Solanum lycopersicum mRNA Solyc05g015930.2.1

mRNA details  
Name
Solyc05g015930.2.1
Type
mRNA
Length
4,929
Organism
Solanum lycopersicum
Description
GYF domain-containing protein (AHRD V1 *-*- D7KBQ1_ARALY); contains Interpro domain(s) IPR003169 GYF
Location(s)
SL2.50ch05:13046102..13054405
GFF source
ITAG_eugene
From BOGAS
1
Length
8304
Nb exon
12
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g015930.2.1 GYF domain-containing protein (AHRD V1 *-*- D7KBQ1_ARALY); contains Interpro domain(s) IPR003169 GYF

ATGGCAGAAGGAAATCTTGATCTTCCTGACGATCTTCTTTCCTCTAAGACTTCTGATCACTCCAAAGGTAATGATGACAACAAGCCTTTCATGGGCCAGCTTGATATTTCCAAAGATCAACCAATGGTGGACAGCAGCATTCCTTTGTCTCCGCAGTGGCTTTATGTTAAACCAAGCGACACAAAGATGGAACCACGTCCACCAAGCTCTCTGTCACTTGGAAGTTCTGTTGATTCAAGTCAGAAGGACGCTTGGCGTACAGATGTACCTGAGGACAAGAAGGATTGGAGAAGAACGACAATGGAAACTGAGAGCAGTCGCCGGTGGCGTGAGGAAGAGAGGGAAACTGGCTTGCTTGGTCGGAGAGAACGAAGGAAAACCGATCGCCGTGCTGAGCATGACGTTAATAACCGTAATTCTGGGGTTGATACAAGGCGTGATAACAAGTGGTCTTCTAGGTGGGGTCCTGATGACAAGGAAAAAGAAAATCGCACTGAGAAAAGGATAGATGTAGATAAGGAAGATGTTCATAATGATGGCCAAACATTTGTGGCCAACCATACTGTCTCAGAACGGGAGTCAGATTCTCGTGACAAGTGGCGTCCACGCTATAAAATGGAGGGCAACTCTGCAGCTCCAAGTTCCTATCGAGCTGCTCCAGGTTTTGGACAGGAGAGAGGAAAAGTAGAAGGGTCAAATGTGGGATTTAACTTGGGTCGTGGGAGGTCTACTGGGACTATTATAAGAACTTCCTCTGGGGGTGCAATTGGGGCTTCACCATTTGAGAATTCTGTTCCTGGAAAATCAGGAATCTCGACTGGCATATTCAGTTATCCAAGGGGGAAAGCTCTTGACATATACCGCAGGCAAAAGCTTGGCTCATCTCTTTGTAGCATGCCTGAAAATATGGAAGAAGCTCCCCCAGTTACTCAAGTAATTGCTATTGAACCATTAGCTTTTGTTGTTCCTGATGCTGAGGAGGAGGCTGTTCTCAATGATATATGGAAGGGTAAAATTACTGGTGGTGGTGTTTCTAACAATTCCTTTAGAAAGGGTCAATCAATGGATAATGTCACAGAAACAGGGGATACAGAGCCCAACAATACGAAAATAGGTGCTCCCTCCGCTGATGTCACTGAAGAGACAGTTGATGGGTTGCTGAAAACATCAATACGTGTTGAAGCCTATAGCTTTGTTTACGAGAACGGTGTCAGGGTCAAGTTTGATGGAGGAGATAATCATGAAGGACAGAAAGACAATCATTCTGAAGCTATCGCCGCAGATGGAAGTTTGTTGACCAGGGAGAGAGCTGATAATAGTGACTGCTTCAAATACATTAGTGGGTCCCAATTTGATATTTCTATGCAGAGCTTACCAGATTCTGGAGCAACCAAGACACCTATCTTTGAGAACAATCAACATGTTGCTTTTGATGGCAGTTTAAAGGTGTCTGATGATTCAAATTCCGCATTTGTGAAGTCCTCTTCTGAAATCTATTGGAACAACCTTCTAGGAAGGGGTATTCCACCAGAGGAGTTGAGTTTGTACTATCGTGATCCTCAGGGCGAAATCCAGGGGCCATTTCTTGGAGCTGACATTATTTCATGGTTTGATCAGGGATTTTTTGGTATGGACTTGCTAGTTCGCTTGGAAGATGCCCCTGAAGATTCACCTTTCTTTGAACTTTGTGATGTAATGCCGCATTTGAAATTTGAACATGAGCATGTTGGTAACACCAATCTTTCCCAGGCAGAACCATCTGCTGTACTAGAGGGGAAGTTGGATCCTGATTTACGTAGCTCAGCTTCTGTTCCTGAGATGGTTGGATATTCTGCCTTTGATGGTTCGAGCTGGCCGCCATCTGATTTTGATGGCATTGGTGGACATCGTGTTCAGTCAATACCTGATCATCCAGCTCGTCAATTTAAACCTGCATATTTACATAGTGAAGACTTTAACAATTTTGTTGTTCAAGATGAAGAAATTGTGTTTCCGGGAAGACCTGGAAGTGGTGGCAATGCTATTGGAAAAACTTCCACAGGCCTTACTGATCCTTCAAAGATCCACCGTGCAACTCCAAGCGCAATATGTGAGGGTGGAGTTCCAGATCACGAAGGGACATTGCACCCACTTGGTTTATTATGGTCAGAGCTTGAAGGGACTGAAGGAAAGAATGGTCCTATCTTTGACGTTCCTTTTAGAGGAAGTGGGCAGGATCAAGTTCTAAACTCTGGTGCTGCAAGGGTTGGGCCATTTGGTGCCAAGACGGATTCAACCTCCGCTCTGGAGACGTGGACTGATGCTTATAGAAGAAATGCTGGATCTGAACTCAACATATATCATGATGCTATGGATGCCAGCCGCTTGTTGCACCAGGACCATGAATTGAACCGGTTTGAGTTGGCAGACAAGATGTTTCCCCAACAGCTTCAGCAACAGCGTCCTCATAATTTGATATCCTCTCATAATAGTCACTTAAATGAAGCTATGATGGAACGTGGCAAAAATCATAATTCAATACACCAACCACAGTTAGCGAGTCAGACTGGGCAGGATCTGGAACACTTCATGGCGCTTCAGCTGCAACAGCAGAGACAGTTGCTGCAGCTTCAACAACTGCAGCAACAGCAACAGTTCCATCAACAGCAAATGCTAATGAAAGAACAAGAGTCTCATGCTAGGCAGCTGGTTCTTGAACAATTATTGCAGAGACAAGTACATGATCCAAGTCACACACAATCACGTCTTGATGCTATTAGGCATAGCAGTGCTCTGGAGCAGGTGTTGATAGAGCAACAAATTCTGAGTGAACTGCAACAGCGTCCACATCTTCCACCAAGACATGCTGAACCATCTATTGAGCATCTCATTCAAGCAAAGTTTGGTCAAATACCACATCAAGGGCCTCAAAATGATTTAATGGAGCTCCTATCACGGGCAAAACATGGACAATTGCACCCTTTGGAGCATCAAGCCCTTCAACAAGAACAAGCACATGAGAGGTTAAGACAGCGATTGGAAATGGAGGAAGACAGACAGATTGGTGCTGTCTGGCCTGCTGATGAAACTGGTCAGTATCTAAGAAATTCAGGTGTTGCTCGTCGAGCAAACTCTGGATTTGGTTCATTAGATATTTATCAACAGCAACAGATGCCCCCTGCAGAAGAGCATGTTAGTCATCTGCAAAGGAATTTGTCAATGCAGGATAGAATTCAGCGGGGTCTCTATGACACTGGATTTCTGCCTTTGGAACGGACGATGTCAGTACCTGGTGGTGGTCCTGGTGTTAATTTGGATGCCATAAATCCTCTAGTGCGCGCACAAGGTTTAGAAATGCAAGATCCAAATTCAAGAATGCACTCAGCTGGTCATATGCCTGGTTTCTCGTCTGGCATCCACTTGCAATCTCCTCACCGTCCTCTATTTTCAAGTCAATTTCATGCTCCAAATGTAGATACAATTGAAAATCATTGGTCCGAAAGAAATGGTCAGTTACCAGCTGATTGGATGGAAACTAGGCTGCAGCAACTACATCTCAATGGTGAGAGGCATAGAAGGGATTTTGATGTCAAGAGGGCTTCTGAAGATCAAAGTATGTGGATGTCAGCTGGTGCTAATGATGACAGTTCAAAGCGATTACTTATGGAACTGCTCCAGCAAAAATCTGGTCAGCAGTCAACTGAGCAAGCAGAAATTACCAGAGGGATTTTGTTTGAGAGGGGCTTTCAGTCTGGTCACTTTTCTACGACAAATGCTTCAAACCGTTCATTCAACCCTCTTTTGGACCAGGATACAAGTCTAAACCAAGCTTTCTCTGTTGGGTCATATGGTTCTAATTCAGGTTTTCCACCACAGAGAGATCATGTAAATGAGATTGCCGGTAGTCTTGATGCTTGTGAGAGATTGCCCTTCCAATCTCATTCTGGAGCTTTTGCTGAACCTGAACCTGTCTTTTCCAGCATCAATGACGCCTCTCAGGTACATTTGGAGGCTCGCGAAAGTATCGTTAGGCAAGCTGGTGTGGCGACTGTAGAAGGGGAAATGCCAATTAACTTGCTCAGCAGGCACACTTCACTTGGGACTGGAGGTGGAAGTCTCGACTCCTACAATGACAAGAATGATAGAAGGGATTCAGCTGCGGAGGAAATTCCTAAGGAACGGGTGGTTGTGACATCAAAAAGGTCGGATAACATCTTGCCGAAGTACCCACCTGTATTGCGCGTTTCTTCTACCCAGGAGGGTCTATCGGAGATAGCTTCTGATGGCCTTGTGAGAGGCAAAAATTCTTCAGATGCCATGGCTTCTGAAGGGGGTAGGAGGGAAGTGGGAGGTAATGCAGCAAATCAAGTTCCCAGTGCTATGACGTCTGAAAAGAAAGATGGGCGTTTTCGACGAACTGCATCTTGTAGTGATGCTGATGTCTCAGAGACATCATTCAGTGATATGCTTAAGAGTAATGTTAAGAAGGCAACAGCTCAGGAGGCACATGCATCAGAGGCATTGGATGCAACACAGTATGCCCGTAGTGGTAAGAAGAAAGGAAAGAAAGGAAGACAAATTGATCCTGCTCTTCTTGGTTTCAAGGTTACAAGCAATCGCATCATGATGGGTGAGATACAACGGATAGAAGATTAGTGCTGTACAGTTGTAACTTGTGTCCCAATGACGATTCTTATGCTGTACATTTTCGTGTCATCTGTAAAATTTCCATACCACATTTTCTTTTACTCCATCCTATTTTGTGTAGGGGTGGCTTTTAGATATGGTTAGGTTAGTGTTAGTTAGTGTAGACAATTAGTTGTGTGGATTGAATCTTTATAGATAAAAAAACCCCAATCAGGTAGAGTAGAGGAACACCCTAACAGAATGTTTTCCTTTAGCCAATGAGATAAGGGCAAAAGAATATACCAGTAAGTTCTGAAGGAGTAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g015930.2.1SL2.50ch05:13046101..130541111,545+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g015930.2SL2.50ch05:13046102..130544058,304+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g015930.2.1.1SL2.50ch05:13046102..1304616867+n/a
exonexon:Solyc05g015930.2.1.10SL2.50ch05:13052351..1305242373+2
exonexon:Solyc05g015930.2.1.11SL2.50ch05:13053190..13053338149+1
exonexon:Solyc05g015930.2.1.12SL2.50ch05:13053786..13054405620+2
exonexon:Solyc05g015930.2.1.2SL2.50ch05:13046424..1304647148+2
exonexon:Solyc05g015930.2.1.3SL2.50ch05:13046565..1304663874+2
exonexon:Solyc05g015930.2.1.4SL2.50ch05:13047724..13048518795+n/a
exonexon:Solyc05g015930.2.1.5SL2.50ch05:13048617..1304871094+n/a
exonexon:Solyc05g015930.2.1.6SL2.50ch05:13048830..13048979150+2
exonexon:Solyc05g015930.2.1.7SL2.50ch05:13049073..13049825753+2
exonexon:Solyc05g015930.2.1.8SL2.50ch05:13049992..130519881,997+2
exonexon:Solyc05g015930.2.1.9SL2.50ch05:13052072..13052180109+n/a
intronintron:Solyc05g015930.2.1.1SL2.50ch05:13046169..13046423n/a+n/a
intronintron:Solyc05g015930.2.1.10SL2.50ch05:13052424..13053189n/a+n/a
intronintron:Solyc05g015930.2.1.11SL2.50ch05:13053339..13053785n/a+n/a
intronintron:Solyc05g015930.2.1.2SL2.50ch05:13046472..13046564n/a+n/a
intronintron:Solyc05g015930.2.1.3SL2.50ch05:13046639..13047723n/a+n/a
intronintron:Solyc05g015930.2.1.4SL2.50ch05:13048519..13048616n/a+n/a
intronintron:Solyc05g015930.2.1.5SL2.50ch05:13048711..13048829n/a+n/a
intronintron:Solyc05g015930.2.1.6SL2.50ch05:13048980..13049072n/a+n/a
intronintron:Solyc05g015930.2.1.7SL2.50ch05:13049826..13049991n/a+n/a
intronintron:Solyc05g015930.2.1.8SL2.50ch05:13051989..13052071n/a+n/a
intronintron:Solyc05g015930.2.1.9SL2.50ch05:13052181..13052350n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17822396%2Fdetails feature 17822396
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