Solanum lycopersicum mRNA Solyc05g052110.2.1

mRNA details  
Name
Solyc05g052110.2.1
Type
mRNA
Length
1,472
Organism
Solanum lycopersicum
Description
Pectinesterase (AHRD V1 **** D8VPP5_OLEEU); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic
Location(s)
SL2.50ch05:62428379..62433121
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005618
Length
4743
Nb exon
5
Sifter term
GO:0030599
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g052110.2.1 Pectinesterase (AHRD V1 **** D8VPP5_OLEEU); contains Interpro domain(s) IPR000070 Pectinesterase, catalytic

TTACGCAATCAAACACTCATTAAAATATGAGTAGTTACCTCAATTTTCTTTTGTTAAAATTTATAAAAAAAAATTAAACCAAAAATATTTCCCATTCAAGAAACTAAGAAACTAAAAAATCCAAAAGAAAATATTAAAAATGGCTGGAAAAAATACCATATTTGTTGTGGAAACAATTATCATAACATTTCTTTTATTAAATATTATTGAAGTATTTTCTGATGATTTAGTTCCAATTCCAGCTGATAAATCACAATTAAATAGTTGGTTTGAAGCTAATGTTAAGCCATTAGATGCAAGAAAAGACACTTTAGACCCTGCCCTTGTAGCTGCTGAGGCTAATAAAACTATCATTAAGGTTAGGACATATGGAAGTGGTGATTTCAAGACTATAACAGAAGCTGTCAAAAGTATTCCAGAAGGGAATAAAAAAAGAGTTATTATTTGGATTGGAAGTGGAAATTACACTGAAAAAATTAAAATTGAGAGAACAAAGCCTTTTGTTACATTATATGGAGACCCTAAAAATGTTCCAAATATTATATTCCATGGAACTGCACAAGAATATACTACTGTTGACAGTGCCACTGTCATTGTTGAATCTGAATATTTCAGTGCTGTCAATATCAATTTCGTGAATACAGCACCAAGACCAGATGGGAAAAGTGACAAAGCTCAAGCAGCAGCATTGAGGACAGGAGGAGATAAAGCCTCGTTGTATAATTGTAAAATGTTTGGATTTCAAGACACTTTTTGTGATGATAGTGGAAAACATTTCTTTAAAGATTGTTATATTGAAGGCACTGTTGATTTCATCTTTGGAAATGGCAAATCCTTGTATCTGAATACAGAGACACATGTAATTCCAGGGGATCCAATGGCAATGGTGACAGCACAAGCAAGGGCAGTAGAAAATTTTGACAGTGGATTTTCTTTTGTACATTGTATGATTACTGGTACTGGAAATACAGCATATTTAGGAAGGGCATGGAAACAATACTCTAAAGTTGTTTTCTCATATACTGATATGACTGATGTTATTCACCCTGAAGGATGGTCTGATTTTGGCAAAAAAGAATTTGGCAGCACGGTATACTATGGAGAATACAAGTGCAAAGGAGCAGGAGCAACTTTGGATAAAAGAGTTCCATTTACAAAGAAATTAACTGATGAAGAGGCAAAACCTTTTATTTCCCTGGCTTATATTGAAGGCTCTAAGTGGCTACTTCCTCCTGTGACACTTTAAATATTTGAAGTGTTATGATGTGGTGCTACTTTAAAACGCTTATAAAATTTTGAATTTTATTTATTTTTTTGCTGAATAATTTCTCAGTTTTTCATGTGTCTTCTTCTTATTTTGTAAAGAATGAAATGTCATTCCTTAATATCTAGTGAACTATTTAATTTACATATATGTTGTACTTCTTTTCGTATCAATAAATCGATAGGGGTCAAGTCAAACCCCATTTTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g052110.2.1SL2.50ch05:62428604..62432982369-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g052110.2SL2.50ch05:62428379..624331214,743-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g052110.2.1.1SL2.50ch05:62432764..62433121358-n/a
exonexon:Solyc05g052110.2.1.2SL2.50ch05:62431881..62432159279-n/a
exonexon:Solyc05g052110.2.1.3SL2.50ch05:62430638..62430844207-n/a
exonexon:Solyc05g052110.2.1.4SL2.50ch05:62429615..62429856242-1
exonexon:Solyc05g052110.2.1.5SL2.50ch05:62428379..62428764386-n/a
intronintron:Solyc05g052110.2.1.2SL2.50ch05:62432160..62432763n/a-n/a
intronintron:Solyc05g052110.2.1.3SL2.50ch05:62430845..62431880n/a-n/a
intronintron:Solyc05g052110.2.1.4SL2.50ch05:62429857..62430637n/a-n/a
intronintron:Solyc05g052110.2.1.5SL2.50ch05:62428765..62429614n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17830610%2Fdetails feature 17830610
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