Solanum lycopersicum mRNA Solyc05g056490.2.1

mRNA details  
Name
Solyc05g056490.2.1
Type
mRNA
Length
1,608
Organism
Solanum lycopersicum
Description
3&apos(2&apos) 5&apos-bisphosphate nucleotidase (AHRD V1 **** Q0WTT5_ARATH); contains Interpro domain(s) IPR006239 3(2),5 -bisphosphate nucleotidase HAL2
Location(s)
SL2.50ch05:65760759..65766726
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0006790
  • GO:0004437
Length
5968
Nb exon
8
Sifter term
GO:0008441
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g056490.2.1 3&apos(2&apos) 5&apos-bisphosphate nucleotidase (AHRD V1 **** Q0WTT5_ARATH); contains Interpro domain(s) IPR006239 3(2),5 -bisphosphate nucleotidase HAL2

TGATTGTTGAATCTATTTCTTCACTTTTATTTTAAAGATCGAATTCAATAATTTTGAGGTTAAGAATCTTTGTGCTAATTTTTTTTTTCATTTTATAAAAGAAAAAATAGGTGGAGTTTTGTATATTTTATTTCAATAAAATTTGCACATTGGCCAATTTTGCCACCAACTTCAAGAATGGAAATGGCTACTTTCACGGGATTATCATCTAGGAGTATAAATTCGTTGACACAAAAAACTCTGCCATTGTTGACAAAAAATACAAAACCCCACTTCCCCTTTTCACTTTTGCTCACTCTAAGAGCATCTAAATCAACCTTAAGAGCTGTTACAATGTCGTATGATAAAGAACTTGATGCTGCCAAGAATGCTGCTTCTCTTGCTGCTCGCCTTTGTCAAAAAGTCCAAAAAGCACTGTTGCAAGCAGATGTTCAATCAAAGTCTGACAAATCTCCAGTGACGGTGGCTGATTATGGCTCACAGGCCGTGGTTAGCGTTGTTTTGCAGAAAGAGTTGTGTTCTGCTTCATTTTCATTAGTGGCTGAGGAGGACTCTGGAGACCTTCGTAATGAAGAGGGAAAATCAACATTACAGCGTATCATGAAGCTTGTCAATGAAACACTTGCTAGTGATGGAACATATGGTACTGCCCCATTATCTGAAGAAGATGTCCTTGCTGCCATTGATAGTGGTAGATCTGAAGGGGGTCCTTCTGGTCAGCACTGGGTGTTGGATCCTATTGATGGTACTAAAGGGTTTCTAAGGGGAGACCAATATGCAATTGCATTGGGATTGCTAGATGAAGGGAAGGTGGTTTTGGGCGTCTTAGCCTGTCCAAATCTTCCATTATCTTCTCTTGCCTCCCACAATCTACAGGATGATCAAGACAAAGTTGGTTGCCTTTTTTATGCCCAAGTTGGTTCTGGAACTTATATGCAGTCTCTTGATGGCTCTACACCAATAAAGGTGCATGTAACTGATTTAGACAACCCTGAAGAGGCATCTTTTTTTGAATCTTTTGAAGCAGCACATTCTTTGCATGACCTATCTAGTTTGATAGCAAAGAAACTTGGTGTAAAAGCCCCCCCAGTTCGAATAGACAGCCAGGCAAAGTATGGTGCTTTGTCCCGTGGAGATGGAGCAATATATCTGCGGTTTCCTCATAAAGGCTACCGCGAGAAGATATGGGATCATGCTGCTGGATATCTCGTTGTTGCAGAAGCTGGAGGTGTTGTCTCAGATGCTGCAGGAAACCCTTTGGACTTCTCCAAGGGAAGATACCTTGATTTACACGAAGGCATAATCGTTACCAATCAAAAGCTGATGCCTGCTCTCCTCAAGGCTGTTAAAGAATCTTTGAATGAGAAAGCTTCATCCTTGTGATGATCAAACCAATAACAATACGCTGCAGCTATCTTATTGTAGTTCCCAGAATGGTACTTGCAGCTGCTCATTTTCACCTGTTCTTCTCCTTCTACACATTTCTGATATCACTTTTTAGCTCTTTGATTGTCATCTCAACTCAGCTTTGATAAACATTTTGTTGTTCTCTGGTTATGTCAACTCAACTTTGATTAAACATTATATATTTCTCTTGTTATGTTTTTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g056490.2.1SL2.50ch05:65760983..65766393350-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g056490.2SL2.50ch05:65760759..657667265,968-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g056490.2.1.1SL2.50ch05:65766328..65766726399-n/a
exonexon:Solyc05g056490.2.1.2SL2.50ch05:65764648..6576472376-2
exonexon:Solyc05g056490.2.1.3SL2.50ch05:65764293..6576436674-n/a
exonexon:Solyc05g056490.2.1.4SL2.50ch05:65763303..65763508206-1
exonexon:Solyc05g056490.2.1.5SL2.50ch05:65762710..65762920211-n/a
exonexon:Solyc05g056490.2.1.6SL2.50ch05:65762523..6576262199-n/a
exonexon:Solyc05g056490.2.1.7SL2.50ch05:65762248..65762401154-2
exonexon:Solyc05g056490.2.1.8SL2.50ch05:65760759..65761147389-n/a
intronintron:Solyc05g056490.2.1.2SL2.50ch05:65764724..65766327n/a-n/a
intronintron:Solyc05g056490.2.1.3SL2.50ch05:65764367..65764647n/a-n/a
intronintron:Solyc05g056490.2.1.4SL2.50ch05:65763509..65764292n/a-n/a
intronintron:Solyc05g056490.2.1.5SL2.50ch05:65762921..65763302n/a-n/a
intronintron:Solyc05g056490.2.1.6SL2.50ch05:65762622..65762709n/a-n/a
intronintron:Solyc05g056490.2.1.7SL2.50ch05:65762402..65762522n/a-n/a
intronintron:Solyc05g056490.2.1.8SL2.50ch05:65761148..65762247n/a-n/a
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Related viewsNone found
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