Solanum lycopersicum mRNA Solyc05g018700.2.1

mRNA details  
Name
Solyc05g018700.2.1
Type
mRNA
Length
1,690
Organism
Solanum lycopersicum
Description
Protein disulfide isomerase (AHRD V1 **** Q6IV17_IPOBA); contains Interpro domain(s) IPR013766 Thioredoxin domain
Location(s)
SL2.50ch05:22827490..22832816
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0045454
Length
5327
Nb exon
11
Sifter term
  • GO:0003756
  • GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g018700.2.1 Protein disulfide isomerase (AHRD V1 **** Q6IV17_IPOBA); contains Interpro domain(s) IPR013766 Thioredoxin domain

AGAAGTAGAAGGCAATAATTGAGATTTGAGGTTGATGATGAAATTTCTTGTTTTAGCAGCTCTTCTTGCTGTTACTGCTTTTGCAGCAGAAAATGAGGTTGTATGGACTTTGGACCATACTAATTACTCTCAAATTATTTCCCAGCACAAGATGATCGTTGTTCAGTTCTATGCCCCATGGTGTGGATACTGCCAGCAACTTGAGCCAAAGTACGAAGAAGCAGCTTCGGTATTGAGTAATCATGATCCTCCAGTTATTCTTGCTAAAATGGATACAACAATTCTAGAAAATGCTGAACTTGCAAGAAATTTCACCATTAATGGTGTTCCAAGCATTAAGATCTTCCGTAATGGTGGGAAGACGGTTCATGATTACAAAGGTACTCGTGAGACGGAAGGTATAATTGCTTATTTGAAAAAACATGGGGGCCCTGCATCTCTTGAAATCAAAACCGAGAAAGATGCTGCAACCTTTATTGATGAGAAAAAGATTGTTGTTGCTGGTATATTTCCACAACTCTCTTTAGAGAAGATCATCAATTTTACTACTTTAGCTGAAGATTTACGAGTAGATTACGATTTTGTTCACACACTTGATGCCAAACTCCTTCCTCGTGGTGGGCTGGTTGATAAGCCAACTATCCGTCTATTGAAGCCATATGATGAACTTTATGCTGATTTCGAGGATTTTCAAATTGAGGCAATGCAGAATTTCATTGAAGAAACTAGTGTCCCAATCATGGCTATTCTTGATGATAATCCAGAAAACCAACAATTTGTTAATCACTTTTTGCATAGTCCAGGAGACAAGGTATTTCTATTTCTGAACTTCAGCACTGATCTTGATGCTTTCAAGATTAAGTACTATGATCTTGCACTCAGTTACAAGGGAAAGGAAACAAACTTCCTCTTGGGAGATGCTGAGAGTGGTAAAAAGGCCCTTCAGTATTTTGGATTGGACACTGATCAGACACCTTTAATCTTCGTACTTACCATGGGTAGCACAAAATACGTTCAGCGACATGTACAACCCGATAACCTTGCATCTTGGTTGAAGGATTGTAAGGACGGAAAGTTGAAGCCATACTTGAAGTCACAGCCAATTCCAGAATTTAACAATGAAACTGTGAAGGTGGTGGTTGCAGAGACTCTTGAGGATATGGTGTTCAATTCGGGAAAAGATGTACTGTTGGAGTTCTATCGACTTGGGTGTAGATATTGTGAGGAGTTTGCTCCCGTCTTGGATGAAATAGCTATCTCATTTGAAAAAGATCCTCATGTCGTGATTGCTAAAATTGATGGAACGGAAAATGATATACCTCGTGACGTATTTGAAGTTGAAGGATTCCCAACTTTATACTTGAGATCTTCAACGGGTAGTTTGTCACGGTTTGAGGGTAATAAAACAAAAGAGGCCATTATTGAATTTATCCAGACAAACAGAAGTAGCCCTGCCTTTGATTTTAGCATATCACAAACACAAACAGATCAAGTGAAGGATGAGTTGTTTTCTTTTGCCAACTGATGGTTATGTTATATTTTCTTCTTTTCTTTCACCTTTCATACCAATAAGTTGCTTCTATCACACACTTGCGCCGCTTATTAATAAATTAGTTTGCATTACAGGTGAATTCAATATTATTCGATATAATTTTTATAAAATTAACAAAATATGTGATGAGTAACACAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g018700.2.1SL2.50ch05:22827654..22832782497-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g018700.2SL2.50ch05:22827490..228328165,327-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g018700.2.1.1SL2.50ch05:22832637..22832816180-1
exonexon:Solyc05g018700.2.1.10SL2.50ch05:22828394..22828602209-1
exonexon:Solyc05g018700.2.1.11SL2.50ch05:22827490..22827673184-n/a
exonexon:Solyc05g018700.2.1.2SL2.50ch05:22832262..2283229231-n/a
exonexon:Solyc05g018700.2.1.3SL2.50ch05:22831887..22832174288-n/a
exonexon:Solyc05g018700.2.1.4SL2.50ch05:22831621..22831806186-n/a
exonexon:Solyc05g018700.2.1.5SL2.50ch05:22831399..22831524126-n/a
exonexon:Solyc05g018700.2.1.6SL2.50ch05:22829388..22829522135-n/a
exonexon:Solyc05g018700.2.1.7SL2.50ch05:22829174..22829293120-n/a
exonexon:Solyc05g018700.2.1.8SL2.50ch05:22828907..22829024118-2
exonexon:Solyc05g018700.2.1.9SL2.50ch05:22828687..22828799113-n/a
intronintron:Solyc05g018700.2.1.10SL2.50ch05:22828603..22828686n/a-n/a
intronintron:Solyc05g018700.2.1.11SL2.50ch05:22827674..22828393n/a-n/a
intronintron:Solyc05g018700.2.1.2SL2.50ch05:22832293..22832636n/a-n/a
intronintron:Solyc05g018700.2.1.3SL2.50ch05:22832175..22832261n/a-n/a
intronintron:Solyc05g018700.2.1.4SL2.50ch05:22831807..22831886n/a-n/a
intronintron:Solyc05g018700.2.1.5SL2.50ch05:22831525..22831620n/a-n/a
intronintron:Solyc05g018700.2.1.6SL2.50ch05:22829523..22831398n/a-n/a
intronintron:Solyc05g018700.2.1.7SL2.50ch05:22829294..22829387n/a-n/a
intronintron:Solyc05g018700.2.1.8SL2.50ch05:22829025..22829173n/a-n/a
intronintron:Solyc05g018700.2.1.9SL2.50ch05:22828800..22828906n/a-n/a
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Related viewsNone found
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