Solanum lycopersicum mRNA Solyc04g082140.2.1

mRNA details  
Name
Solyc04g082140.2.1
Type
mRNA
Length
2,033
Organism
Solanum lycopersicum
Description
Laccase-22 (AHRD V1 **-- LAC22_ORYSJ); contains Interpro domain(s) IPR001117 Multicopper oxidase, type 1
Location(s)
SL2.50ch04:65917721..65922594
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0055114
Length
4874
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g082140.2.1 Laccase-22 (AHRD V1 **-- LAC22_ORYSJ); contains Interpro domain(s) IPR001117 Multicopper oxidase, type 1

ACCCCCACCCCCACACGCTGGTTCGAGAACCCACTCTTTTTTCTTTTAAAATCCTTCTATTTCCACTCTGTTTTCCTTATTATAGCAAATTGCAGTGCTAACATAAAGTAAAGTAGAAAAATATGTTGCCGCTAAAATTCGCCGTAGCGGTGTTTTTAGTGGTATTAATTGGGAATTCTGTTGTAGCAGAAGATCCTTATAGATATTTCGATTGGAATGTCACTTATGGAACTATATATCCTCTCGGAGTTCCTCAACAGGGAATTCTGATTAATGGTCAATTTCCTGGTCCTGATATCAACTCGGTCACCAATGACAATCTCGTTATCAATATCCACAACAGCTTGGATGAACCTTTTCTACTTTCCTGGAACGGAGTACAAAACAGAAGAAACTCATTTGTAGATGGAGTATATGGAACAACATGCCCAATACCGCCAGGGAGAAATAACACATTCAATCTACAAGTGAAGGATCAAATAGGGAGTTTCTATTACTTCCCATCTCTTGCATTCCACAAAGCTGCTGGTGGTTTTGGAGGGATTAGGATTCTCAGCAGGCCTAGAATCCCCGTCCCTTTTCCGGACCCTGCAAACGACTACACCATCCTCATTGGAGATTGGTACAAAAAGAACCACACGGACTTGAAAGCAATTCTTGACGGAGGCAGGAAGTTACCTTTCCCTGATGGCATTCTTATCAATGGTCGTGGTCCTAATGGTGTTACATTCACAGTCGATCAAGGGAAAACCTATAGATTGAGGATATCAAACGTTGGATTGCAAAATTCATTGAATTTCCGCGTTGAAGGACACAAAATGACATTAGTTGAAGTAGAGGGAACACACACATTGCAAACAACTTATTCCTCACTTGATGTCCATGCTGGCCAATCTTACTCTGTCCTCATTACAGCTAATCAAGAAGCAAAAGACCATTACATCGTTGTTTCATCTCGTTTCACGACTCCAGTCCTCACCACCACTGCTGTACTTCACTATAGCAGCTCTAACACCCCCGTCTCTGGTCCTCCTCCTGGTGGACCTACCATCCAAATCGACTGGTCCCTTAATCAGGCCCGCTCCATCAGGACAAACTTGTCAGCAAGTGGACCAAGGCCAAACCCACAAGGTTCATACCATTACGGTATGATCAACACAACTAAAACCATCAGACTTGCTAGCTCTGCTGGTCAAGTGAATGGCAAACAGAGATATGCTGTCAACAGCGTGTCGTTTGTGCCACTTGATACTCCTCTAAAACTACTCGACTACTTCAAGATTGGCGGATTCAGAGTTGGAAGCATACCTGATTCCCCAACTGGTGGAGGAATTTACCAAGACACGTCTGTTCTAGGTGTTAATTACAGGCAATTCATTGAGATTATATTCGAAAATAATGAGGACATCGTCCAGAGCTGGCATCTTGATGGCTACTCTTTTTGGGTTGTAGGGATGGATGGAGGCCAGTGGACTCAAGCTAGTAGGAACGGATACAACCTTCGTGATGCAGTTTCACGTTGCACAACTCAGGTCTATCCCAAGTCATGGACCGCGATATACATTGCATTGGACAATGTAGGAATGTGGAACCTGAGGACTGAATTCTGGGCACGACAGTACCTCGGTCAACAACTATACATGAGAGTTTACACAGACTCAACCTCATTGAGAGACGAATATCCAATTCCAAGAGGCGCTCGTCTTTGTGGCAAGGTGGCTAATCGGCACACACGACCACTTTAAAGCAAATTCTGCAATTCTAGTAGAGGATAATTTAATTTTATACAATCCTTTTGTATTATTTGAGTTTAGAAGTAATGCCTTGTTACTACTAGTAGCTGCTAAAATGACCTTAGCTCAAGGTCGCATTCTTTCTTCAATTCCACGAAAACATTATATTTTGTTCTTTCCTCATTGTTGTAGTTACCTTAAATTATGATAAATGAAGTGCATTTTGAATTATCGTATGCACATTGGCAGATTCCATGTTTTTTACATTCTTTTGGGTCTCCAATGTGACTAATTTTAATT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g082140.2.1SL2.50ch04:65918008..65922472541-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g082140.2SL2.50ch04:65917721..659225944,874-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g082140.2.1.1SL2.50ch04:65922335..65922594260-n/a
exonexon:Solyc04g082140.2.1.2SL2.50ch04:65922117..65922226110-1
exonexon:Solyc04g082140.2.1.3SL2.50ch04:65919960..65920230271-n/a
exonexon:Solyc04g082140.2.1.4SL2.50ch04:65919363..65919465103-2
exonexon:Solyc04g082140.2.1.5SL2.50ch04:65918921..65919266346-1
exonexon:Solyc04g082140.2.1.6SL2.50ch04:65918468..65918830363-1
exonexon:Solyc04g082140.2.1.7SL2.50ch04:65918301..6591837979-n/a
exonexon:Solyc04g082140.2.1.8SL2.50ch04:65917721..65918221501-n/a
intronintron:Solyc04g082140.2.1.2SL2.50ch04:65922227..65922334n/a-n/a
intronintron:Solyc04g082140.2.1.3SL2.50ch04:65920231..65922116n/a-n/a
intronintron:Solyc04g082140.2.1.4SL2.50ch04:65919466..65919959n/a-n/a
intronintron:Solyc04g082140.2.1.5SL2.50ch04:65919267..65919362n/a-n/a
intronintron:Solyc04g082140.2.1.6SL2.50ch04:65918831..65918920n/a-n/a
intronintron:Solyc04g082140.2.1.7SL2.50ch04:65918380..65918467n/a-n/a
intronintron:Solyc04g082140.2.1.8SL2.50ch04:65918222..65918300n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17810722%2Fdetails feature 17810722
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)