Solanum lycopersicum mRNA Solyc05g052700.2.1

mRNA details  
Name
Solyc05g052700.2.1
Type
mRNA
Length
1,575
Organism
Solanum lycopersicum
Description
TPR domain protein (AHRD V1 *--- Q7MVN6_PORGI); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical
Location(s)
SL2.50ch05:62905342..62908461
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005488
Length
3120
Nb exon
3
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g052700.2.1 TPR domain protein (AHRD V1 *--- Q7MVN6_PORGI); contains Interpro domain(s) IPR011990 Tetratricopeptide-like helical

ATACTAATTATGAAACTCCAAAATTCTCTTCTTCTTCAATCCTCTTCTCCTTCAACCCTTTCTTTTCTCAATTCATCTCCAAAATCAAACAAATGGGGTCATAAAAATCCAAACTTTATTTGTAAACTTGTTCTTTTTAGCCCAAAATCACTTGGTTCACAATATTTTGAGAAAAATGAGTCTAAAGGTCATAGTAGAAGCATACAACCATGTTGTTGTAGTTCAAGATTTGATGAAGAAAAATTTGATGGTGAAGGGATTGAAAGAGGGGAAAATGAAGGGTCTTGTGCAATTTTTGGGAGTAAAGATTCAATTTTTCCATCAAAATTTGAGTCTCTTGAGCCAAGTTTGTTTGGTATTGAGGCAGAACCAGAAGCACCCTATTGGCCAGAAAGGGAGGAAGTTTTATGGGCACATATAGAACAAAAAGCCAAAAGTTTTGGACTTCCTTTGTCACTTAGAATGATGCAAAAGAAACATCAATGGGAATCTTGTAGATTTAAAGATTTAAAGGTAACAAATTCTTGCACATCAAAGGCTTTAAATTCATTGGTATTTATTATTGTGGAGCTGCAAACTTATGCATTGCATATGAGGGAATCAATTTGTAATGAAGATTTAGAAATGATTATTGATAAAGTGCAAAGGGATATGTATGCATCATTTGTATGTCTTTTTCGACAAGTATTTTCGCAAACACCTATGTTAATGATGGAGGTAATGACTCTCTTGGCTAACTTTAGTGTTTACTCTGCTTCTGGTGAGAATTGTGATCAACCATATCTAAAAGTTCATTATCCTGATATTGTTCCTCAAGATGTGTCAAAAGTAGTGTGGACTGATGAAGAGAAAGAATTGTGGGATTCAATACAAGATGAAGCTTTGAATATGAGGGGTGGTTCAAGGGGCATTGATTTTGATAATGAAGTCATGTCGAAGTTTGTTTCGCCATTGTCAGTGGAGATTGAACCAGATAATAGTGTTGACTATTATAAGACTGATCTTGTTTATCAGATGAATCTCACACATGAGCCTAATAACACTCTTTTGCTATGCAATTATGCAAACTTTCTGAAAGTCTTCGTTCGAGATAATAATAGGGCGGAGGAGTGCTTCAAACGGGCAGTCCAAGTGGAACCACCGGATGCAGAGGCCCTATGTCAGTACGCGATCTTCTTGTGGAAGGTTAAGAACGATTTATGGGGAGCAGAAGAAAAATACCAACAGGCAGTGGCAGCTGAGCCTAGGAACCCTTATTATAGATGTACATATGCCAATTTCTTGTGGAACACGGGTGGCGAGGAAACTTGTTTCCTTCCAAGTAGTACTTCTTCTATCAATAACAAGAAGGGTGAAGAAGTTTAGTCGTAACAGAGAAAAATTGTTCAAGAAATGCATCAAACTAAGGAGAAAAATGGGAAATGGCTATATTATTTGTTCTTGATTTTCTGTGTCTAGATTGAGTAGAGTGATTTGCATGGGAGCTGTTCACCACCACCAACAACAACATCTACGGTTCAGTACCAAACAAGTTGAGGTCGACTATATGAATCTGTACTGTCATAGTTCGAGGTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g052700.2.1SL2.50ch05:62905350..62908119452+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g052700.2SL2.50ch05:62905342..629084613,120+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g052700.2.1.1SL2.50ch05:62905342..629064411,100+n/a
exonexon:Solyc05g052700.2.1.2SL2.50ch05:62907855..62908171317+n/a
exonexon:Solyc05g052700.2.1.3SL2.50ch05:62908304..62908461158+1
intronintron:Solyc05g052700.2.1.1SL2.50ch05:62906442..62907854n/a+n/a
intronintron:Solyc05g052700.2.1.2SL2.50ch05:62908172..62908303n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17831275%2Fdetails feature 17831275
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