Solanum lycopersicum mRNA Solyc04g081300.2.1

mRNA details  
Name
Solyc04g081300.2.1
Type
mRNA
Length
2,120
Organism
Solanum lycopersicum
Description
Endoglucanase 1 (AHRD V1 ***- B6U0J0_MAIZE); contains Interpro domain(s) IPR001701 Glycoside hydrolase, family 9
Location(s)
SL2.50ch04:65336324..65341826
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005975
  • GO:0003824
Length
5503
Nb exon
7
Sifter term
GO:0004553
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g081300.2.1 Endoglucanase 1 (AHRD V1 ***- B6U0J0_MAIZE); contains Interpro domain(s) IPR001701 Glycoside hydrolase, family 9

TGAATCTGAAGACAAAAAAAAAAATCATCATCTTCATAAGAATATTGTCGGTGCCCTGTTCTATCCCTCAACTACCTCAAATCTCTCTTCTTTTAATTTAACCATTTTCATTTTCCACCCTAAATTTTCTCCATTATTTTCTTCATTCTCTCCAATCTTTTTCTTCTTTTGTGTTCTTGTTTATATTATTATTTTCACCTGCATTGCATATTAAAAGAACAAGTTTTTCAGCCATATAATCCCGCATTGTGTGTGCGGGATCATTAAATCAGTGCAGGTAAATTTGTTGAGGTGAATAAGGATGGGAGAGAAATCAAAAAAAGGGGGTTGGTGTGGATGGATTATAGCTTTGGTAGTGGTTGCTGCGGCTGCTGGAGCCATTGTGGTACTTTTTATGAAGAAGCATAATGGTTCTGGCTCAGATGCTGCTTCTGGTGCTTCTGAAAAGAAATATGGAGATGCTTTGAAAATTGCAATGCAGTTCTTTGATGTCCAAAAATCTGGGAAATTGGTAAATAATAAGATATCATGGAGAGGCGATTCAGCCGTCAAAGATGGAAGTCAAGAAAAGTTAGACCTCAGTCAAGGAATGTATGATGCTGGCGACCACATGAAATTTAATTTCCCAATGGCTTACACTGCCACTGTGTTGTCATGGGCCATCCTTGAGTATGGTAATCAGATGAAGGGTGTGGGCCAGTTGGAACCTGCTGAAGACTCACTCAAATGGATTACGGACTATCTTATCAATTGTCATCCAAAAGATGATGTTCTTTATATTCAGGTGGGTGATGCTGATGCTGACCATAAATGTTGGGACAGACCCGAGGACATGACTGAGGCAAGGCCTCTAATTCAGATAAATGCTTCTACCCCTGGAACAGAAGTTGCAGCTGAAACTGCTGCAGCTATGGCAGCAGCATCCCTGGTCTTCAAGTCGAAGAACTCAGCATACTCAAGTAACCTGCTTAAGCATGCTAAACAGTTGTTCACTTTTGCTGACAAACATAGAGGTACCTACAGCGAAAATATTCCTGAAGTCGCAACATATTACAATTCAACTGGATATGGAGATGAGCTCTTGTGGGCAGCAAGTTGGCTATATCATGCAACTGGGGATCAAATATATTTTGATTACGCGACTGGGAAAAATGCAGATTCTTTTGGTAATTTTGGAAATCCAACTTGGTTTAGCTGGGATAACAAACTAGCTGGTACTCAGGTTCTTTTGTCCCGGGTCAGCTTCTTTAATTCGAAAGTCTCAAACTCAGACACACTTCAACAGTACAAAAAAACTGCAGAAGCTGTAATGTGTGGTCTCTTACCAAAATCTCCAACAGCTACATCCAGCAGAACTGATAGTGGTTTGATATGGATAACTGAATGGAACGCGTTGCAGCATCCTGTAGCCTCTGCCTTCTTAGCTGTGCTGTACAGTGATTATATGCTCACTTCCAAGACTGATAAAATGACTTGTGATGGTAATGAGTATACACCATCTGATCTCAGAAAGTTCGCCATGTCCCAGGCCAATTATGTATTGGGTGACAATCCAGCAAAGATGAGTTATCTCGTAGGCTATGGGGACAAATATCCGCAGTATGTTCACCACAGAGGGGCTTCCATTCCTACAGACGCCAATACTAATTGCAAAGAAGGTTGGAAGTATCTAGACTCAACTGAACCAAATCCTAACGTTGCAACTGGGGCTCTCGTTGGTGGTCCATTTCTTAATGAGACATATATCGATTCAAGGAACAACTCGGTTCAAGGAGAGCCAACCACATACAATAGTGCTGTGGTTGTTGCCCTTCTTTCTGGTTTGGTTTCCACTTCCTCAGTGGTTCAATCTTTCACCTGAGCTGGATACCATCTCACGTCGTACGTCTCTTATCATACGTAGATGCATACATATTTTTTTTATTTCTTGTAGCTCCTTGAACCCATAAAGGTTGCTTTATATATATATGTGTGTATGTTAGTGTGTATCACATCAACTGTTCTTGTGTACTTATATCAAATATATGTGCCGAACAGGGATAAGAGTTTTTGTAGTATTACTTTGCTCAAAATCGTTATGCAAATTATCTCATGTTATGGCCATGAAGGTCTCTTATTCC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g081300.2.1SL2.50ch04:65336582..65341404520-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g081300.2SL2.50ch04:65336324..653418265,503-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g081300.2.1.1SL2.50ch04:65341555..65341826272-n/a
exonexon:Solyc04g081300.2.1.2SL2.50ch04:65341206..65341433228-2
exonexon:Solyc04g081300.2.1.3SL2.50ch04:65339701..65339984284-n/a
exonexon:Solyc04g081300.2.1.4SL2.50ch04:65338586..65339023438-n/a
exonexon:Solyc04g081300.2.1.5SL2.50ch04:65338157..65338295139-2
exonexon:Solyc04g081300.2.1.6SL2.50ch04:65337363..65337529167-n/a
exonexon:Solyc04g081300.2.1.7SL2.50ch04:65336324..65336915592-n/a
intronintron:Solyc04g081300.2.1.2SL2.50ch04:65341434..65341554n/a-n/a
intronintron:Solyc04g081300.2.1.3SL2.50ch04:65339985..65341205n/a-n/a
intronintron:Solyc04g081300.2.1.4SL2.50ch04:65339024..65339700n/a-n/a
intronintron:Solyc04g081300.2.1.5SL2.50ch04:65338296..65338585n/a-n/a
intronintron:Solyc04g081300.2.1.6SL2.50ch04:65337530..65338156n/a-n/a
intronintron:Solyc04g081300.2.1.7SL2.50ch04:65336916..65337362n/a-n/a
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Related viewsNone found
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