Solanum lycopersicum mRNA Solyc05g050770.2.1
 mRNA details
|
| Name | Type |
Length
1,709
|
Organism |
|
Description
Serine carboxypeptidase 1 (AHRD V1 ***- B6TC80_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase
|
|
Location(s)
SL2.50ch05:60923207..60932894
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0006508
- Length
- 9688
- Nb exon
- 14
- Sifter term
- GO:0016754
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc05g050770.2.1 Serine carboxypeptidase 1 (AHRD V1 ***- B6TC80_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase
TTACAGTAGAGAATTTTCTATCAAAAAATTAGAAACAAATTCAAAATTTTAAAATATTAATTTGACATTGAATTTCAATAAACTCGCTACGAATATTTTGAATCCGTCACCGTAAAAAGATGTCTTGGCTCCCAATTCTCATGTTAATAGTTGCATTTGAGATCATATGCCAACAGCCTGCTCTAGCTGGTTTGTCTGTCAAGTATCTTCCGGGATTTGAAGGACAACTTGCCTTTCAACTTGAAACGGGGTATATAGGAGTAGGTGAAGCAGATGAGGTGCAAGTCTTCTATTATTTTATAAAGTCAGAATCTAATCCTAAAGTCGATCCACTTATTTATTGGTTTACGGGAGGTCCCGGTTGCTCTGCATTGAGTGCCATTTTTTTCGAATTTGGACCCATCACATTGGACACTAGAGCTTATAATGGGAGCTTGCCCACGTTGTCTTTAAATCCATATGCATACACAAAGGTGGCAAGCATAATTTTTGTGGATTTGCCAGTGGGGACTGGATTTTCCTATGCAACAACACAAAAAGCAAATTACTCAGATAATTTACTATCAGCTGATCATGCTTATGAATTTATTCGAAAGTGGTTAATTGAACATCAAGAATATCTCAATAATCCTTTTTATGTTGGTGGAGACTCATATAGTGGAATTACAGTTCCTATTGTTACTCAATTCATATCAAATGGTAATGATATGGGAATCAAGCCATGGATCAATCTTAAGGGATATATTTTAGGCAATCCAGTAACATTTGCTGGTCAAGATTACTATATCATACCTTTTGCTCATGGGATGGGCCTAATTTCTGATGAACTATACGAGTCATTAGTGACTAATTGTGAAGGAGAGTTGATATATAGAGATCGACCTATAATCAACCCACTTTGTTCAAGGGACATGGATACTTTCAATTGGTTGACTAAGGATATTTATTTATATAATATCCTAGAGTCCCCTTGTGAACTTGTATCAAAAGATTCAAGAAGATGGTTGACTCAAAATGTTACAAAGCTCAAAAATTCTGCTACATATCCACAAGTTAAATGTCGAAAAGAATGGCATGCCCTCGCTTTGATTTGGGCCAACGATAATAATGTAAGAGATGCTCTTCATGTTCGAAAGAAAACTATTGGAGCATGGGAAGAATGCAGGGGCAACTTGTCTTTTGGAGATATTATCAACAATACTATACTATATCATTCAAATCTTAGTCGTAAAGGTTTTAGATCTCTTATTTACAGTGGTGATCACGATATGGTTGTTCCATTTATTTCAACTCAAGTATGGATTAAATCACTAAATTATTCAATTATTGATGATTGGAGGCCATGGATTGTTGATGGTCAAGTTGCAGGGTATACTAGAAGTTACTCCAATAAAATGACATTCGTGACAGTTAAGGGAGCAGGGCATACTACCCCAGAGTATAAACCTGTGCAAAGTCTTGCTATGTTAAAGCGTTGGTTATCCTATGAATCACTCTGATTTAAAGTATATTTATTGATAATATTATTTTTATATATATAAATTATGACAGCTTAATAAAGAACTTTATTTTTGAAATTATTATATTAAGTTTGGTATGAAGCACTAAAAAAATAGAATAAATTTGATTCCAAATATGTTCTTATTATGAGTGGACTAGCTTATGTTTGCCCTTCAATTCAGTAATAAAATTTATTTATTTATTGATTA
TTACAGTAGAGAATTTTCTATCAAAAAATTAGAAACAAATTCAAAATTTTAAAATATTAATTTGACATTGAATTTCAATAAACTCGCTACGAATATTTTGAATCCGTCACCGTAAAAAGATGTCTTGGCTCCCAATTCTCATGTTAATAGTTGCATTTGAGATCATATGCCAACAGCCTGCTCTAGCTGGTTTGTCTGTCAAGTATCTTCCGGGATTTGAAGGACAACTTGCCTTTCAACTTGAAACGGGGTATATAGGAGTAGGTGAAGCAGATGAGGTGCAAGTCTTCTATTATTTTATAAAGTCAGAATCTAATCCTAAAGTCGATCCACTTATTTATTGGTTTACGGGAGGTCCCGGTTGCTCTGCATTGAGTGCCATTTTTTTCGAATTTGGACCCATCACATTGGACACTAGAGCTTATAATGGGAGCTTGCCCACGTTGTCTTTAAATCCATATGCATACACAAAGGTGGCAAGCATAATTTTTGTGGATTTGCCAGTGGGGACTGGATTTTCCTATGCAACAACACAAAAAGCAAATTACTCAGATAATTTACTATCAGCTGATCATGCTTATGAATTTATTCGAAAGTGGTTAATTGAACATCAAGAATATCTCAATAATCCTTTTTATGTTGGTGGAGACTCATATAGTGGAATTACAGTTCCTATTGTTACTCAATTCATATCAAATGGTAATGATATGGGAATCAAGCCATGGATCAATCTTAAGGGATATATTTTAGGCAATCCAGTAACATTTGCTGGTCAAGATTACTATATCATACCTTTTGCTCATGGGATGGGCCTAATTTCTGATGAACTATACGAGTCATTAGTGACTAATTGTGAAGGAGAGTTGATATATAGAGATCGACCTATAATCAACCCACTTTGTTCAAGGGACATGGATACTTTCAATTGGTTGACTAAGGATATTTATTTATATAATATCCTAGAGTCCCCTTGTGAACTTGTATCAAAAGATTCAAGAAGATGGTTGACTCAAAATGTTACAAAGCTCAAAAATTCTGCTACATATCCACAAGTTAAATGTCGAAAAGAATGGCATGCCCTCGCTTTGATTTGGGCCAACGATAATAATGTAAGAGATGCTCTTCATGTTCGAAAGAAAACTATTGGAGCATGGGAAGAATGCAGGGGCAACTTGTCTTTTGGAGATATTATCAACAATACTATACTATATCATTCAAATCTTAGTCGTAAAGGTTTTAGATCTCTTATTTACAGTGGTGATCACGATATGGTTGTTCCATTTATTTCAACTCAAGTATGGATTAAATCACTAAATTATTCAATTATTGATGATTGGAGGCCATGGATTGTTGATGGTCAAGTTGCAGGGTATACTAGAAGTTACTCCAATAAAATGACATTCGTGACAGTTAAGGGAGCAGGGCATACTACCCCAGAGTATAAACCTGTGCAAAGTCTTGCTATGTTAAAGCGTTGGTTATCCTATGAATCACTCTGATTTAAAGTATATTTATTGATAATATTATTTTTATATATATAAATTATGACAGCTTAATAAAGAACTTTATTTTTGAAATTATTATATTAAGTTTGGTATGAAGCACTAAAAAAATAGAATAAATTTGATTCCAAATATGTTCTTATTATGAGTGGACTAGCTTATGTTTGCCCTTCAATTCAGTAATAAAATTTATTTATTTATTGATTA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc05g050770.2.1 | SL2.50ch05:60923325..60932684 | 460 | + | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc05g050770.2 | SL2.50ch05:60923207..60932894 | 9,688 | + | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc05g050770.2.1.1 | SL2.50ch05:60923207..60923456 | 250 | + | n/a |
| exon | exon:Solyc05g050770.2.1.10 | SL2.50ch05:60930448..60930519 | 72 | + | n/a |
| exon | exon:Solyc05g050770.2.1.11 | SL2.50ch05:60930616..60930734 | 119 | + | n/a |
| exon | exon:Solyc05g050770.2.1.12 | SL2.50ch05:60930875..60930988 | 114 | + | n/a |
| exon | exon:Solyc05g050770.2.1.13 | SL2.50ch05:60931096..60931141 | 46 | + | 1 |
| exon | exon:Solyc05g050770.2.1.14 | SL2.50ch05:60932601..60932894 | 294 | + | 1 |
| exon | exon:Solyc05g050770.2.1.2 | SL2.50ch05:60925477..60925622 | 146 | + | n/a |
| exon | exon:Solyc05g050770.2.1.3 | SL2.50ch05:60925837..60925913 | 77 | + | 1 |
| exon | exon:Solyc05g050770.2.1.4 | SL2.50ch05:60926627..60926749 | 123 | + | 2 |
| exon | exon:Solyc05g050770.2.1.5 | SL2.50ch05:60926878..60926980 | 103 | + | n/a |
| exon | exon:Solyc05g050770.2.1.6 | SL2.50ch05:60927081..60927118 | 38 | + | n/a |
| exon | exon:Solyc05g050770.2.1.7 | SL2.50ch05:60928282..60928380 | 99 | + | 2 |
| exon | exon:Solyc05g050770.2.1.8 | SL2.50ch05:60929534..60929626 | 93 | + | n/a |
| exon | exon:Solyc05g050770.2.1.9 | SL2.50ch05:60929702..60929836 | 135 | + | n/a |
| intron | intron:Solyc05g050770.2.1.1 | SL2.50ch05:60923457..60925476 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.10 | SL2.50ch05:60930520..60930615 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.11 | SL2.50ch05:60930735..60930874 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.12 | SL2.50ch05:60930989..60931095 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.13 | SL2.50ch05:60931142..60932600 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.2 | SL2.50ch05:60925623..60925836 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.3 | SL2.50ch05:60925914..60926626 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.4 | SL2.50ch05:60926750..60926877 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.5 | SL2.50ch05:60926981..60927080 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.6 | SL2.50ch05:60927119..60928281 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.7 | SL2.50ch05:60928381..60929533 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.8 | SL2.50ch05:60929627..60929701 | n/a | + | n/a |
| intron | intron:Solyc05g050770.2.1.9 | SL2.50ch05:60929837..60930447 | n/a | + | n/a |
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