Solanum lycopersicum mRNA Solyc05g007020.2.1

mRNA details  
Name
Solyc05g007020.2.1
Type
mRNA
Length
1,514
Organism
Solanum lycopersicum
Description
Potassium voltage-gated channel subfamily H member 1 (AHRD V1 *--- KCNH1_RAT); contains Interpro domain(s) IPR013655 PAS fold-3
Location(s)
SL2.50ch05:1607827..1612548
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0000160
  • GO:0006355
  • GO:0007165
Length
4722
Nb exon
8
Sifter term
GO:0005515
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g007020.2.1 Potassium voltage-gated channel subfamily H member 1 (AHRD V1 *--- KCNH1_RAT); contains Interpro domain(s) IPR013655 PAS fold-3

TACATACCCCCAATTCTTATTGTTCATTCAATACCTTACAACTTAGATATTTTTCTCCATCTGAAGTTCCCAATTATACTAGTTGACACATGGGATTGAGATTGGGGTTAATCTTTGTTGATAAAGTTAGAGTCTTTAAGCCAAAACAAGTTGAATCAGTATGGAATCACAACTGGGTTTAATTGAAAAATCATTTAATGTTAAATACTCAGATGGGGTTAGAGAAGCTCTTGATGAATTGCCTGATAGTTTTACAATTACTGATCCCTCTATTTCTGGTCACCCTATTGTTTATGTATCAAGGGGTTTCTTGAAAGTATTTGGTTATTCAAAGAATGAGGTTTTAGGGAAGAATGGAAGGGTATTTCAAGGGCCTAAGACTAATAGAAGATCAGTTATGGCGATTCGAGAGGCGATTCGTGAGGAGAGGGGTATACAGATTAGTTTGTTGAATTATAGGAAGGATGGGACACCCTTTTGGATGTTGTTTAATATGTGTCCTGTTTATAGTGAGAAGGATGGGAGGGTGGTTCATTTTTTGGGAATTCAAGTGCCTATTTTGAGGAGGAGAAATTCACTAGGTGGTGGAATTGGGAGAAATGGAGGAGTATGTTATGATGGAGGTAATTGCAGGGGGTATGTCTATAAGTGTTGTAGGAGGGAGGTTTGCTCGAATTCGATGATGGAAATGGACAGAGCGTTATCGGTTGATTCAGTTTCGGGGTTGGACCATACAGAAGTAGATGTTGAAGGACCTTGTGAAGCAAGTGATCAAGAGAAGACAAAAGCCAGTGTTGCTGTCAACAACATAATGTCCGTGTTGGCAAACTACAGTGAGTTGAATGGCAGACTGGTCATTGACAGGAGATGCTGTCAATCGGGAACGAGTCTGCTCAGTGCATCCTTAAATATATCTTTTGGTAGAATAAAACAAAGCTTTGTATTAACTGACGCACACTTACCAGACATGCCAATTGTCTATGCAAGTGATGCCTTCCTAAAATTAATAGGCTACTTGAGACATGAAGTATTGGGTCGTAATTGCCGGTTTTTAAGTGGGGAAGATACAGAGAGAGGCACACAATTTCAGATAAAACAATGCATCCAAAATGAACAACCGTGTACTGTACATATCTTAAATTACAGAAAAGATGGAACGTCATTTTGGAATTTTCTTCACATCTCACCGATCCGAAGTGCTTCAGGAAAGGTCGCGTATTTTGTTGGCATTCAGATAGAAGATACTACCGAGGCTCGGGAGAAACAAGGACTGAATCCGGAAATGAGGCATCGCAGTGTTGTAGCTGCTGTAAAGGTGGCTGTGAGAGGGTGGTCAATGGGTGCAAGTACCTCCTAGTTCATGAAGAAATTTGTGTTTTGCTTTTTTTGGTTCTGATAAACAAACTGGACTCTGCTGAAAAAAATGTACTCTTGTTAGCTCATTGGTACCAGAAAAAAAAAAAAACATAAACAAGTATGTTATGGTAATTTAATTTTGATCTTTTCTTTGTCAG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g007020.2.1SL2.50ch05:1607983..1612107399-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g007020.2SL2.50ch05:1607827..16125484,722-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g007020.2.1.1SL2.50ch05:1612489..161254860-n/a
exonexon:Solyc05g007020.2.1.2SL2.50ch05:1611531..1612207677-2
exonexon:Solyc05g007020.2.1.3SL2.50ch05:1610631..1610838208-1
exonexon:Solyc05g007020.2.1.4SL2.50ch05:1610462..161052665-2
exonexon:Solyc05g007020.2.1.5SL2.50ch05:1610234..161031380-n/a
exonexon:Solyc05g007020.2.1.6SL2.50ch05:1609984..161003956-1
exonexon:Solyc05g007020.2.1.7SL2.50ch05:1609830..160989364-n/a
exonexon:Solyc05g007020.2.1.8SL2.50ch05:1607827..1608130304-n/a
intronintron:Solyc05g007020.2.1.2SL2.50ch05:1612208..1612488n/a-n/a
intronintron:Solyc05g007020.2.1.3SL2.50ch05:1610839..1611530n/a-n/a
intronintron:Solyc05g007020.2.1.4SL2.50ch05:1610527..1610630n/a-n/a
intronintron:Solyc05g007020.2.1.5SL2.50ch05:1610314..1610461n/a-n/a
intronintron:Solyc05g007020.2.1.6SL2.50ch05:1610040..1610233n/a-n/a
intronintron:Solyc05g007020.2.1.7SL2.50ch05:1609894..1609983n/a-n/a
intronintron:Solyc05g007020.2.1.8SL2.50ch05:1608131..1609829n/a-n/a
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Related viewsNone found
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