Sol Genomics Network

Solanum lycopersicum gene Solyc05g008600.2

Name Solyc05g008600.2	Type Gene	Organism Solanum lycopersicum
Synonyms / aliases Solyc05g008600	Length 3,327

Description

Fructose-bisphosphate aldolase (AHRD V1 ***- B9SJY9_RICCO); contains Interpro domain(s) IPR000741 Fructose-bisphosphate aldolase, class-I

Location(s)

SL2.50ch05:2916906..2920232

GFF source

ITAG_eugene

From BOGAS: 1

Length: 3327

Genome Viewer

Related features

Features that are parts of this gene

Type	Name	Location	Length	Strand	Phase
mRNA	Solyc05g008600.2.1	SL2.50ch05:2916906..2920232	1,623	-	n/a

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Genomic sequence

unprocessed genomic sequence region underlying this gene

>Solyc05g008600.2 SL2.50ch05:2920232..2916906 (sequence from reverse strand)
TAAGCACACACACTGTTAGCCGTCGCTACCAACCCACCAAACTTTCATTTTCTATATATTGTTTCAACAGCGACGTTTTATACTCAAAAAGCTCAATTTCTTTTGTAGAGAGAGAGAAAAAAGAGGCGATTTTCAGGAGAAAAAAATGGCGAGTTCTAGTTTGGTGAAGCTCAACGCATCGTCATCTTCATGGATCGGTCAACAATCGTTCAATCAACGGTCTGGATCTTCCTGCCGGTTGCCTGTTTCGAATCGCCGTGTTTCAGTCATCCGTGCTGCTGGATCTTACACCGATGAGCTCATCAAAACCGCTGTAACACTCTCTCTCTCTCTGTTTATCTATATATGTATATATGTATGTGTGTTTGCGTTTCTCACTTTTATGTGTTTGCATGGTTTATGATCGGATCTATAAGTTTTCTTTTCCGGTGTAACTTGATTTGTTTTATATTTTTCGTTTGGATAATGTATTTTTTGTATTGAATTCCGCTGTAATACTGGAATTTTTTGCAACTGCGCTGCCTTGGTTCGTTGGATTGGTTGAAATTGGAAAGGTTTAGTTTGGTCAACTTTTTGTTTATTTAGATTTTTATGCTGATGTTGATATGTTTGGCTGTAGTATCAGTTGGATCTAGTAGCTTCTTTTTAGTTTAGATCATGCATTTTAAGTTGAATTTTTGGTTAGAAAATGTGTGCTAATTTACTGAATTTTGAAAGTTTGCTGCTGTTGGTTCAGTAGGTTGATGGAAGTTTAAGAGGTTTGCTTTTTGGTCAGAATTGTTGTGTTGGTATTGTTTATAGTGATGCTGATAAAGTTGGCTGTAGTTATAAACAGCTAAAACAGCTACATGGTTCATTCTAATTTTACAACAACTACAACATGTTAACATACCAGTGTAGTCCTGCAAGTGGGGCATGGGGAGGGTAGTGTGTACAGTGACCTTACCCCCTAATTTAAGAAGGACTTCAAAATCTTAAATTTAGGTTGATGACTTGAAAATTTGTTTCCCAGAGCTACATGAAAGTGATATCTCTCCCAGGCACACACACTTCATTTGTTTGCATGTTTTCTGATTGGATTTAATATCTTGGATTCGCTGGATTAGGAAAATGTTTAGTTGGTAAACTTTGTTTTTATATGTTGATGTTGATATGTTCAGCTGTATCTATAAATTGGTTCTCTTGCATGAAGTAACAACTACATTGTATCCACCCGCTTATAACTCACCTTTGCTTAACATTCTTGTAAACTTGGAGAATGCAGGGTAAAAGATGTTCTGCAAAATGTAATAATGCTGAACATTTGTCTATTGCTTACTTGATGTAGAAAACTATTGCTTCTCCTGGAAGGGGCATCCTTGCCATTGATGAATCGAATGCAACTGCCGGAAAGAGACTGGCGTCAATTGGTCTGGACAACACAGAAGCAAACAGACAAGCTTACCGTCAACTCTTGTTGACCACTCCTGGCCTAGGTGATTACATCTCTGGATCCATTCTATTCGAAGAGACACTTTTCCAGTCCACTACCGATGGGAAGAAGTTTGTTGATGTCTTGCGCGATCAGAAGATTGTACCTGGAATCAAAGTTGACAAGGTGTCCTTTTTAACTTGTTTCTATGCCTTGTGTAACTTCTTCTGTGCTTTAGGATTTTGCTGCTACCTTTCTTAAACTTTTGTTGCAAATATTTTTGTTGGTGAACTTCGTGCAATTTAACAGTTCTTTTTTTACTTACAGGGTTTGGTTCCCCTACCAGGATCCAACAATGAATCCTGGTGCCAAGGATTGGATGGATTGGCTTCTAGGTCTGCTGAATACTACAAGCAAGGGGCACGTTTTGCCAAGTGGTATGTTGTGACCTTGCACTTTTCTACTGCTATTCCTCTCTCATGTTTTCTCTTATTCTTTCCTCGGAAGATCAAAGTGCATTTAACTTTTCTGAAGAGTTATGGAACATAAATGGCATGCGGCTTCAAAATTTTCAGGAGAACAGTTGTTAGCATTCCTTGCGGTCCTTCTGCTTTGGCTGTAAAAGAAGCAGCTTGGGGTCTTGCTCGATATGCTGCTATATCTCAGGTAACTTTTAGGACTTTTTCTATCTTTCCGAAGTTGTACTAGAAAATGTGAGATAATTAAGTCAACAGACCCACCCCCTTAGTTGGTTGAACTTGTTTTTGGATATCCTCCGATCTTCAGAATTGGAGGATAATTTTTAAGAATCTGCATGATCTGGGGAACAATGGAAGTTTGTCTTTCTATTTATGGATGGTTAAAGATCATTTTTTTTCCTACAGGACAATGGTTTAGTGCCAATAGTAGAGCCTGAGATTCTTTTGGATGGTGACCACCCAATAGAACGAACCCTTGAAGTTGCGGAACGTGTTTGGGCAGAAGTCTTCTACTACCTAGCAGAAAACAATGTCGTTTTTGAAGGTATTTTGCTCAAACCTAGCATGGTTACTCCTGGTGCTGAACACAAAGAGAAGGCTACCCCAGAAACCATTGCTAAATACACACTTACCATGTTGAGGAGAAGAGTTCCTCCTGCAGTTCCTGGAATCATGGTACGACTTACTTTCTTCAATTCGCTCATTTGTTTCTCATTTGATCAAAATTATCCATAGAAAGATTAGACTTTATAGAAACTACACTCTTGGACCTTATTTCTTTGAAAAACTATAGTTAAGTTGCTACTTTCTTTCTCTTTCTCTTTTTCTTGTTCAACTGTGCTAAAAATCGTGTTTTTCTACTTATCAGTTTCTGTCCGGAGGACAATCTGAAGTGGAAGCGACACTCAACCTCCACGAAATGAACCAGAGCCCCAACCCATGGCATGTATCTTTCTCATATGCAAGAGCACTCCAGAACACAGTGCTCAAGACATGGCAAGGACGTCCTGAGAATGTGGATGCTGCACAGAGGGCACTCTTGATTCGTGCAAAAGCAAACTCCTTGGCTCAGCTCGGAAAATACTCCGCAGAAGGTGAAAGTGAGGAAGCCAAGAAGGGAATGTTTGTCAAGGGCTACACCTACTAAGCACACTTTGCTTTGATGCGACTTTCTTTTTGTGTATTTTTCAGTTTTTGTTGTTTGCTAGATTCGAATGCTGAAGAGAGAACTAATTGCTCTTTCTTCTTTTTTGATCTTACATTAGTACTGTACTTCACTAATAAGCTATGAGGGGTGATTCGTCGAAATACAATCCCAGAAAATGCTCGGTTGTGTAGAAAATCTTGTATAATTATATTGAGAACTTCTTAAAACGGGTAATATTTTCCATGTCTCCATTTGCTCTTCATAGTTTAAATTCCTCTTTGTTAGCCAGA

