Solanum lycopersicum mRNA Solyc05g015920.2.1

mRNA details  
Name
Solyc05g015920.2.1
Type
mRNA
Length
5,124
Organism
Solanum lycopersicum
Description
GYF domain-containing protein (AHRD V1 ***- D7KBQ1_ARALY); contains Interpro domain(s) IPR003169 GYF
Location(s)
SL2.50ch05:12975786..12984207
GFF source
ITAG_eugene
From BOGAS
1
Length
8422
Nb exon
12
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g015920.2.1 GYF domain-containing protein (AHRD V1 ***- D7KBQ1_ARALY); contains Interpro domain(s) IPR003169 GYF

GGCTCTAGTGACCACCCAAACCCTCAGCCTTTTCTTCTCCGTCACCTGTTCCCGACTCGCGCATCTCTCTGCAACAGTTGTCATCTCGGAACCCTAAAACTCTCTCTGGTTTGTGCTTCGGTCTTCAAATCCACATTCACTCTCATCTGACTCTTCCATTTCACTCTCCCCCTTTTTCTCCGGTTCATTTTTCTGTATCGATCCTCTTTCTCGACAAGGCCATGGCAGAAGGAAATCTTGATCTTCCTGACGATCTTCTTTCCTCTAAGACTTCTGATCACTCCAAAGGTAATGATGACAACAAGCTTTTCATGGGCCAGCTTGATATTTCCAAAGATCAATCAATGGTGGACAGCAGCATTCCTTTGTCTCCGCAGTGGCTTTATGTTAAACCAAGCGACACAAAGATGGAACCACGTCCACCAAGCTCTCTGTCACTTGGAAGTTCTGTTGATTCAAGTCAGAAGGACGCTTGGCGTACAGATGTACCTGAGGACAAGAAGGATTGGAGAAAAAAGACAATGGAAACTGAGAGCAGTCGCCGGTGGCGTGAGGAAGAGAGGGAAACTGGCTTGCTTGGTCGGAGAGAACGAAGGAAAACCGATCGCCGTGCTGAGCATGATGTTAATAACCGTAATTCTGGGGTTGATACAAGGCGTGATAACAAGTGGTCTTCTAGGTGGGGTCCTGATGACAAGGAAAAAGAAAATCGCACTGAGAAAAGGATAGATGTAGATAAGGAAGATGTTCATAATGATGGCCAAACATTTGTGGCCAACCGTACTGTCTCAGAACGGGAGTCAGATTCTCGTGACAAGTGGCGTCCACGCTATAAAATGGAGGGCAACTCTGCAGCTCCAAGTTCCTATCGAGCTGCTCCAGGTTTTGGACAGGAGAGAGGAAAAGTAGAAGGGTCAAATGTGGGATTTAACTTGGGTCGTGGGAGGTCTACTGGGACTATTAGAAGACCTTCCTCTGGGGGTGCAATTGGTGCTTCACCATTTGAAAATTCTGTTCCTGGAAAATCAGGAATCTCGACTGGCATATTCAGTTATCCAAGGGGGAAAGCTCTTGACATATACCGCAGGCAAAAGCTTGGCTCATCTCTTTGTAGCATGCCTGAAAATATGGAAGAAGCTCCCCCAGTTACTCAAGTAATTGCTATTGAACCATTAGCTTTTGTTGTTCCTGATGCTGAGGAGGAGGCTGTTCTCAATGATATATGGAAGGGTAAAATTACTGGTGGTGGTGTTTCTAACAATTCCTTTAGAAAGGGTCAATCAATGGATAATGTCACAGGGGATACAGAGCCCAACTATACAAAAATAGGTGCTCCCTCTGCTGATGTCACTGAAGAGACAGTTGATGGGTTGCTGAAAACATCAATACGTGTTGAAGAAGCCAATACCTATAGCTTTGTTTACGAGAACGGTGTCAGGGTCAAGTTTGATGGAGGAGATAGTCATGAAGGACAGAAAGACAATCATTCTGAAGCTATCGCCGCAGATGGAAGTTTGTTGACCAGGAAGAGAGCTGATAATAGTGACTGCTTCAAATACATTAGTGGGTCCCAATTTGATATTTCTATGCAGAGGTTACCAGATTCTGGAGCAACCAAGACACCTATCTTTGAGAACAATCAACATGTTGCTTTTGATGGCAGTTTAAAGGTGTCTGATGATTCAAATTCTGCATTTGTGAAGTCCTCTTCTGAAATCTATTGGAACAACCTTCTAGGAAGGGGTATTCCACCAGAGGAGTTGAGTTTGTACTATCGTGATCCTCAGGGCGAAATCCAGGGGCCATTTCTCGGAGCTGACATCATATCATGGTATGATCAGGGATTTTTTGGTATGGACTTACTAGTTCGCTTGGAAGATGCCCCTGAAGATTCACCTTTCTTTGAACTTGGTGATGTAATGCCGCATTTGAAATTTGAACATGAACATTTTGGTAACACCAATCTTCCCCAGGCAGAACCATCTGCTGTACTAGAGGGTAAGTTGGATTCTGGTTTACGTAGCTCAGCTTCTGTTTCTGAGATGGTTGGTTCTGCTGCCTTTGATGGCTCCTGCTGGCAGCCATCTGATTTTGATGGCCTTGGTGGGCATCATATTCAGTCAGTACCTGATCATCCAGCTCGTCAATTTAAACCTCCATATTCACAAAATGAAGAGTGTAATGATTTTGGTGCTCAAGATGAAGAAATTGTGTTTCCAGGAAGACCTGGAAGCAGCGGTAGTCCTATTGGAAAAACTTCTACTGGTCTTACTGATCCTTCAAATATCCACCGTGCAACTCCAAGCGCGACATGTGATGGTGGAGTTCCAAATAATGAAGAGACATTGCATCCACTTGGTTTATTATGGTCAGAGCTTGAAGGCACTACCGGAAAGAGTGGTCCTATCTCAGATGTTCCTTTTAGAGGAACTGGCCAGGATCAAGTTCTAAACCCTGGTGCTGGAAGGGTTGGGCCATTTGGTGCCAAGATGGACTCAACCTCTGCTGCGGAGACATGGACTGATGCTTATAGAAGAAATGCTGGATCGGAACCCAACTTATATCAAGATGCTATGGATGCCAGCCGCTTATTGCACCAGGACCATGAAATGAGCCGGTTTGAGTTAGCAGAGAAGATGTTTTCCCAACAACTTCAGCAGCAGCATCCTCATAATTTGATGTCCCATCATAATAGTAACTTAAATGAAGCTTTGATGGAACGTGGAGCAAATCATAATTTAATGCACCAACCACAGTTGGCGAGTCAGGCTGGGCAGGATCTAGAACACTTTATGGTGCTTCAGCTGCAACAGCAGAGACAGTTACAGCTTCAACAGCTGCAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGCAACAGTTCCATCAACAGCAAATGCTTATGAAAGAACAACAGTCCCATGTTAGGCAGCTGGCTCTTGAACAATTATTGCAGAGTCAAGTACGGGATCAAAGTCACACACAATCACGTCTTGATGCTATTAGGCATAATAGTGCTCAGGAACAGGTGTTGATAAAGCAACAAATTCTTAGTGATCTGCAACAGCGTCCACATCTTCCTCCAAGACATGCTGAATCATCTATTGAGCATCTCATTCAAGCAAAGTTTGGTCAAATGCCACATCAAGGGCCTCAAAATGATTTATTGGAGCTCTTATCACGGGCAAAACATGGACAGTTGCACCCTTTAGAGCAACAAGTCCGTCAACAAGAACAAGCTCATGAGAGGTTAAGACAACGTTTGGAAATGGAGGAAGATAGACAGATCGGTGCTGTATGGCCTGTTGATGAAACTGCTCAGTATCTAAGAAATCCAGGTGTTGCTCGTCGAGCAAATTCCGGATTTGGTCCATTAGATATTTACCAACAGCAACAGATACCCCCTCCTGAAGAGCATGTTAGTGTTCTGGAAAGGAATTTGTCAATGCAGGATAGACTGCAGCGGGGTCTCTATGACACTGGATTTATGCCCTTGGAACGGACAATGTCAGTACCTGGTGGTGGTCCTGGTGTTAATTTGGATGCCGTAAATCCTCTAGTACATGCACCAGGTCTAGAAATGCAAGATCCAAATTCAAGAATGCACTCAGCTGGTCATATGCCTGCTTTCTCGACTGGCATCCACTTGCAATCTTCTCACCGTCCTCCGTTTCAATTTCATGCTCCAAATGTTGATACAATTGAAAATTATTGGTCCGAAAGAAATGGTCAGTTACCAGCTGATTGGATGGATACTAGGATGCAGCAACTACATCTTAAAGGTGAGAGGCAAAGAAGAGATTTTGATGTCAAAAGAGCTTCTGAAGATCAAAGTATGTGGATGTCAGCTGGTGCTAATGATGACAGTTCAAAGCGATTACTTATGGAACTGCTCCAGCAAAAGTCTGGCCAGCAGTCAACTGAGCAAGCAGAAATGACCAGAGGGATTTTGTTTGAGAGGGGCTTACACTCTGGTCACTTTTCTGTGACAAATGCTTCAAACCGTTCGTTCAACCCTCTTTTGGACCAGGATACGAGTCTAAACCAAGCTTTTACTGTTGGGTCATATGGTTCTAATTCAGATTTGCCACCACAGAGAGATCATGTAAATGAGATTGCTGATAGCCTTGATGCTTGTGAGAGATTGCCCTTCAAATCTCATTCTGGAGCTTTAGCCGAAGCTCAACCCGTCTTTTCCAGCATCAATGATGCCTCTAAGGTACATTTAGAGGCTCGCGAAAGTATTGTTAGGCAAGCTGGTTTGACGACTGTAGAAGGGGAAATGCCAACTAATTTGCTTAGCAGGCACACTCCACTCGGGACTGGAGATTGTAGTGTTTTCAAATCATCTTCACGTGGAAGTCTAGACTTCTACAATGACAAGAGTGATAGAGGGGATTCGGCTATAGAGGAAATTCCCAAGGAACGAATGGCTGTGACATCAAAAAGGACAGATAACATCTTGCCGAAGCGTCCACCTGTCTCGCGCATTTCTTCAACCCAGGAGGGTTTATCGGAGATAAATTCTGATAGCCTAGTGAGAGGCAAAAATCCTTCAGATGGCATGGCTTCTGAAGGGGGTAGGAAGGAAGCGGGAGGTAATGCTGCAAATCAAGTTCTTGGTTCTGCGACATCTGTAAATAAAGACGGGCGGTTTCGTCGAACTGCATCTTGTAGTGACGCTGATGTTTCAGAGACATCATTCAGTGATATGCTTAAGAGTAATGTTAAGAAGGCAACAGCTCAGGAGGCACATGCATCAGAGGCAATGGATGCAACACAGTATGCCCGTAGTGGTAAGAAGAAAGGAAAGAAAGGAAGACAAATTGATCCTGCTCTTCTTGGTTTCAAGGTTACAAGCAATCGCATCATGATGGGTGAGATACAACGGATAGAAGATTAGTTGCTGTACAGTTGTAACTTATGTCCCATGACATATTCTTGTGCTGTACATTTTCTAGTCGTGTGTAAAATTTCTGTAACACACTTACTGTTATCCCATCCCATTTTGTGTAGGGATGGATGGCTGTTGAGATGTAGTTAGTGTAGCCAATTAGTTGAGTTAACTTGTGTCGATTTAATCAAGTAGAGCAGAGTAATATCCTTACATAATATACCAA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g015920.2.1SL2.50ch05:12976002..129839861,562-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g015920.2SL2.50ch05:12975786..129842078,422-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g015920.2.1.1SL2.50ch05:12983920..12984207288-2
exonexon:Solyc05g015920.2.1.10SL2.50ch05:12977702..12977801100-1
exonexon:Solyc05g015920.2.1.11SL2.50ch05:12976668..12976816149-2
exonexon:Solyc05g015920.2.1.12SL2.50ch05:12975786..12976328543-n/a
exonexon:Solyc05g015920.2.1.2SL2.50ch05:12983617..1298366448-2
exonexon:Solyc05g015920.2.1.3SL2.50ch05:12983452..1298352574-n/a
exonexon:Solyc05g015920.2.1.4SL2.50ch05:12981653..12982447795-n/a
exonexon:Solyc05g015920.2.1.5SL2.50ch05:12981461..1298155494-2
exonexon:Solyc05g015920.2.1.6SL2.50ch05:12981183..12981335153-2
exonexon:Solyc05g015920.2.1.7SL2.50ch05:12980337..12981089753-2
exonexon:Solyc05g015920.2.1.8SL2.50ch05:12978125..129801422,018-n/a
exonexon:Solyc05g015920.2.1.9SL2.50ch05:12977933..12978041109-2
intronintron:Solyc05g015920.2.1.10SL2.50ch05:12977802..12977932n/a-n/a
intronintron:Solyc05g015920.2.1.11SL2.50ch05:12976817..12977701n/a-n/a
intronintron:Solyc05g015920.2.1.12SL2.50ch05:12976329..12976667n/a-n/a
intronintron:Solyc05g015920.2.1.2SL2.50ch05:12983665..12983919n/a-n/a
intronintron:Solyc05g015920.2.1.3SL2.50ch05:12983526..12983616n/a-n/a
intronintron:Solyc05g015920.2.1.4SL2.50ch05:12982448..12983451n/a-n/a
intronintron:Solyc05g015920.2.1.5SL2.50ch05:12981555..12981652n/a-n/a
intronintron:Solyc05g015920.2.1.6SL2.50ch05:12981336..12981460n/a-n/a
intronintron:Solyc05g015920.2.1.7SL2.50ch05:12981090..12981182n/a-n/a
intronintron:Solyc05g015920.2.1.8SL2.50ch05:12980143..12980336n/a-n/a
intronintron:Solyc05g015920.2.1.9SL2.50ch05:12978042..12978124n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17822371%2Fdetails feature 17822371
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