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Solanum lycopersicum mRNA Solyc05g056040.2.1

mRNA details  
Name
Solyc05g056040.2.1
Type
mRNA
Length
2,280
Organism
Solanum lycopersicum
Description
Auxin response factor 14 (AHRD V1 *-*- D9HNU1_MAIZE); contains Interpro domain(s) IPR003340 Transcriptional factor B3
Location(s)
SL2.50ch05:65422556..65428132
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0006355
Length
5577
Nb exon
11
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g056040.2.1 Auxin response factor 14 (AHRD V1 *-*- D9HNU1_MAIZE); contains Interpro domain(s) IPR003340 Transcriptional factor B3

AAAAGATTGTCTTTAGTGGTTCCCTTTAGCAAGTTGTATACTTTTTTTGTGCTTTGATTATGGTTGATCAATTGCGGTTTTCACAGCAGAAATACCTAAATCATATGCCATTTAAAGGTGATGATGATCTGTGTAGGGAAATATGGAAGGCCTGTTCTGGTTCATTGTTGGATGTTTCAAAGGCTGGGGAGAGAGTATACTACTTTCCAAGACTTCATGTGGAGCAGCTGGAGCAATCATCCAACCAGGAGCTGATTGAAAAACTACAATTGTCCAACTTACCTCCAAAGATCCTTTGTCGTGTTCTTCATATTCGTCTTCTGGTTGAACATGAGACGGAAGAGGTTTATGCTGAGACCATATTAATTCCAAATCAAGATCAAAATGAGCCAACAGCTGCGGATTTTAGTCCTCTAGACAATCCAAGGCCCCAGTTCCAGTCGTTTTGCAAGTGTTTGACTCAATCTGATATAAAAAGCAATTGGGGACTGTCTGTGCCCCTGAAAGATGCTGTCAAATGCTTTCCTCCCTTGGACATGCGACAAGAAAAACCATGCCAAGAACTGATAGCAAAGGATCTTAAAGGAAATGAATGGCGCTTTAAACATGCACACCAAGGCCAACCACGGAGGCATTCACTCACAAATGGCTGGAGTACATTCGTTACTAGTAAGAAATTGCTTGCCGGAGATTTAGTTGTGTTCTTAAGGGATGAAACTGGCAAACTACATGTTGGGATTAGACGTTTATCTTATCAACACTGTTCTGTTGGAGCATCAACATTTTCAAGACAAAGCATGGAAGTGGTTCTTGCTGTTGCTTCTCATGCCTTCGCAACCAAAAGTCTCTTTTTTGTTTACCAGAAGCCATGTTACAATAAATCAAGTCAATTTATTATGAGCATGAGCAAGTATTTTGAAGGTGGAAACCATGGCATTGGAGTTGGCATGATCTCTCGAATGCAAATTGAGAGTGAGGACTACTGTCATGTGAGAAGAACAAATGATCTGGAACAGATATCTTTGTCTCAGAGTCAACAGACCACAAATTTTATGCTCGAGGAGGATCAGTACATGCAAGACTCGGAAGCAGTACTTGATTGTGCTCAATCTACTATGATAGATTTGGAGATCAGGCAGCAGACAATTGGGTCGCTTAATAATATCCATTGTTTTGCCCCTGTAGAGGACAATGGACTGCAACTGCATGCAGCAGTCGCAAGGGAGAATAATGAGGGATCTATTCCAAAAGACACTGTAAGCACCCACACTAGAGATGAGGACTTGTATGAACTATTCAAGGATTTTGACTTTCCAGACTCTACAAACACTAGTCTCGATACTATAGCTTTGGATTTGGGCAGTGATTGGTTCAGATCAACGCTACAAGAGCAAGAAGAGACTGTTACTCCCAGTCAGCCAAATGCCTCAGAAGATCACTCTAGACGGACTTCTTCTGTATTGGAGCATCCGAATTCCTTCCGAGTGATGTCTATCTCTTCAAACCCGAGTCAGATTCCCTACGAAGGACCTGGTCGTGGTGATGAGCAAGTTCCTTGGGGAGGCTATCAAGTAGCACGACGAACTTTACCAATACTCAGTAGGGTTGTCTCGCGGTACCCTGATTCCCTCGTGAACTTCAGGGTAGCAAGTAGCATACTTCAGTCAGTGTATTTGGAAATATTGGCAGAGTTAGTCTACTTTCTTGATAATCTTACAATAGTGAACTTGTCAAAGGATCAGTTCAATGTTGCTAGGCAACATATCTGGGACCTAAAGTTAAGTGGCATTGAAATAGGCTGGCTTGAAAACCGTTTACTGCATATCGATGAAGTATTTAGCATGGAAAGTTTACTGCAACGGCGACAAGCACTCACACGTAGAATGGAGGAGACATTTAAGCAGCTGGATGGGGAACTTGGATGTATAGACAAGGAGCTTCATGAACTATCTCTAAAGGTTGGCCCTAATTCCCCTATGAGATTGCAATCTGTCTTGGAGGGTTTGTTGTAGTTTCCAGTGATGTTATCCTTTGTATTTGACTACATGATAAAGAGAAAAAGCCGGACATAGTCCATTATCTTTGGGCGGAGGCTCAAAATGATCGTATTTCTTTCACACGAGCAACCAATTTGTTAGAAAATGACGACTATTGATGCTCCATGCAAGAGAGATACGATCATTTTGATCTCAAGTTCAAAGAATATGGACTATTTTGGGTTTTTTCTGTAATGATAGGAACTCTTACGATTAGAGGTGAAGTCGAGTTTTTCAGTTTATG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g056040.2.1SL2.50ch05:65422823..65428073651-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g056040.2SL2.50ch05:65422556..654281325,577-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g056040.2.1.1SL2.50ch05:65428016..65428132117-2
exonexon:Solyc05g056040.2.1.10SL2.50ch05:65423948..65424339392-2
exonexon:Solyc05g056040.2.1.11SL2.50ch05:65422556..65423446891-n/a
exonexon:Solyc05g056040.2.1.2SL2.50ch05:65427622..65427731110-n/a
exonexon:Solyc05g056040.2.1.3SL2.50ch05:65427340..6542743596-n/a
exonexon:Solyc05g056040.2.1.4SL2.50ch05:65425978..6542603457-n/a
exonexon:Solyc05g056040.2.1.5SL2.50ch05:65425745..65425897153-n/a
exonexon:Solyc05g056040.2.1.6SL2.50ch05:65425317..6542540185-2
exonexon:Solyc05g056040.2.1.7SL2.50ch05:65424925..6542501591-1
exonexon:Solyc05g056040.2.1.8SL2.50ch05:65424631..65424801171-1
exonexon:Solyc05g056040.2.1.9SL2.50ch05:65424427..65424543117-1
intronintron:Solyc05g056040.2.1.10SL2.50ch05:65424340..65424426n/a-n/a
intronintron:Solyc05g056040.2.1.11SL2.50ch05:65423447..65423947n/a-n/a
intronintron:Solyc05g056040.2.1.2SL2.50ch05:65427732..65428015n/a-n/a
intronintron:Solyc05g056040.2.1.3SL2.50ch05:65427436..65427621n/a-n/a
intronintron:Solyc05g056040.2.1.4SL2.50ch05:65426035..65427339n/a-n/a
intronintron:Solyc05g056040.2.1.5SL2.50ch05:65425898..65425977n/a-n/a
intronintron:Solyc05g056040.2.1.6SL2.50ch05:65425402..65425744n/a-n/a
intronintron:Solyc05g056040.2.1.7SL2.50ch05:65425016..65425316n/a-n/a
intronintron:Solyc05g056040.2.1.8SL2.50ch05:65424802..65424924n/a-n/a
intronintron:Solyc05g056040.2.1.9SL2.50ch05:65424544..65424630n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17834989%2Fdetails feature 17834989
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