Solanum lycopersicum mRNA Solyc05g026360.2.1

mRNA details  
Name
Solyc05g026360.2.1
Type
mRNA
Length
1,513
Organism
Solanum lycopersicum
Description
N-myc downstream regulated (Fragment) (AHRD V1 **-- Q177C7_AEDAE); contains Interpro domain(s) IPR015511 Pollen specific protein SF21
Location(s)
SL2.50ch05:40928819..40932266
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
3448
Nb exon
11
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g026360.2.1 N-myc downstream regulated (Fragment) (AHRD V1 **-- Q177C7_AEDAE); contains Interpro domain(s) IPR015511 Pollen specific protein SF21

TTGAGGGGAAAAAAATAAGAGAAGAGAGAATCGCTTGATATAAAAGCCATTGAAGCTCAATGGCCTCCTCTTCTTTCTTCTTCAACATATTTTCATGTATATATTGTTATAGAGAGAGAGAAGGGAGAGGCTTTTTGGTTACCTGTACACTCAGATAACCAAAAGCCATGTCTGATTCAAGCAGTGATTCCATTTCCCTCGACGTTGAGACAATCTATCTTGGTGGAAAGGAGCATATTGTACGTACTCGATGTGGTTCTGTGTCGGTTATAGTTTATGGGGACCAAGAGAAGCCGGCACTGATCACTTACCCTGATCTTGCACTAAATCATTTGTCATGTTTCCAAGGTCTCTTCTTCTGTCCAGAAGCAGCTTCTTTGCTGCTCCACAATTTTTGCATTTACCACATTAATCCTCCTGGGCATGAGCTCTTGCAGTTGGGAGCTGCAGCAATTTGTTCAGAGAGTCCTGTACCATCAGTTGATGATTTAACAGACCAGATAGTTGAGGTTCTTAATTATTTTGGGCTTGGAGCAGTGATGTGTATGGGAGTAATTGCTGGTGCTTACATACTCACCTTATTTGCCATAAAGCATAAGGAACGCGTTCTTGGTTTGATTCTTGTTTCCCCTTTATGCAGAGCACCCTCTTGGACTGAATGGTTTTACAATAAGGTCATGTCAAATTTACTATACTTCTATGGGATGTGTGGTGTTCTCGAAGAGTTTCTGCTGCACCGCTACTTCAGCAAGGAAGTTCGTGGATCTGCAGATGTTCCAGAATCAGATATAGCTCAAGCATGCAGAAGGTTGCTAGATGAGAGGCAGAAGATGAATGTTTGGCGATTTCTTCAAGCCGTTGATAGGAGACCTGATATCACAGATGGATTAAAAACACTCAAATGTCGAACCCTCATATTTGTTGGGGATGATTCTCCTTTCCATGCAGAGGCTCTCCATATGACTTCTAAATTAGATCGAAGATTAAGCGCCCTAGTTGAGGTACAAGCGTGTGGATCTATGGTGACAGAAGAACAGCCACATGCTATGTTAATACCAATGGAGTTTTTCCTCATGGGGTATGGACTATACAGACCAAATCAGTTCAATGGCAGCCCTAGAAGTCCTCTCAGTCCATCTTGCATCGCTCCTGAACTTCTTTCTCCAGAAAGCATGGGCTTAAAACTAAAACCTATTAAGACTCGGATTGCATCGAAGATGCATGGCGCATAAAAAATAAATACTGAATTCTTTTTAAACCTTGTAAAAGTTTCAAATCCCTATACTTTTCATTTCTGGTTAGTTTTTGGGGGGATATTTAAGGGTCAAAAGGAGGGTAGATATGGATTGTAGATAGGAAACTGAAATTCTTTAATGGACATAGGGAGGGAAATATTGTTATTCATTCATTGTAGGCAGAAAGGGTCATCAAACAATATTGCTATTCTGATTTTCTTGATAAAAAATATATTGATATTCTGAGTTGTACTTGCAAATCATAAAGGAGGCATTTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g026360.2.1SL2.50ch05:40928985..40931985355+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g026360.2SL2.50ch05:40928819..409322663,448+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g026360.2.1.1SL2.50ch05:40928819..40929048230+n/a
exonexon:Solyc05g026360.2.1.10SL2.50ch05:40931276..40931411136+n/a
exonexon:Solyc05g026360.2.1.11SL2.50ch05:40931755..40932266512+1
exonexon:Solyc05g026360.2.1.2SL2.50ch05:40929831..40929930100+n/a
exonexon:Solyc05g026360.2.1.3SL2.50ch05:40930065..4093016298+n/a
exonexon:Solyc05g026360.2.1.4SL2.50ch05:40930285..4093038298+2
exonexon:Solyc05g026360.2.1.5SL2.50ch05:40930468..4093052861+n/a
exonexon:Solyc05g026360.2.1.6SL2.50ch05:40930603..4093068987+1
exonexon:Solyc05g026360.2.1.7SL2.50ch05:40930772..4093084978+n/a
exonexon:Solyc05g026360.2.1.8SL2.50ch05:40930953..4093100957+n/a
exonexon:Solyc05g026360.2.1.9SL2.50ch05:40931124..4093117956+n/a
intronintron:Solyc05g026360.2.1.1SL2.50ch05:40929049..40929830n/a+n/a
intronintron:Solyc05g026360.2.1.10SL2.50ch05:40931412..40931754n/a+n/a
intronintron:Solyc05g026360.2.1.2SL2.50ch05:40929931..40930064n/a+n/a
intronintron:Solyc05g026360.2.1.3SL2.50ch05:40930163..40930284n/a+n/a
intronintron:Solyc05g026360.2.1.4SL2.50ch05:40930383..40930467n/a+n/a
intronintron:Solyc05g026360.2.1.5SL2.50ch05:40930529..40930602n/a+n/a
intronintron:Solyc05g026360.2.1.6SL2.50ch05:40930690..40930771n/a+n/a
intronintron:Solyc05g026360.2.1.7SL2.50ch05:40930850..40930952n/a+n/a
intronintron:Solyc05g026360.2.1.8SL2.50ch05:40931010..40931123n/a+n/a
intronintron:Solyc05g026360.2.1.9SL2.50ch05:40931180..40931275n/a+n/a
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Related viewsNone found
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