAAAAAACCAAAACCATATAGAGGTTTTGAAGATCTTGAGCACCACTATTGTTCCTAGTTGGTGCTTGTGTCTAATTGTACTGTTTTCCCTTTTACCACAACTCTATTGGCACTATATAGAGTGTCCTTCTGGACTTTGTAATATTGGTATATGTAAAGTTCTGGTTATAGTCATCCTTCTTGTTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc06g007180.2.1SL2.50ch06:1238172..1242316591-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc06g007180.2SL2.50ch06:1237837..12425254,689-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc06g007180.2.1.1SL2.50ch06:1242237..1242525289-1
exonexon:Solyc06g007180.2.1.10SL2.50ch06:1238959..123903981-n/a
exonexon:Solyc06g007180.2.1.11SL2.50ch06:1238788..123887487-n/a
exonexon:Solyc06g007180.2.1.12SL2.50ch06:1238536..1238643108-n/a
exonexon:Solyc06g007180.2.1.13SL2.50ch06:1237837..1238421585-n/a
exonexon:Solyc06g007180.2.1.2SL2.50ch06:1241096..1241234139-n/a
exonexon:Solyc06g007180.2.1.3SL2.50ch06:1240799..124089496-n/a
exonexon:Solyc06g007180.2.1.4SL2.50ch06:1240521..1240662142-2
exonexon:Solyc06g007180.2.1.5SL2.50ch06:1240214..1240404191-n/a
exonexon:Solyc06g007180.2.1.6SL2.50ch06:1239939..1240100162-n/a
exonexon:Solyc06g007180.2.1.7SL2.50ch06:1239748..123982881-n/a
exonexon:Solyc06g007180.2.1.8SL2.50ch06:1239444..1239665222-n/a
exonexon:Solyc06g007180.2.1.9SL2.50ch06:1239210..1239344135-n/a
intronintron:Solyc06g007180.2.1.10SL2.50ch06:1239040..1239209n/a-n/a
intronintron:Solyc06g007180.2.1.11SL2.50ch06:1238875..1238958n/a-n/a
intronintron:Solyc06g007180.2.1.12SL2.50ch06:1238644..1238787n/a-n/a
intronintron:Solyc06g007180.2.1.13SL2.50ch06:1238422..1238535n/a-n/a
intronintron:Solyc06g007180.2.1.2SL2.50ch06:1241235..1242236n/a-n/a
intronintron:Solyc06g007180.2.1.3SL2.50ch06:1240895..1241095n/a-n/a
intronintron:Solyc06g007180.2.1.4SL2.50ch06:1240663..1240798n/a-n/a
intronintron:Solyc06g007180.2.1.5SL2.50ch06:1240405..1240520n/a-n/a
intronintron:Solyc06g007180.2.1.6SL2.50ch06:1240101..1240213n/a-n/a
intronintron:Solyc06g007180.2.1.7SL2.50ch06:1239829..1239938n/a-n/a
intronintron:Solyc06g007180.2.1.8SL2.50ch06:1239666..1239747n/a-n/a
intronintron:Solyc06g007180.2.1.9SL2.50ch06:1239345..1239443n/a-n/a
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