Solanum lycopersicum mRNA Solyc05g007130.2.1

mRNA details  
Name
Solyc05g007130.2.1
Type
mRNA
Length
1,959
Organism
Solanum lycopersicum
Description
Calmodulin binding protein (AHRD V1 **-* B6T984_MAIZE); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region
Location(s)
SL2.50ch05:1694652..1699497
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Length
4846
Nb exon
6
Sifter term
GO:0005516
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g007130.2.1 Calmodulin binding protein (AHRD V1 **-* B6T984_MAIZE); contains Interpro domain(s) IPR000048 IQ calmodulin-binding region

ATGGGAAAATCTCCTGGAAAGTGGCTCAGGTCATTGTTGCCAGGGAAAAAGTCTTCCAAATCTGGCACATCAAAGAAATCTTCAAATGAGAAAGCATCTGTAATTTCCACCAATGCGGCATTGTCCGGTTCGTCTGTCCATCTGCCATTGATATCTGAACCAGTTGCTTGTAATGCTGGTGGAATAAAAGAAGACTCGAACTTTGAGAAAGGAGGGGTCACTAATGAGGTGATTCTCCCTTCTATCGAGCGAGATGGAGACGAACAGAATACTTGTCTTACCTTACCTGAGGATACTGAGAAAATGAGGCTTGAGCAAGCAGCTACAAAGGCACAAGCTATTGTTAGGGGTTATCTGGCTCGCCGAGCATTTCTTAGGCTCAAGGGGACCATAAGGCTACAAGCTGCAGTACGTGGCCATCTGGTCAGAAGGCAGGCTGTTGCTACATTATACTGTATACATGGCATTGTCAAACTTCAAGCAAATATCCGTGGCCAGATTGCTAGACGTTCCAGTATTGGCTGTGAACTAATAACCAAACAAGGACTTGAAAAACAGGATGCCAAACAATTGGATTATCAGAGAGCTAATGCATCCAAACTAGCACGGGAGCTATCCACTAACGGATTCACTACAAAGCTACTTGCTTCATTACCTACTGGAATGCCTCTACACCTCCATTATGGTCAAGAGGAGCCAAATTCTAGTCAGGAATGGCTTGTCCGTTGGACTATATCACAGATTTGGCAACCACGATCTAAACTGGAAACACTTCCGGGAAAAAAACATCAAAATGCTGAAGCAGACATTGCTATGTCAAAGCACAGTGTAAGGAAAGTACATTCTAAAAAAATGCAGAACGGTTCAAATCATTCCACTTCTTCGGGGTCAGAAAAGAAGAAATCAAGTCATTTGGTAAACTCTGTTCTTCAGAATCCAGGAAGTGAGATTAAGAAGGTAAAACATAGTTTAAAGAAAACGTCCAGCCCTATATTGGAAAAACCAGTTCAGTCTGAGGTTGACACTGAGCGAAAAAGGCAAAGTCATGACAAATCATCAAGCATGGCATCTGATGAACCATTGAAAAATTCAGAAGGGACAGTTGAAAATTCTACTAATGTGGCCCCACCTCCCGTAGTGGTGGACGATACTATCACTCATTTGGATATCCTTTCTGTATCTGATACTCATCACAAATCGACTACTGATGCTGCGGATCAGAAATCGATCACTGATAACAGAGAGGATGATACTCCTGTCGCGAATGAGGATTTTTGTACTAACCATGATAATAATGAAGGAAGTGAGAGCAACAAGGTTAACAGAAGAGTTTCTTTACCTGCAAAGCATGATGTCGATGCAAGTACACCCACAACAAGAAAGGTGCCCAGCTACATGGCTCCAACCAAGTCTGCTAAAGCTAAGCTGAAGGAGCAAGCCTCACCAAGGTTTGGGCAAGATGTGGCTGAGAAGAATGCCGTAACCAGACGTCATTCTTTACCGTCCCCTATGAATGGAAAGCTGAGTTCATCACCATCACCACGGGTGCAGAGGCTGGTCCAAGCTAGTGCTAAAGAAGGAATCAAGATCGACAGATCTTTATCGTCTTCAAGGGATGGTACTGATAAGATGACTCGAGCAGAATGGAAGCGGTAACTCTGCAAGAATCTCAGATGTAGCAGGAAAGTAGTACCCGAGGATCGATCACTGACAGAACAAAACTTCATTATGTCCATAATCCTACTTTTGATGTTAGAAAGGAACTAAATTATAAGATATAGATGGTGTGCCTTTTGTTGTCTTTAAATTTTGCTTGGGAAATATTGCAAGAGTTTGTACTTGCTAGACTTTAGTTATAGGTTTGTCTTGTTAAGGCTTTAGTCAGGTTGAGTTGATATAAAATGTGTGTTTTTAGGCAAAATCTATCTGTATGTTCAGTTAATGTTTTGCTTTGAAATG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g007130.2.1SL2.50ch05:1694651..1699194552+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g007130.2SL2.50ch05:1694652..16994974,846+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g007130.2.1.1SL2.50ch05:1694652..169472675+n/a
exonexon:Solyc05g007130.2.1.2SL2.50ch05:1695387..1695668282+n/a
exonexon:Solyc05g007130.2.1.3SL2.50ch05:1696625..1696825201+n/a
exonexon:Solyc05g007130.2.1.4SL2.50ch05:1697331..169741181+n/a
exonexon:Solyc05g007130.2.1.5SL2.50ch05:1697736..1698720985+n/a
exonexon:Solyc05g007130.2.1.6SL2.50ch05:1699163..1699497335+2
intronintron:Solyc05g007130.2.1.1SL2.50ch05:1694727..1695386n/a+n/a
intronintron:Solyc05g007130.2.1.2SL2.50ch05:1695669..1696624n/a+n/a
intronintron:Solyc05g007130.2.1.3SL2.50ch05:1696826..1697330n/a+n/a
intronintron:Solyc05g007130.2.1.4SL2.50ch05:1697412..1697735n/a+n/a
intronintron:Solyc05g007130.2.1.5SL2.50ch05:1698721..1699162n/a+n/a
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Related viewsNone found
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