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Solanum lycopersicum mRNA Solyc04g081240.2.1

mRNA details  
Name
Solyc04g081240.2.1
Type
mRNA
Length
3,344
Organism
Solanum lycopersicum
Description
Auxin response factor 5 (AHRD V1 ***- D9IVB5_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor
Location(s)
SL2.50ch04:65224973..65230507
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0046983
  • GO:0006355
Length
5535
Nb exon
14
Sifter term
  • GO:0005515
  • GO:0010843
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g081240.2.1 Auxin response factor 5 (AHRD V1 ***- D9IVB5_SOLLC); contains Interpro domain(s) IPR010525 Auxin response factor

CAAGAAGATGTTGTCATGTTCTGTAGTATGTTTTCATTCCTCTTAAGAATCATTCCCTTGACTTGAAATGTGGGTTGGCAGTTATGTTAGTTTGAACTAAGAAAGATGTCATCTTGTTGACTTGCTGATTGGTGGTTAGAGGGAGTTCTTTTTTTTTTTTTTTGGAAAGATGGGGTCTTTGGTTTTGGTTTTGGGGTTGATGTAAAGGGAATCACAGAGGTTTTTATGGGTTCTGTTGAAGAGAAGAACAAGCCAGGGAGTTTGGTTAGTGGAGCACATACTCTACTTGAGGAAATGAAATTGTTGAAGGAAATGCAGGATCATACTGGGGGAGGAAGAAAGCTAATTAGTTCTGAGTTGTGGCATGCTTGTGCTGGCCCACTTGTAACTTTGCCTCAGGTTGGAAGCCTTGTGTATTACTTCCCACAGGGGCACAGTGAACAGGTGGCGGTTTCCACGAATAGAACAGCAACTTCACAGATACCTAATTATCCAAATCTTGCTTCTCAGTTGTTGTGCCAAGTTCACAATGTTACCCTGCATGCAGATAAGGAGACAGATGAGATCTATGCGCAAATGAGCCTCCAACCTGTGAATTCTGAGAAAGATGTCTTCCCCATTCCAGATTTTGGGCTGAAGCCTAATAAGCATCCAACTGAGTTCTTTTGCAAAACGTTGACTGCCAGTGATACAAGCACACATGGAGGATTCTCTGTTCCTAGAAGAGCAGCAGAAAAGCTGTTCCCGCCCTTGGATTATTCAATGCAACCTCCAACGCAAGAGCTTGTTGTACGAGACTTGCATGATAATACTTGGACATTCCGTCACATATACCGCGGGCAGCCAAAGCGACATCTTCTCACAACTGGATGGAGCATGTTTGTTGGAGCAAAACGCCTTAGAGCTGGTGACTCTGTTCTATTTATCAGGGATGAGAAATCACAGTTGTTGCTTGGAGTCAGGCGCGCTAACCGTCAGCAAACTTCATTGCCCTCTTCAGTTCTGTCTGCTGATAGTATGCATATTGGAGTACTTGCTGCTGCTGCTCATGCTGCTGCTAATAGAAGCACATTCACAATATTCTACAATCCTAGGGCATGCCCTTCAGAGTTTGTCATTCCTTTGGCCAAATATAGAAAATCTATTTATAACACACAACTGTCTGTTGGTATGAGATTTGGAATGATGTTTGAAACTGAGGAATCGGGTAAACGCAGATATATGGGCACTATTAGCGGAATTAGTGATTTGGATCCACTGAGATGGCCTAGTTCCAAGTGGCGGTGTCTTCAGGTAGAGTGGGATGAGCCTGGATGTGGAGACAAGCAGAATAGAGTTAGTCCATGGGAAGTTGAGACACCAGAAAGTCTCTTCATATTTCCTTCCCTGACTGCAGGCCTCAAACGACCTTACCAGTCTACCTTTTTGGGAGCACAAACTGAGTGGGACAGTTTGATGCAGCACCGCCCTTTCATGCGTGTTCCTGAAAATGTATATGGGGATCTTCAGAGCTCCTCTATCTCAAACCTATGGTCAGAACAGCTAATGAAGATGCTGATAAGACCTCCTCCTGGCCTTACTGGTCTTCAATGCGGTGTTCCCACAGTACAAGACATTAAGGTTGCACTACCTCAGGAAGCTAGGAATGTAGTACAGCCAGCAGGAAACCAAAAACCTGAGCTAATAACTGTAGAAGCTACACCTGCACAAAGTGAAACAAATTCGGAAGTTGTCCTTAATCAACCTGTTGGTGTTGTGAACTCTATTTCTTCACAGCAAGCAACTCTGCAGGCGAAGTCTAAACCTCCGGAAAAAGTAGAAACTGACATTATTGGAAAAAATTCCGAGCCAAGAAAAGAAACTAGTAATTCATCAGTTAAGTTAGATCAGTTTCAGTGTAATGAAGACAAAGTGGCTATCAAGCCTGCAAGTCCCCATGATCTTCCAACTGATGCGAGTGTGACAGCTTCCCACCATAACAGCTTTTCTCAATTACAAGCTAGTCCATGGCTCATTCCTCATAACCCTCAAATTGATTCTGCTGCTTCCAACAATATCCTTCAATGCCCAACTAATAATGAGTGGAATATGTCCTCTCTCCAATCTGCTGCTGGATTGCTCAAATATCCTGTGTCGACCTCCACTTTGACAAAGCATGATAATTCTTTTATGTTGCCTGATACAATTGGTCATGGATTAGCTCCAATAGGCCAGGATTTGTGGGATCATCAGTTGAATGATGTTAAGTGCTTTTCCCAGACAAACCTTCAGGTTCCACTAGACATAACTAACATGCAGTTCCTACCTGATTCTTATGGTTTTAAGGACCTGTCAGAGGAGAGCCATAACCAAAGTGATATATATAGCTGTCTTAACTTTGATAGTAACAGCGGGAGCACAGTGATTGATAATTCTGTTTCGAGCACAGTGTTAGATGAGTTCTGCAATTTGAAGCATACTGATTTCCAGAATCCTTCAGATTTTCTATTAGGCAACATCAGTTCTAGTCAAGATGTTCAATCTCAAATTACATCAGCCAGTCTGGCAGATTCTCAGAATTTCTCTGTACAAGAATTTGCTGACAACTCGGGTGGTGCATCATCAAGCAATGTAAATTTTGATGAATGCAATCTTTTGCAGAATAGCTCATGGCAGCAAGTTGCTCCACGTGTGCGGACATATACAAAGATTCAAAAGACAGGATCTGTAGGAAGATCAATTGATGTCTCTGGTTTCAAAAATTATGAAGAGCTGCGGTCTGAAATTGAAAGAATGTTTGGACTTGAGGGGCTTCTGAATGACACTCGAGGCTCGAGCTGGAAGTTGGTATATGTGGATTTTGAGAATGATGTCCTCCTTGTTGGGGATGATCCTTGGGAGGAATTTGTTGGATGTGTTCGATGCATCAGAATTTTATCGCCTACTGAAGTCCAGCAAATGGGAGAGGAAGGAATGCAGCTACTGAACTCTGCTGGACTGCAAAGCATCAATGGATCAACATCAGAATTCCCAAACTAAGCTCAATACAAGTGATCTATGAGAGCTCACAGTGATTGATCACTAGAGTTGCATGGAGCAACATGCAAATGTAATGTTGTTGAACAACTTAACAAGAAGATGATTCACTAGGTTTCTGTTATAGTAGTGTTGTAATTTATGAGTGTTGATGACTCTGTAAGAAAACAGCTTTAGCATATTAAACTATGCCTTCCACATATTAGAGTTGTTTTCAGCTGCATCTTGTTTGTCTTACAAGGCTGTTTCTTAATGGAGAAAGTTGCTATGACTTGGAAATGAAAGTACAATATCTTGCATTTTTTGTAAGACGGTGATTTCATAGTTTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g081240.2.1SL2.50ch04:65225298..65230282931-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g081240.2SL2.50ch04:65224973..652305075,535-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g081240.2.1.1SL2.50ch04:65230180..65230507328-2
exonexon:Solyc04g081240.2.1.10SL2.50ch04:65227660..6522773576-n/a
exonexon:Solyc04g081240.2.1.11SL2.50ch04:65227418..65227553136-2
exonexon:Solyc04g081240.2.1.12SL2.50ch04:65226086..652273441,259-n/a
exonexon:Solyc04g081240.2.1.13SL2.50ch04:65225596..65225786191-1
exonexon:Solyc04g081240.2.1.14SL2.50ch04:65224973..65225437465-n/a
exonexon:Solyc04g081240.2.1.2SL2.50ch04:65229899..65230014116-n/a
exonexon:Solyc04g081240.2.1.3SL2.50ch04:65229206..6522930499-n/a
exonexon:Solyc04g081240.2.1.4SL2.50ch04:65229032..6522908857-n/a
exonexon:Solyc04g081240.2.1.5SL2.50ch04:65228778..65228930153-n/a
exonexon:Solyc04g081240.2.1.6SL2.50ch04:65228589..6522867385-2
exonexon:Solyc04g081240.2.1.7SL2.50ch04:65228362..6522845291-1
exonexon:Solyc04g081240.2.1.8SL2.50ch04:65228050..65228214165-1
exonexon:Solyc04g081240.2.1.9SL2.50ch04:65227845..65227967123-1
intronintron:Solyc04g081240.2.1.10SL2.50ch04:65227736..65227844n/a-n/a
intronintron:Solyc04g081240.2.1.11SL2.50ch04:65227554..65227659n/a-n/a
intronintron:Solyc04g081240.2.1.12SL2.50ch04:65227345..65227417n/a-n/a
intronintron:Solyc04g081240.2.1.13SL2.50ch04:65225787..65226085n/a-n/a
intronintron:Solyc04g081240.2.1.14SL2.50ch04:65225438..65225595n/a-n/a
intronintron:Solyc04g081240.2.1.2SL2.50ch04:65230015..65230179n/a-n/a
intronintron:Solyc04g081240.2.1.3SL2.50ch04:65229305..65229898n/a-n/a
intronintron:Solyc04g081240.2.1.4SL2.50ch04:65229089..65229205n/a-n/a
intronintron:Solyc04g081240.2.1.5SL2.50ch04:65228931..65229031n/a-n/a
intronintron:Solyc04g081240.2.1.6SL2.50ch04:65228674..65228777n/a-n/a
intronintron:Solyc04g081240.2.1.7SL2.50ch04:65228453..65228588n/a-n/a
intronintron:Solyc04g081240.2.1.8SL2.50ch04:65228215..65228361n/a-n/a
intronintron:Solyc04g081240.2.1.9SL2.50ch04:65227968..65228049n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17809600%2Fdetails feature 17809600
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