Solanum lycopersicum mRNA Solyc05g009700.2.1

mRNA details  
Name
Solyc05g009700.2.1
Type
mRNA
Length
1,634
Organism
Solanum lycopersicum
Description
Histidine amino acid transporter (AHRD V1 **** Q85V22_ORYSI); contains Interpro domain(s) IPR013057 Amino acid transporter, transmembrane
Location(s)
SL2.50ch05:3896183..3899785
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
3603
Nb exon
8
Sifter term
GO:0015171
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g009700.2.1 Histidine amino acid transporter (AHRD V1 **** Q85V22_ORYSI); contains Interpro domain(s) IPR013057 Amino acid transporter, transmembrane

GGAAAAGCAGCGAGTAAAAGTGACTTCTTTAACCTTTATATATTCCACTCAAGTATCAGTAACAAGAAGTAGTACAAATACATGCTCTTGTTTGCTCAAACAAACTAACACATTCTTTGTCTCTTTTTCTTATTTCATTTGCAAACATGGTTTCATCTTCTGCTCCAAAGGAAGTTCCTTCAGATGAGAAATGGGCAGAAGATGGTCCCCCTCGCGAAGCGAAATGGTGGTATTCGACGTTTCATACTGTCACTGCTATGGTTGGTGCTGGTGTTCTTAGCCTACCTTATGCCATGGCCTACTTAGGATGGGGTCCAGGGACAGTAGTGATGATCTTATCATGGTGTATAACTTTGAACACAATGTGGCAAATGATACAACTCCATGAATGTGTCCCCGGGGTTCGTTTTGATCGATACAAGGACCTTGGAAAACATGTTTTTGGACCAAAACTTGGGGCATGGATTGTGCTTCCACAACAACTAATAGTTCAGGTTGGTTGTGACATAGTGTACATGGTTACTGGAGGAAAATGTTTGAAGAAATTCATGGAGATTGCTTGTACTAATTGCACTCGAATTCGACAATCTTATTGGATTTGCATCTTTGGTGCCATTCATTTCTTCCTTTCACAATTGCCAAATTTCAATGCTGTTTCTGGTGTTTCATTAGCTGCTGCAATCATGTCACTAAGCTATTCAACTATAGCATGGGTTGGTTGTGTGGGCAAAGGCAGAGTCCCTAACATGAGCTACGCGTACAAGACAACAAGTTCAGTGGACTACATGTTCCGCGTCTTCAATGCATTAGGCCAAGTATCGTTTGCCTATGCAGGGCACGCGGTGGTCCTTGAGATTCAGGCTACAATTCCATCAACACCTGAAAAGCCTTCCAAAGTACCAATGTGGAAAGGTGCTGTATGGGCTTATTTTGTCAATGCTCTGTGTTATTTCCCTGTTGCATTCATCGGGTACTGGGCGTTTGGACAAGATGTCGATGACAACGTACTCGTGGGACTTGAAAGGCCATCTTGGCTTATTGCAGCTGCTAACTTAATGGTGGTTGTCCATGTCATAGGCAGTTATCAGGTTTATGCTATGCCAGTATTTGATCTGATGGAGCAAAAATTGGTGAAAACATGGAATTTCCCACCTGGAGTATTGCTGAGATTCATTGTTCGTACTACATACGTTGCTTTCACTTTGTTTCTTGGTGTAACATTCCCTTTCTTTGGTGATCTTCTTGGTTTCTTTGGAGGATTTGGTTTTGCTCCTACTTCTTACTTTCTCCCAAGCATAATGTGGCTTAAGGTCAAGAAACCAAGAAGATTCAGTACCTCATGGTGGATAAATTGGGCATGTATATTTATTGGAGTATTTATTATGATAGCTTCCACAGTTGGTGGATTGAGAAATATTGTTGCTGATTCATCCTCATATGAGTTCTATTCATGAAGGATACATTTATAATTTAATTTACATAAAATCTATTATTGGATGAAATCTAATTCAGAAAAAATTTAGTTAAAATTTAAATATGTAGTGATCTTGATTAAATATGAAATGTTTTATGTATCAAGCTAGCTGCTTTTTTAGCAGTAGTTTGTTAAGATTTCTAATTTTAGCAAATTTCCT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g009700.2.1SL2.50ch05:3896362..3899639436-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g009700.2SL2.50ch05:3896183..38997853,603-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g009700.2.1.1SL2.50ch05:3899616..3899785170-n/a
exonexon:Solyc05g009700.2.1.2SL2.50ch05:3899363..3899502140-1
exonexon:Solyc05g009700.2.1.3SL2.50ch05:3898645..3899028384-1
exonexon:Solyc05g009700.2.1.4SL2.50ch05:3897778..3898171394-n/a
exonexon:Solyc05g009700.2.1.5SL2.50ch05:3897589..3897694106-2
exonexon:Solyc05g009700.2.1.6SL2.50ch05:3897170..389726192-n/a
exonexon:Solyc05g009700.2.1.7SL2.50ch05:3896916..389698469-n/a
exonexon:Solyc05g009700.2.1.8SL2.50ch05:3896183..3896461279-n/a
intronintron:Solyc05g009700.2.1.2SL2.50ch05:3899503..3899615n/a-n/a
intronintron:Solyc05g009700.2.1.3SL2.50ch05:3899029..3899362n/a-n/a
intronintron:Solyc05g009700.2.1.4SL2.50ch05:3898172..3898644n/a-n/a
intronintron:Solyc05g009700.2.1.5SL2.50ch05:3897695..3897777n/a-n/a
intronintron:Solyc05g009700.2.1.6SL2.50ch05:3897262..3897588n/a-n/a
intronintron:Solyc05g009700.2.1.7SL2.50ch05:3896985..3897169n/a-n/a
intronintron:Solyc05g009700.2.1.8SL2.50ch05:3896462..3896915n/a-n/a
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Related viewsNone found
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