Solanum lycopersicum mRNA Solyc05g056580.2.1

mRNA details  
Name
Solyc05g056580.2.1
Type
mRNA
Length
2,927
Organism
Solanum lycopersicum
Description
Dehydration-responsive family protein (AHRD V1 **-- D7LF23_ARALY); contains Interpro domain(s) IPR004159 Protein of unknown function DUF248, methyltransferase putative
Location(s)
SL2.50ch05:65826429..65830771
GFF source
ITAG_eugene
From BOGAS
1
Length
4343
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g056580.2.1 Dehydration-responsive family protein (AHRD V1 **-- D7LF23_ARALY); contains Interpro domain(s) IPR004159 Protein of unknown function DUF248, methyltransferase putative

CACAAGAGTGATTCAAAGATTTTAATCTTATTATTCTTATTTTGTATCTCAGGTGGATAGAGGAAATTTGTGAAGGACTGATAGAAGTTACCGGAAAAAATGGCATTAGGAAAGTACTCTAGAGTAGATGGAAGGAAGTCATCAAACTATTGCTCCACTGTAACTATAGTGGTATTTGTAGCTCTATGTTTAGTTGGGGTATGGATGATGACGTCATCATCTGTCGTTCCAGACCAAAATCTAGATTTGTCCTCACAGGGGAAAAAGACTGACCTGTCAACACAGGTAACCGAAGGTAAAGAGAGTTACAATGGTGGCAATGAGAGTAACAATAAAGCTGGTGATGAGAGTAATCCAACGGATGAGGGAAAATCAAAACAATTTGAGGATACCCTCGGTGATTTACCTGAGGATGCAACAAAAGGGGATGCCTTAGTTAGTCAAGAAGAAAATGTTTCTAATCCACAACAGACAGAATCAACTTCAGAAGTGAAACAGGAAGAGAAATCGACAGAACAGAAAGAGGATGCTGGAGAATCTGAGTCAGAAACTCAATCCGAGAAGGCAACAGATGGTTCAGATGACAAAAAGGAAGATGGTCCAAACAAAGTAGATGACAAGGATTCTGAGGCTGGGGAGAAAACTGAAAATAAATCTGTCGGAGAAGAGATCAAAGAAGGTTCTGATGAGAAAAAATCAATAGAAAACTCAGTTGAACTGAATGATAAAAAGGATCAGGAGGTAGGCCAAAGTTCTGATGAGAAGTCTGATGGTGAGAAGAAGGACCTGTCTTCAAGTGCCGTATTGAGTTCGGGGACTCAGTCGGACCTTTTGAATGAAACTACAACTCAAAATGGGGCATTTTTAACTCAGGCGTCGGAATCAAAGAATGAAAAGGAAATGCAGAAGTCTTCGGAGTCAGATAAAGAAAGTAGTTACATTTGGAAACTCTGCAATTCCACTGCTGGGCCAGATTATATCCCTTGCCTTGATAATTTGGAAGCAATTAGGAACCTCAGAAGTACAAAACATTATGAACACCGAGAGAGACACTGCCCAGATAATCCTCCGACTTGTCTTGTTCCACTTCCTGAAGGATATCAACATTCAGTTGAGTGGCCTACGAGTAGGGAAAAGATATGGTACCACAATGTTCCCCATACAAAGCTTGCAGAAATTAAAGGACATCAAAATTGGGTAAAAGTTAGTGGTGAATACCTTACCTTCCCTGGTGGGGGAACCCAGTTCAAGCATGGCGCTCTGCACTATATTGATTTCATACAGCAGTCTTTTCCAGAAATTGCCTGGGGAAAGCAAACTCGGGTTATATTAGATGTTGGATGTGGGGTTGCAAGCTTTGGGGGTTATCTTTTCGAAAGAGATGTTTTGGCCATGTCTTTAGCTCCTAAAGATGAACATGAAGCTCAGGTTCAGTTTGCTCTTGAGAGGGGTATTCCTGCTATATCTGCTGTTATGGGTACAAAGAGGCTTCCCTTTCCTAGTCGAGTCTTTGACGTTGTTCATTGTGCACGTTGTAGAGTGCCCTGGCATATTGAAGGGGGGAAACTTCTCCTGGAGCTGAATCGTGTACTTCGACCTGGTGGACTTTTTGTGTGGTCTGCTACTCCTGTCTACCAGAAGCTCCCCGAAGATGTTGAGATCTGGGAAGCCATGCAGAAGTTGACAAAGGCAATGTGCTGGGATCTTGTTTCAAAAACCAAAGATAGAGTCAATGGAGTAGGGGTTGCTGTATATCGCAAGCCTACTTCCAATGAGTGCTATGAACAAAGATCAAAAGACGCTCCCCCGATTTGTCAAGGATCTGATGATCCAAATGCAGCCTGGAATGTGCCTTTACAAGCTTGCATGCATAAAGCTCCTGTTGCCACATCGGAACGTGGATCTCAATGGCCAGAACCATGGCCAGCCAGGTTATCGAAATCACCTTACTGGTTATTGAGTTCCCAGGTTGGAGTATATGGGAAACCAGCCCCGGAAGATTTTACTGCAGATTATGAACACTGGAAACATGTGGTGACAAATTCATATCTTAATGGAATGGGGATAAATTGGTCTACTGTGCGGAATGTTATGGACATGCGTGCTATCTATGGAGGATTTGCAGCTGCTTTAAGAGACTTGAATGTGTGGGTTATGAACGTTGTCTCAGTAGATGCTCCAGATACACTACCAATTATTTATGAAAGAGGTCTTTTTGGAATTTATCATGACTGGTGTGAATCCTTCAGCACTTACCCCAGATCGTACGATCTTGTCCATGCAGACCATCTCTTCTCCAAGATTAAAACAAAGTGTGGTTTACCGGCAATAGTTGCTGAAGTTGACCGCATTTTGAGACCAGGAGGGAAGCTCATTGTGCGTGACAAAGAGGAGACTATAACTGAGTTAGAAAGTATGCTCAAGTCTATGCAATATGAAATCAATATGACCTATTCCAAGGACAAGGAAGGATTGTTGTATTGCCAGAAAACAATGTGGCGACCAAAGGACGTTGAGACACTAACTTATGCCATTGCTTAGCTGCCTTGCATGTGAAGGATGCTGGTTGTGTTCCGTTCAAGAGGCTTTCATGCCACGGTGACTAGATAATTTTCTGATTAAATTCTTGTAACTTTATTCTTGTCAGGCTATCGCGTACCATTTCCTTAGCAAATTAGTAGTATCATCATTAAATATTTGTGGATAGTAAATGCCTTGAGGTTCTGTATTTTGTAATATGGAGGAGGTGAACGATGGTAAATCTCAAAAGCACCACAATCATATTCGTTTTCACATTGAATTGGGCAACAGGCCAATACTCCCTATACTTTGTATTGTTGAGGAATATCTGCTTTATTAGTCTTCAAAATTGCACTTTCTAGTGTCTCTACTCTTTCAAATAATTACAAAACATAGAAATATTGTGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g056580.2.1SL2.50ch05:65826814..65830672814-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g056580.2SL2.50ch05:65826429..658307714,343-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g056580.2.1.1SL2.50ch05:65829635..658307711,137-n/a
exonexon:Solyc05g056580.2.1.2SL2.50ch05:65829401..65829550150-n/a
exonexon:Solyc05g056580.2.1.3SL2.50ch05:65828991..65829261271-2
exonexon:Solyc05g056580.2.1.4SL2.50ch05:65828627..65828737111-2
exonexon:Solyc05g056580.2.1.5SL2.50ch05:65828363..65828537175-1
exonexon:Solyc05g056580.2.1.6SL2.50ch05:65827754..65828026273-1
exonexon:Solyc05g056580.2.1.7SL2.50ch05:65827145..65827339195-1
exonexon:Solyc05g056580.2.1.8SL2.50ch05:65826429..65827043615-n/a
intronintron:Solyc05g056580.2.1.2SL2.50ch05:65829551..65829634n/a-n/a
intronintron:Solyc05g056580.2.1.3SL2.50ch05:65829262..65829400n/a-n/a
intronintron:Solyc05g056580.2.1.4SL2.50ch05:65828738..65828990n/a-n/a
intronintron:Solyc05g056580.2.1.5SL2.50ch05:65828538..65828626n/a-n/a
intronintron:Solyc05g056580.2.1.6SL2.50ch05:65828027..65828362n/a-n/a
intronintron:Solyc05g056580.2.1.7SL2.50ch05:65827340..65827753n/a-n/a
intronintron:Solyc05g056580.2.1.8SL2.50ch05:65827044..65827144n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17835699%2Fdetails feature 17835699
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