Solanum lycopersicum mRNA Solyc04g081750.2.1

mRNA details  
Name
Solyc04g081750.2.1
Type
mRNA
Length
2,052
Organism
Solanum lycopersicum
Description
FYVE, RhoGEF and PH domain-containing protein 6 (AHRD V1 *--- FGD6_HUMAN); contains Interpro domain(s) IPR000306 Zinc finger, FYVE-type
Location(s)
SL2.50ch04:65673246..65681962
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0008270
Length
8717
Nb exon
10
Sifter term
  • GO:0005515
  • GO:0035091
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g081750.2.1 FYVE, RhoGEF and PH domain-containing protein 6 (AHRD V1 *--- FGD6_HUMAN); contains Interpro domain(s) IPR000306 Zinc finger, FYVE-type

TACGAAACAAAGATCATCGATCAGAAGAGAGAGAAAAAAAAAAAAAACTCAAAGCTCTCTGAATTTCCCGAATCAAAAAATGCAACAAGGCGATTACACCACCTCCAATCCCTATTACAATTACCCTAACTCCGGCCATATCTCGCCGGCTCCGATCCCAAACCCCACCCCTTCACCACCGTCATACGCTTCTGCTCCGCCGTTCGCCGCCACTTACCCTCCATCTTCAGATTACTCATCATATCCCTCTTCTTACCCGAATCATTATACTCAAAATCCTGATTTACTCTCCACTGCTCCAGCACCTCCGTTACAGTCCTACAATCCTCCACCACCGGCGCAGGTTCCGGTTCCGGCGTTGCAACAGCCTCAGCACTCCTCTCCGTTTCCTTCGTTTGAATCCCACGGAGCTTATCAAAATCCAGTTCATTCTCAGCCTCAACAACCTTATTATCCTCCTTACGATCAACCCCAGGCTGCTCCTAGTTACAATCATAGTACCACTCCGAATTCTTCGTATCCTTCAGTTTATTCAACTCCAAATTATGATAATACTGGGAAGTTTGATCAAAGTGGACAGTATTTTGATGAACCTGTGGATAAGTATGGGAATTATGGTTCGGGGAGAGGTGAATTTGGGCAAGATACTTATGGGAAACGAGCTGAAAGTGGATATGGTAATGATGGTTATGGCGATGGGGTGTTTGCTTATCAGGGTAGTAAAGTAGAGCCTTATGGGGCACGAGGGACTGGTTCAAAGTCTTCGACTTGGTCGTCTAGTTTTGATGATTTTGGGAGGCCAATTGGGTATAATTCTCCGAAAGAACGTTCATCAGCTCCAACTGCAAAGATCGTCAAGGCAATTCCCAAGGTTGATACGCAGCAGGATGCGAAAAGTGGTGTTCAGAAGTTTAGGGTGAAGTTATTAGCTGAAAGTGGTGGACAGAGTACCCAGGATGTTCTTTGCCAGATTGGCTTGGATGGAATCCGCATGTTGGACCCAAGCACTAGCCGGATGTTAAGAATTTATCCTCTTGACACGGTAACTAGACTTGAGGCGACGGATTCATCTACCTTTGCCTTCTGGTCAAAAAGTGCAGTGGATATAGAACCAAGGCGTATCAGACTGCAGTCGAACAGTTACACAACCAGTTCCCTGTTAGATACAGTCACGGCTGCGGTTGTACAGTTCAAGGAGATGGGTGGAAGAATAATGTCTTCTGAATCTCCAAAGGTGGCAGAACAGCCTACTGAGAAGAAGAAAGGTCTTACTGATTGGATTAATATAGTGAAGACCGTCAATGAGGAGAAAGATCACTGGGTTCCTGATGAAGCAGTTTCCAAGTGCACAGCTTGTGGATCAGCCTTCAATGCTTTTGTGCGCAGGCATCACTGTCGGAATTGTGGAGATATTTTCTGTGACAAATGCACTCAGGGAAGAACTGCACTGACAGCTGATGAGAATGCACCAGTTGTTAGAGTTTGTGACCGATGTACGGCTGAGGTTTCTCGTCGGCTAAGCAGCGCGAAGGAAACTGTCAATAGATCAACTGGATTGCAAAGTCATGAAGACCTTGCCAAGAAGCTTCAGGAGGAGATGGAGAGAAACCGAAAAGGATCATCTGGCTCTAGACAAGATCGTTCGGGGAGGATGAAAGAGGTTGCTTGCCCTACTTGTACAGTACATTTGCAGGTTCAAGTTCCGAGCTCAGGTTCCGAGACTATAGAATGTGGTGTTTGCCAGAATCCATTCCTCGTTAGTTCGCACTGATTTTGATGTTTTCCGTCAATGGAAGGAAAGACTGCAAACTCTTTTCTGGTTTTTGTGTGTTCTCGTACATTGTTTCGTGCATCTGTTAATATTTGAACCGTTTGTGACGCGCCTTTGGTTGGTTGCTTGATCCTTGTTTCCTGGCAAGGCAATTTGCTCATTTGATTTGTATTAGCAGGAAGAAATCTAACACTTTTTTTTTTCTTTACATGGAGAAAATATAAGTGAATTTGATTCCAGTAACTCAAGTTTAAATCAATTTGATTTCTTAAACCCTTGTC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g081750.2.1SL2.50ch04:65673324..65681681564+n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g081750.2SL2.50ch04:65673246..656819628,717+n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g081750.2.1.1SL2.50ch04:65673246..65674215970+n/a
exonexon:Solyc04g081750.2.1.10SL2.50ch04:65681604..65681962359+2
exonexon:Solyc04g081750.2.1.2SL2.50ch04:65675318..6567540487+n/a
exonexon:Solyc04g081750.2.1.3SL2.50ch04:65675899..65676030132+n/a
exonexon:Solyc04g081750.2.1.4SL2.50ch04:65677758..65677889132+n/a
exonexon:Solyc04g081750.2.1.5SL2.50ch04:65679764..6567982966+n/a
exonexon:Solyc04g081750.2.1.6SL2.50ch04:65680170..65680280111+n/a
exonexon:Solyc04g081750.2.1.7SL2.50ch04:65680561..6568065393+n/a
exonexon:Solyc04g081750.2.1.8SL2.50ch04:65681300..6568133334+n/a
exonexon:Solyc04g081750.2.1.9SL2.50ch04:65681434..6568150168+n/a
intronintron:Solyc04g081750.2.1.1SL2.50ch04:65674216..65675317n/a+n/a
intronintron:Solyc04g081750.2.1.2SL2.50ch04:65675405..65675898n/a+n/a
intronintron:Solyc04g081750.2.1.3SL2.50ch04:65676031..65677757n/a+n/a
intronintron:Solyc04g081750.2.1.4SL2.50ch04:65677890..65679763n/a+n/a
intronintron:Solyc04g081750.2.1.5SL2.50ch04:65679830..65680169n/a+n/a
intronintron:Solyc04g081750.2.1.6SL2.50ch04:65680281..65680560n/a+n/a
intronintron:Solyc04g081750.2.1.7SL2.50ch04:65680654..65681299n/a+n/a
intronintron:Solyc04g081750.2.1.8SL2.50ch04:65681334..65681433n/a+n/a
intronintron:Solyc04g081750.2.1.9SL2.50ch04:65681502..65681603n/a+n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17810271%2Fdetails feature 17810271
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)