Solanum lycopersicum mRNA Solyc05g006590.2.1

mRNA details  
Name
Solyc05g006590.2.1
Type
mRNA
Length
1,530
Organism
Solanum lycopersicum
Description
Serine/threonine-protein phosphatase (AHRD V1 **** Q6VUQ6_SOLLC); contains Interpro domain(s) IPR006186 Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase
Location(s)
SL2.50ch05:1214286..1219211
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0016787
Length
4926
Nb exon
6
Sifter term
GO:0017018
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g006590.2.1 Serine/threonine-protein phosphatase (AHRD V1 **** Q6VUQ6_SOLLC); contains Interpro domain(s) IPR006186 Serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase

TATGCCTATTGTTTACATTTTCATTTTCCTTTTTGCTGCAATTTTCACAGTAGAGAGAAGCTTCGCATGAATGGAGACGAATTTCAGAAACAGGAGATGATTCAGAGATTGAAACCCTAGTTTCTTCATCAATGTTCCAATCGTTAATTTCTGTTTGATTTTAATCTTCGGCGTGCAAAAACTCCGATTCTGTTGGTCAATTTCATAGCAATTGGATTTTACCTCGATTCGATCTGAGGACTTTTGGGTCTTTTTTTGCTAATCGAAGCGGTGAGGAATATTTAGGCAGGTGATTGTAGAGGATAATTTTGTTTGAAAAAATGCCGTCGCACGCGGATGTAGATCGGCAGATCGAGCAATTGATGGAGTGCAAGCCGTTATCGGAGGCGGAGGTGAAGACGTTGTGTGAACAAGCAAGGGCGATACTAGTGGAGGAATGGAATGTGCAACCGGTGAAATGTCCGGTGACGGTGTGCGGTGATATCCATGGACAGTTTTACGATCTGATTGAGCTTTTTCGAATCGGCGGCAACGCTCCTGATACTAATTATCTCTTCATGGGAGATTATGTTGACCGTGGATACTATTCTGTCGAGACTGTCTCACTATTGGTTGCTTTGAAGGTTCGTTATAGAGATAGAATCACAATTCTTAGGGGAAACCATGAAAGCCGACAGATCACTCAAGTGTATGGTTTTTATGATGAATGTTTGAGGAAGTATGGAAATGCCAATGTTTGGAAGTATTTCACTGATCTCTTTGATTATCTACCATTGACGGCACTCATAGAGAGTCAGATATTCTGTTTGCATGGAGGACTCTCACCATCCCTTGATACACTTGATAACATCCGAGCACTGGACCGTATACAAGAGGTGCCACATGAAGGGCCGATGTGTGATCTCCTATGGTCTGATCCAGACGATCGCTGTGGTTGGGGAATATCACCTCGGGGGGCTGGTTACACATTTGGACAGGATATAGCATCTCAGTTTAATCACACTAATGGTCTCTCACTGATTTCTAGAGCCCATCAGCTTGTCATGGAAGGTTTTAATTGGTGTCAGGATAAGAATGTTGTAACAGTATTTAGTGCTCCAAACTATTGTTATCGCTGTGGTAATATGGCTGCAATCCTAGAAATAAGTGAAAACATGGAGCAGAATTTCCTTCAGTTTGACCCAGCTCCACGACAGATTGAGCCTGATACTACAAGGAAGACTCCAGACTACTTCTTGTAATCCGAATACTTGAGCTGACTGTTTGTAGCCCATCAGTATCGTATCTTGTAGATGTGTCTTTAAAAAAAAAGGTTATGTTATTTGAGGATTAGTATCATCATCATTGTTTTGTTTGGAGTTTGCTCTGCTGCTGGCTTTTAACATATGCCCGTAGATTCGCCAGAGTTTTGACAAAAAGCCCTTAGTGTCTCTTGTCTCGTATAATTTTTTGCAAAAAGAAGCAGCAATAACATGGTACATTGTGATTTGTTATTAAAGTTTATCGTAGAAAGCAGGTTCTTTCAGGTAC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g006590.2.1SL2.50ch05:1214574..1218891307-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g006590.2SL2.50ch05:1214286..12192114,926-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g006590.2.1.1SL2.50ch05:1218639..1219211573-2
exonexon:Solyc05g006590.2.1.2SL2.50ch05:1217620..1217734115-1
exonexon:Solyc05g006590.2.1.3SL2.50ch05:1215769..1215877109-n/a
exonexon:Solyc05g006590.2.1.4SL2.50ch05:1215608..121568578-n/a
exonexon:Solyc05g006590.2.1.5SL2.50ch05:1214884..1215075192-n/a
exonexon:Solyc05g006590.2.1.6SL2.50ch05:1214286..1214748463-n/a
intronintron:Solyc05g006590.2.1.2SL2.50ch05:1217735..1218638n/a-n/a
intronintron:Solyc05g006590.2.1.3SL2.50ch05:1215878..1217619n/a-n/a
intronintron:Solyc05g006590.2.1.4SL2.50ch05:1215686..1215768n/a-n/a
intronintron:Solyc05g006590.2.1.5SL2.50ch05:1215076..1215607n/a-n/a
intronintron:Solyc05g006590.2.1.6SL2.50ch05:1214749..1214883n/a-n/a
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Related viewsNone found
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