Solanum lycopersicum mRNA Solyc05g054230.2.1
 mRNA details
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| Name | Type |
Length
1,382
|
Organism |
|
Description
Nudix hydrolase 2 (AHRD V1 **-- B6U183_MAIZE); contains Interpro domain(s) IPR000086 NUDIX hydrolase domain
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|
Location(s)
SL2.50ch05:64188511..64195808
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0005576
- GO:0016787
- Length
- 7298
- Sifter term
- GO:0008083
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc05g054230.2.1 Nudix hydrolase 2 (AHRD V1 **-- B6U183_MAIZE); contains Interpro domain(s) IPR000086 NUDIX hydrolase domain
CCTTCCTCTCTCCCTATCTCCACGTTTACTCATTTTTTTATTGAATTGGAGATCCATCCTCATTCTTCCATTATTATTCATTTTTAATTACTAAAGTATAATTTTTATATGCATATTTTTTTCCCAATAGCAATAGATGATAATCAAATTTATATGTCGTTCTACTTTTCTTTCACCAAGAACTTCATTTTTTAGCTCAAAACGTCACTTCTTCTCTTGCCGTCCGGTGAAACTCAGTTTCTGCCAAAATCAAGGCAAATTGACCAAGATTAGGTGTGGAATTATTAATCTAAATACAAGGTCATCAATGAGTTGCTCTGCAACTCCAGCAATGGCAAAGGAGAAAGAAATGGAACAAGTGGATAAAATATTAGCTGCAAAAGAGGATGACTATGGTGGGGTGACGGTTGAAATGACTAATGAGCCATTGGACCCTTCTGTCTTTGCTTCTTTGCTTAGAGCTTCACTTTCTCATTGGAGACAACAGGGTAAAAAAGGTGTTTGGATCAAATTGCCTATTGAGCTTGTAATGCTTGTTGAACCTGCTGTCAAGGAAGGATTTTATTACCACCACGCAGAACCAAAATACTTGATGCTTGTGAGTTGGCTGCCTGGAACTGCTAACACTATTCCAGCAAATGCTACACATAGAGTGGGTATTGGTGCTTTCGTAGTGAATGAAAGGAATGAGGTGCTAGTTGTCCAAGAAAAGAGTGGACGATTCCGTGGAACCGGTGTGTGGAAGTTTCCTACCGGAGTTGTTGATGAGGGTGAAGATATATCTGATGCAGCTGTCAGAGAAGTGAAAGAAGAGACAGGGGTTAATGCGAAGTTTGTAGAATTACTGGCATTCAGGCAAAGTCACAAGTCATTCTTTGACAAGTCAGATCTATTTTTCGTCTGCATGCTGCAACCTCTTTCCCATGATATCCAGATGCAAGAGAGAGAAATAGAGGCTGCCCAGTGGATGCCATTTGAACAATATGCAGCTCAGCCATTTGTCCAAGGACATGATCTTCTCAGATACATCTCTGACATATGCTCGGCGAAGATGGAGGGTAGGTATACAGGCTTCTCACCAGTTCCTACAGTAACCGGTTTTTCTGCAAAGAAAACCTACTTGTACATGCACGGCAATGTCAGAACAACCGGTAGCAGCAACGACCCCTAATATATGGATAGAAAGTTCGAGTCACCGTGACTTCAATGAAGTTTATAAAGGTGCAAGTCGTTTTTAGTATTGATGGAATAAACATGGGATCAAAAATGATGTGATGGAAACATTGGTTTTCAGGCTTACATTTTTGTATATTATACATGATTCTTCAAGTGTACATCAACAATTATTTGTGTATTCAAGTTTCTTTGATTGGCCTTGGCTC
CCTTCCTCTCTCCCTATCTCCACGTTTACTCATTTTTTTATTGAATTGGAGATCCATCCTCATTCTTCCATTATTATTCATTTTTAATTACTAAAGTATAATTTTTATATGCATATTTTTTTCCCAATAGCAATAGATGATAATCAAATTTATATGTCGTTCTACTTTTCTTTCACCAAGAACTTCATTTTTTAGCTCAAAACGTCACTTCTTCTCTTGCCGTCCGGTGAAACTCAGTTTCTGCCAAAATCAAGGCAAATTGACCAAGATTAGGTGTGGAATTATTAATCTAAATACAAGGTCATCAATGAGTTGCTCTGCAACTCCAGCAATGGCAAAGGAGAAAGAAATGGAACAAGTGGATAAAATATTAGCTGCAAAAGAGGATGACTATGGTGGGGTGACGGTTGAAATGACTAATGAGCCATTGGACCCTTCTGTCTTTGCTTCTTTGCTTAGAGCTTCACTTTCTCATTGGAGACAACAGGGTAAAAAAGGTGTTTGGATCAAATTGCCTATTGAGCTTGTAATGCTTGTTGAACCTGCTGTCAAGGAAGGATTTTATTACCACCACGCAGAACCAAAATACTTGATGCTTGTGAGTTGGCTGCCTGGAACTGCTAACACTATTCCAGCAAATGCTACACATAGAGTGGGTATTGGTGCTTTCGTAGTGAATGAAAGGAATGAGGTGCTAGTTGTCCAAGAAAAGAGTGGACGATTCCGTGGAACCGGTGTGTGGAAGTTTCCTACCGGAGTTGTTGATGAGGGTGAAGATATATCTGATGCAGCTGTCAGAGAAGTGAAAGAAGAGACAGGGGTTAATGCGAAGTTTGTAGAATTACTGGCATTCAGGCAAAGTCACAAGTCATTCTTTGACAAGTCAGATCTATTTTTCGTCTGCATGCTGCAACCTCTTTCCCATGATATCCAGATGCAAGAGAGAGAAATAGAGGCTGCCCAGTGGATGCCATTTGAACAATATGCAGCTCAGCCATTTGTCCAAGGACATGATCTTCTCAGATACATCTCTGACATATGCTCGGCGAAGATGGAGGGTAGGTATACAGGCTTCTCACCAGTTCCTACAGTAACCGGTTTTTCTGCAAAGAAAACCTACTTGTACATGCACGGCAATGTCAGAACAACCGGTAGCAGCAACGACCCCTAATATATGGATAGAAAGTTCGAGTCACCGTGACTTCAATGAAGTTTATAAAGGTGCAAGTCGTTTTTAGTATTGATGGAATAAACATGGGATCAAAAATGATGTGATGGAAACATTGGTTTTCAGGCTTACATTTTTGTATATTATACATGATTCTTCAAGTGTACATCAACAATTATTTGTGTATTCAAGTTTCTTTGATTGGCCTTGGCTC
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc05g054230.2.1 | SL2.50ch05:64188721..64195672 | 345 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc05g054230.2 | SL2.50ch05:64188511..64195808 | 7,298 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc05g054230.2.1.1 | SL2.50ch05:64195555..64195808 | 254 | - | 2 |
| exon | exon:Solyc05g054230.2.1.2 | SL2.50ch05:64194712..64194944 | 233 | - | n/a |
| exon | exon:Solyc05g054230.2.1.3 | SL2.50ch05:64192965..64193030 | 66 | - | n/a |
| exon | exon:Solyc05g054230.2.1.4 | SL2.50ch05:64192741..64192878 | 138 | - | n/a |
| exon | exon:Solyc05g054230.2.1.5 | SL2.50ch05:64191691..64191768 | 78 | - | n/a |
| exon | exon:Solyc05g054230.2.1.6 | SL2.50ch05:64191525..64191575 | 51 | - | n/a |
| exon | exon:Solyc05g054230.2.1.7 | SL2.50ch05:64191371..64191405 | 35 | - | 1 |
| exon | exon:Solyc05g054230.2.1.8 | SL2.50ch05:64189948..64190056 | 109 | - | n/a |
| exon | exon:Solyc05g054230.2.1.9 | SL2.50ch05:64188511..64188928 | 418 | - | n/a |
| intron | intron:Solyc05g054230.2.1.2 | SL2.50ch05:64194945..64195554 | n/a | - | n/a |
| intron | intron:Solyc05g054230.2.1.3 | SL2.50ch05:64193031..64194711 | n/a | - | n/a |
| intron | intron:Solyc05g054230.2.1.4 | SL2.50ch05:64192879..64192964 | n/a | - | n/a |
| intron | intron:Solyc05g054230.2.1.5 | SL2.50ch05:64191769..64192740 | n/a | - | n/a |
| intron | intron:Solyc05g054230.2.1.6 | SL2.50ch05:64191576..64191690 | n/a | - | n/a |
| intron | intron:Solyc05g054230.2.1.7 | SL2.50ch05:64191406..64191524 | n/a | - | n/a |
| intron | intron:Solyc05g054230.2.1.8 | SL2.50ch05:64190057..64191370 | n/a | - | n/a |
| intron | intron:Solyc05g054230.2.1.9 | SL2.50ch05:64188929..64189947 | n/a | - | n/a |
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