Download sequence region

Download sequence (3.3Kb)

Get flanking sequences on SL2.50ch05

mRNA Solyc05g008600.2.1

Ontology terms

terms associated with this mRNA

GO:0005507 – copper ion binding

cDNA sequence

spliced cDNA sequence, including UTRs

Protein sequence

translated polypeptide sequence

Related features

Features that derive from this mRNA

Type	Name	Location	Length	Strand	Phase
polypeptide	Solyc05g008600.2.1	SL2.50ch05:2917195..2920087	396	-	n/a

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Features this mRNA is a part of

Type	Name	Location	Length	Strand	Phase
gene	Solyc05g008600.2	SL2.50ch05:2916906..2920232	3,327	-	n/a

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Features that are parts of this mRNA

Type	Name	Location	Length	Strand	Phase
exon	exon:Solyc05g008600.2.1.1	SL2.50ch05:2919920..2920232	313	-	n/a
exon	exon:Solyc05g008600.2.1.2	SL2.50ch05:2918636..2918905	270	-	n/a
exon	exon:Solyc05g008600.2.1.3	SL2.50ch05:2918385..2918494	110	-	1
exon	exon:Solyc05g008600.2.1.4	SL2.50ch05:2918156..2918246	91	-	n/a
exon	exon:Solyc05g008600.2.1.5	SL2.50ch05:2917668..2917937	270	-	n/a
exon	exon:Solyc05g008600.2.1.6	SL2.50ch05:2916906..2917474	569	-	n/a
intron	intron:Solyc05g008600.2.1.2	SL2.50ch05:2918906..2919919	n/a	-	n/a
intron	intron:Solyc05g008600.2.1.3	SL2.50ch05:2918495..2918635	n/a	-	n/a
intron	intron:Solyc05g008600.2.1.4	SL2.50ch05:2918247..2918384	n/a	-	n/a
intron	intron:Solyc05g008600.2.1.5	SL2.50ch05:2917938..2918155	n/a	-	n/a
intron	intron:Solyc05g008600.2.1.6	SL2.50ch05:2917475..2917667	n/a	-	n/a

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Related views

Genetic loci

Tomato locus ddtfr6a (ripening regulated protein (DDTFR6/A))

http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17815970%2Fdetails feature 17815970

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Accessions	Seedlots
Accessions		Breeding Program	Seedlot Name	Contents	Seedlot Location	Count	Weight(g)

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