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Solanum lycopersicum mRNA Solyc05g012070.2.1

mRNA details  
Name
Solyc05g012070.2.1
Type
mRNA
Length
2,197
Organism
Solanum lycopersicum
Description
Alpha-1 4-glucan-protein synthase (AHRD V1 **-* B9RLK7_RICCO); contains Interpro domain(s) IPR004901 Alpha-1,4-glucan-protein synthase, UDP-forming
Location(s)
SL2.50ch05:5295089..5298245
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0030054
Length
3157
Nb exon
4
Sifter term
GO:0016760
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g012070.2.1 Alpha-1 4-glucan-protein synthase (AHRD V1 **-* B9RLK7_RICCO); contains Interpro domain(s) IPR004901 Alpha-1,4-glucan-protein synthase, UDP-forming

AATACTCAATAGGATTCACTTTGTAAATCCTTAATTGTAAATTGTTTTTTTCTAAAACTAATACTAACAAATTCTGTCTTTATTTAAGATTCATAGGATTCATTTAATTACACAGATTGTAAGTAACTTGCTATTCTTAATTTAAAATATAAACAAATAGTTCTGACTTCCAAAAATAAAATTTAATTACATAAAATTCATATTAATTTAATTTTAAAATAAGTATTGCGAAAAAACAAAAGAAAAAGAAAGATGGAGCAAGACCTAATCTGAAAGCATGAATCAAGAAGTCAATAGAATTTATTCTCACCAAATTTATTTATTATTTTTCTAATAACTAATACTAAGTTACTAACAAAACTTGTCTTTATTTAGATTATTAATTAAAGATTAACATTTAATGCACTTACCATAAATCTATATTGAATGAGACTATTCAATTTTTAACGAAAGATCTCATATTTGAGTGATCAAATTTCAATACAATATCATTAACTAACGTAGTATAGTGATAAGACTATTTATTTTTATCCTAGTGAAAATTCTTGAATTCGAATAGTTAAACTTTAATAGAATTTGAATAGTTAAACTTTAATATAGATACTAAATACCATTAAAAAAATATATATATTTTAATGTGTTCTAATATTACCTTTCCATGTTTTAAAACAAATACATGTACATACCAAAGTGTGATTCAAGTAATATTTTAGTCAACACAAATAACTTCAAAAAAAAAAAAACTACTCTTTCTTCTTGTATAGTAAGTAGTATAAATAGGATACAACCCTTCACTTCTCTTTACTCAAAAGAAAAAAGAAAAAATCAAAATCTTGAAAATTCATAGAGAATTAGCTATGGCAGCAGCAACACCACTGTTGAAAGATGAGCTTGATATTGTGATTCCCACAATAAGAAATCTTGATTTTTTGGAGATGTGGAGACCCTTTTTTCAGCCATACCATCTGATTATTGTTCAAGATGGTGATCCTTCAAAGACCATTAAGGTCCCTGAAGGATTTGATTATGAGCTTTATAATCGTAATGACATTAACAGGATTTTGGGTCCTAAAGCATCTTGTATCTCTTTTAAGGATTCTGCTTGTAGGTGTTTTGGGTATATGGTGTCTAAGAAGAAGTATATCTACACCATTGATGATGATTGCTTTGTGGCCAAGGACCCGTCTGGTAAGGATATCAATGCACTTGAGCAGCACATCAAGAACCTCCTGTGCCCATCTACTCCGCACTTCTTCAACACTCTGTATGATCCATACAGAGATGGTGCAGATTTCGTCCGTGGCTACCCTTTCAGCATGCGTGAGGGTGCTCCAACAGCTGTTTCTCATGGATTGTGGCTCAACATCCCTGACTACGATGCTCCCACGCAGCTTGTTAAGCCTCATGAGAGGAACACTAGATACGTTGACGCTGTCATGACGATTCCAAAGGGCACTTTGTTCCCTATGTGTGGAATGAACTTGGCCTTTGACCGTGATCTCATTGGACCTGCAATGTACTTTGGTCTCATGGGTGACGGTCAGCCAATTGGTCGTTACGACGATATGTGGGCCGGCTGGTGTACCAAGGTCATATGTGACCATTTGGGACTAGGAATCAAGACTGGTCTGCCCTACATATGGCACAGCAAAGCTAGCAACCCATTCGTTAACCTCAAAAAGGAGTACAACGGTATCTTCTGGCAAGAGGAGATCATCCCCTTCTTCCAGACTGCAACGCTTCCTAAAGAGTGTACAACCGTCCAGCAATGCTACCTTGAGCTCTCAAAGCAGGTTAAGGAAAAACTTTCCAAGATCGATCCCTATTTCACCAAGCTAGGAGATGCTATGGTCACGTGGATCGAAGCTTGGGATGAGCTTAACCCTACTGGGGACAACTTGGCTAAGCTGTCCATCGCCGATGGTCCAGCAAAGACTAAAAAGTAGATGGCTTTTTTGCTCATTTTCTTCGACGACTAAGACACTTATGAGTTAACTAGAACTGGATTTTACTTGTTTTAATTTTAGTTGAGGATTTAGGTTTCATATTGCTGTTATGTGGAGCAGCTTTTGATTGCCTTCTCTGAGACATGATAGGAGTATTTTTATTTTTATTTTTTTATTTATATAAGGCTTAGTTCCAAACTTTGAGATTTATCTTTTTATATCAATAAATTATGGTTTAGTGCTTTATGCTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g012070.2.1SL2.50ch05:5295339..5297388363-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g012070.2SL2.50ch05:5295089..52982453,157-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g012070.2.1.1SL2.50ch05:5297077..52982451,169-n/a
exonexon:Solyc05g012070.2.1.2SL2.50ch05:5296048..5296298251-1
exonexon:Solyc05g012070.2.1.3SL2.50ch05:5295793..5295961169-n/a
exonexon:Solyc05g012070.2.1.4SL2.50ch05:5295089..5295696608-n/a
intronintron:Solyc05g012070.2.1.2SL2.50ch05:5296299..5297076n/a-n/a
intronintron:Solyc05g012070.2.1.3SL2.50ch05:5295962..5296047n/a-n/a
intronintron:Solyc05g012070.2.1.4SL2.50ch05:5295697..5295792n/a-n/a
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