Solanum lycopersicum mRNA Solyc05g056310.2.1

mRNA details  
Name
Solyc05g056310.2.1
Type
mRNA
Length
1,961
Organism
Solanum lycopersicum
Description
T-complex protein 1 subunit gamma (AHRD V1 ***- B6UCD0_MAIZE); contains Interpro domain(s) IPR012719 T-complex protein 1, gamma subunit
Location(s)
SL2.50ch05:65645697..65652959
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0044267
  • GO:0006457
Length
7263
Nb exon
13
Sifter term
GO:0051082
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g056310.2.1 T-complex protein 1 subunit gamma (AHRD V1 ***- B6UCD0_MAIZE); contains Interpro domain(s) IPR012719 T-complex protein 1, gamma subunit

ATGCATGCTCCAGTTCTTGTTATGCAGGATTCTATGAAACGCGAGCAAGGTGGCAAGGTTCAGCGGGCGAATATTCAGGCGGCAAAGGCTGTTGCTGACATTATCCGTACCACTTTGGGACCACGATCCATGTTAAAAATGCTCCTTGATGCTGCTGGAGGAATTGTAGTAACCAATGATGGAAATGCAATTCTCCGTGAGCTAGATCTTGCTCATCCTGCAGCCAAGTCAATGATTGAACTAAGCCGCACCCAAGATGAAGAGGTAGGAGACGGAACAACATCAGTAATTGTCCTTGCTGGTGAGATGCTCCATGTTGCGGAAGCTTTTATTGACAAGAAGTATCATCCTACAGTAATATGTAGAGCTTATGCCAAAGCTCTTGAAGATGCTGTTGCCGTGCTTGACAAAATTGCAATGACAGTTGATGTTGAAGATCGTGAAACAATGTTGGGTTTGGTTAAGAGTTGCATCGGCACAAAATTTACTAGTCAATTTGGGGATTTAATTTCAGATTTAGCAATTGATGCCACAAGAATGGTTGGTGTGGAACTTGGCCAAGGGTTACGCGAGGTGGACATCAAGAAGTACATCAAGATTGAGAAGGTGCCTGGTGGGCAGTTGGAAGACTCTGTGGTGCTTAAAGGAGTAATGATGAACAAAGATGTAGTTGCCCCTGGCAAAATGAAGAGAAAGATTGTAAACCCTCGCATCATTCTACTTGATTGTCCCCTAGAGTACAAGAAAGGTGAGAACCAAACAAATGCAGAGCTCCTTAGAGAGGAGGATTGGACTGTCCTCTTGAAAATGGAAGAAGAGTACATTGAGAACATGTGCGCACAGATACTTAAATTCAAGCCGGATGTGGTTATTACTGAAAAGGGACTCAGTGATCTGGCATGCCATTATCTGTGCAAGGCTGGTGTCAGTGCAATCAGAAGGCTAAGGAAGACAGACAATAACAGAATTGCTAAGGCATGTGGGGCAGTTATTGTTAATAGACCTGATGAGTTGCAAGAATCTGATGTTGGTACTGGTGCCGGTCTGTTTGAAGTGAAAAAAATTGGGGATGAGTTCTTTACTTTTATTGTTGATTGCAAGGATCCGAAAGCATGTACTATACTTTTAAGGGGTGCGAGCAAAGATCTACTGAATGAAGTAGAAAGAAATCTACAGGATGCCATGTCTGTCGCTAGAAACATCATCAAGTGTCCTAAGCTAGTTCCCGGTGGTGGTGCAACAGAGTTAACTGTATCTGCCATGTTAAAGCAGAAAAGTTCATCCGTTGAAGGCATAGAAAAGTGGCCGTATGAAGCTGCTGCAATTGCTTTTGAAGCTATACCACGAACTTTGGCTCAGAACTGTGGTGTAAATGTGATTCGTACTATGACCGCTCTTCAAGGAAAGCATGCAAATGGCGAGAATGCATGGATAGGCATTGATGGAAACACTGGTGAGATTACCGACATGAAAGAGCGGAAGATATGGGATTCCTATGCTGTAAAAGCACAGGCTTTTAAAACTGCCATTGAAGCTGCTTGCCTACTTCTGAGAATTGATGACATTGTGAGTGGAATAAAGAAGAAGCAAGCCCCTGGAGCAGGACAAGGTCCATCAAAACCAAAAATAGACGAAGAAGGTGATGCAGACAATGACCAGCTAATTCCGGAATGAACATGATATACTATGCTGCAATGGAAATGCTTATGCATTTGATAACCACTTGGAAGTTTTCATCTACTTCAGTATAGTCTGCCCTTGACTGATTGCTTGAACTTTTTGTGCTTGACATGTAACTTCTGCTGTTTTTGACTGCTGGCAGTTGTTGGTTGTATTTGAAATAGATTTTGTTTCAGTTTTTGGTTTTAAATTAAATTTGATGTTGCAAGTACAATGACTAATCAATGTAGGGGTATCATGTTTTTCAAGGATCCAACAAATTGAAGGCCATACAAATCAAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g056310.2.1SL2.50ch05:65645696..65652672558+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g056310.2SL2.50ch05:65645697..656529597,263+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g056310.2.1.1SL2.50ch05:65645697..6564572125+n/a
exonexon:Solyc05g056310.2.1.10SL2.50ch05:65651798..65651923126+n/a
exonexon:Solyc05g056310.2.1.11SL2.50ch05:65652064..65652168105+n/a
exonexon:Solyc05g056310.2.1.12SL2.50ch05:65652252..6565232675+n/a
exonexon:Solyc05g056310.2.1.13SL2.50ch05:65652481..65652959479+n/a
exonexon:Solyc05g056310.2.1.2SL2.50ch05:65647105..6564716662+2
exonexon:Solyc05g056310.2.1.3SL2.50ch05:65648184..6564825673+n/a
exonexon:Solyc05g056310.2.1.4SL2.50ch05:65648352..6564841968+2
exonexon:Solyc05g056310.2.1.5SL2.50ch05:65648633..6564870270+n/a
exonexon:Solyc05g056310.2.1.6SL2.50ch05:65649480..6564954869+2
exonexon:Solyc05g056310.2.1.7SL2.50ch05:65649625..6564969672+2
exonexon:Solyc05g056310.2.1.8SL2.50ch05:65650242..6565031574+2
exonexon:Solyc05g056310.2.1.9SL2.50ch05:65651056..65651718663+n/a
intronintron:Solyc05g056310.2.1.1SL2.50ch05:65645722..65647104n/a+n/a
intronintron:Solyc05g056310.2.1.10SL2.50ch05:65651924..65652063n/a+n/a
intronintron:Solyc05g056310.2.1.11SL2.50ch05:65652169..65652251n/a+n/a
intronintron:Solyc05g056310.2.1.12SL2.50ch05:65652327..65652480n/a+n/a
intronintron:Solyc05g056310.2.1.2SL2.50ch05:65647167..65648183n/a+n/a
intronintron:Solyc05g056310.2.1.3SL2.50ch05:65648257..65648351n/a+n/a
intronintron:Solyc05g056310.2.1.4SL2.50ch05:65648420..65648632n/a+n/a
intronintron:Solyc05g056310.2.1.5SL2.50ch05:65648703..65649479n/a+n/a
intronintron:Solyc05g056310.2.1.6SL2.50ch05:65649549..65649624n/a+n/a
intronintron:Solyc05g056310.2.1.7SL2.50ch05:65649697..65650241n/a+n/a
intronintron:Solyc05g056310.2.1.8SL2.50ch05:65650316..65651055n/a+n/a
intronintron:Solyc05g056310.2.1.9SL2.50ch05:65651719..65651797n/a+n/a
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