Solanum lycopersicum mRNA Solyc05g005700.2.1

mRNA details  
Name
Solyc05g005700.2.1
Type
mRNA
Length
1,828
Organism
Solanum lycopersicum
Description
Aldehyde dehydrogenase 1 (AHRD V1 **** Q84V96_LOTCO); contains Interpro domain(s) IPR015590 Aldehyde dehydrogenase
Location(s)
SL2.50ch05:514498..518886
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0055114
Length
4389
Nb exon
11
Sifter term
GO:0004029
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc05g005700.2.1 Aldehyde dehydrogenase 1 (AHRD V1 **** Q84V96_LOTCO); contains Interpro domain(s) IPR015590 Aldehyde dehydrogenase

ATAAAGTTTGCTACTTTTTTTTCTCCTTGAAAACAGTGCTGTAATTTTCATCTCCAATAATGGCGGCTCGTGTATTTCTCTCTCGTTCTGTTCATCTGCTATCAAAGGGAAAAAGATCCCATCTTGGCAAAATAGCTGCTTATAAATACAGCACAGCGGCTGCTTTCGAGGAGCCCGTCAAGCCTACTGTCAATGTGGATCATACTAAACTTCTTATCAACGGGCAATTTGTTGATTCTGCATCAGGAAAAACTTTCCCGACTCTCGACCCCAGGACAGGGGAGGTAATTGCACATATTGCTGAAGGTGATGCAGAAGATATTAATCGGGCAGTTGCTGCTGCTCGTAAGGCTTTCGATGAAGGACCATGGCCTAGGATGACTGCTTATGAAAGGTCAAAGATATTGCTGCGCCTTGCTGATCTGATTGAAAAACATAACGATCAAATTGCAACGCTCGAGACTTGGGACACTGGGAAGCCTTATGCACAAGCTGCTAAGATTGAAGTACCAATGGTTGTACGTCTACTCCGTTATTATGCTGGCTGGGCAGATAAAATTCATGGTATGACCATTCCTGCCGATGGACCATATCATGTTCAAACGTTGCATGAACCGATCGGGGTTGCTGGTCAGATTATCCCATGGAATTTTCCTCTTCTCATGTTTTCTTGGAAGATTGGCCCTGCTTTAGCTTGTGGTAACACAATTGTGCTAAAGACGGCTGAGCAGACCCCATTATCTGCATTGTATGTAGCAAGTCTATTTCAGGAGGCTGGCCTGCCTGAAGGTGTTCTGAATATAATTTCTGGTTATGGTGCCACAGCTGGTGCTTCTCTGTGTAGTCATATGGATGTGGATAAGCTTGCTTTTACTGGATCAACAGAAACCGGGAAAACCATACTTGAATTGGCTGCTAAGAGCAATCTTAAGCCTGTGACATTGGAACTTGGAGGGAAATCCCCTTTTATTGTTTGTGAGGATGCTGATATTGATACGGCCGTTGAACAAGCTCATTTTGCTCTCTTCTTTAATCAGGGCCAATGTTGTTGTGCTGGTTCTCGGACCTATGTTCACGAGAAGGTCTATGATGAATTTCTGGAGAAGGCAAAGGCACGCGCCTTGAAACGAGTAGTTGGTGATCCGTTTAAATCAGGCACTGAGCAGGGTCCTCAGATTGATTCAAAACAGTTCGATAAGATCATGAAGTACATTAGATCTGGTGTTGATAGTGGAGCTACTCTTGAAACTGGCGGTGAGCAATTTGGTAAAAAGGGATACTATATTAGGCCCACCGTCTTCTCTAATGTTAAGGATGATATGCTGATTGCACAGGATGAGATTTTTGGTCCAGTACAGTCCATCTTAAAATTTAAGGATCTTGATGAAGTGGTACGGAGAGCTAATAGTTCTCGGTATGGTCTAGCTGCTGGAGTATTTTCACAGAACATCGACACTGCAAACACGTTGGCACGAGCCTTGAGAGTTGGGACGGTATGGATTAATTGCTTTGATACGTTTGATGCTACAATTCCTTTTGGTGGCTATAAGATGAGTGGTCAGGGAAGAGAAAAGGGAGAATACGGTCTCAAAAATTACTTGCAAGTAAAGGCAGTTGTGACACCATTGAAGAATCCAGCATGGTTATAAACATAATCCTCTTAAAGCAATTTTTACAAATAAAACTAAATTATAGTGATATCAAGTTGCTCTAGTTCATGATGTTGATAACGATAAATGTTGATTTTCTTTCAAAACTTCTTTTATATACAAACTGCATTTGATGTCAATTGGCAACTAGTTTTATTACATTCACATTTCTCCTCTTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc05g005700.2.1SL2.50ch05:514676..518827530-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc05g005700.2SL2.50ch05:514498..5188864,389-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc05g005700.2.1.1SL2.50ch05:518779..518886108-2
exonexon:Solyc05g005700.2.1.10SL2.50ch05:515039..51510062-1
exonexon:Solyc05g005700.2.1.11SL2.50ch05:514498..514950453-n/a
exonexon:Solyc05g005700.2.1.2SL2.50ch05:517843..517980138-2
exonexon:Solyc05g005700.2.1.3SL2.50ch05:517591..517733143-n/a
exonexon:Solyc05g005700.2.1.4SL2.50ch05:517344..517497154-2
exonexon:Solyc05g005700.2.1.5SL2.50ch05:517004..517233230-n/a
exonexon:Solyc05g005700.2.1.6SL2.50ch05:516599..51668890-n/a
exonexon:Solyc05g005700.2.1.7SL2.50ch05:515706..515879174-n/a
exonexon:Solyc05g005700.2.1.8SL2.50ch05:515477..515614138-n/a
exonexon:Solyc05g005700.2.1.9SL2.50ch05:515186..515323138-n/a
intronintron:Solyc05g005700.2.1.10SL2.50ch05:515101..515185n/a-n/a
intronintron:Solyc05g005700.2.1.11SL2.50ch05:514951..515038n/a-n/a
intronintron:Solyc05g005700.2.1.2SL2.50ch05:517981..518778n/a-n/a
intronintron:Solyc05g005700.2.1.3SL2.50ch05:517734..517842n/a-n/a
intronintron:Solyc05g005700.2.1.4SL2.50ch05:517498..517590n/a-n/a
intronintron:Solyc05g005700.2.1.5SL2.50ch05:517234..517343n/a-n/a
intronintron:Solyc05g005700.2.1.6SL2.50ch05:516689..517003n/a-n/a
intronintron:Solyc05g005700.2.1.7SL2.50ch05:515880..516598n/a-n/a
intronintron:Solyc05g005700.2.1.8SL2.50ch05:515615..515705n/a-n/a
intronintron:Solyc05g005700.2.1.9SL2.50ch05:515324..515476n/a-n/a
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Related viewsNone found
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