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Solanum lycopersicum mRNA Solyc04g081000.2.1

mRNA details  
Name
Solyc04g081000.2.1
Type
mRNA
Length
1,133
Organism
Solanum lycopersicum
Description
MADS box transcription factor (AHRD V1 ***- Q8L5F5_DAUCA); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box
Location(s)
SL2.50ch04:65059948..65063518
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005634
Length
3571
Nb exon
7
Sifter term
GO:0003677
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g081000.2.1 MADS box transcription factor (AHRD V1 ***- Q8L5F5_DAUCA); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box

AGTAACTCCATCTTTCTAAGACTCTTCTCCTCCTCCAATATCTTATCACAAATCAAAATAACAAAAAACATAGAAAAATAAATCAAAATTGCACAATAAAAAGTTAACTTGACCTTCTAGGGTTTGAGTATTCAAGATCTCAAAAAAAAAAAAAGAAGAAGAAGTTATGGCTCGTGGTAAGATCCAGATCAAGAAAATAGAAAACCAAACAAATAGACAAGTGACTTATTCAAAGAGAAGAAATGGGCTATTCAAGAAGGCTAATGAACTTACTGTTCTTTGTGATGCTAAAGTTTCAATTGTTATGATTTCTAGTACTGGAAAACTTCATGAGTTTATAAGTCCCTCTATCACGACCAAACAATTGTTCGATCTGTACCAGAAGACTATTGGAGTTGATATTTGGACTACTCACTATGAGAAAATGCAAGAGCAGCTAAGGAAGCTAAAGGATGTGAATAGGAATCTACGAAAAGAGATCAGACAGAGGATGGGAGAAAGCCTAAATGATCTGAACTATGAACAGTTGGAAGAACTCATGGAAAATGTGGACAATTCTCTGAAGCTTATTCGTGAAAGAAAGTTTAAGGTGATTGGCAATCAGATTGAAACTTACAGGAAAAAGGTTAGGAATGTGGAAGAAATAAATAGAAATCTCCTACTTGAATTTGATGCAAGACAAGAGGATCCATATGGTGGATTAGTTGAGCATGATGGAGACTACAATTCCGTGCTTGGATTTCCAACTGGAGGGCCTCGTATATTAGACTTACGCCTTCAACCCAACAACAATTATCATAATCATCTTCACAGTGGAGGTGGCTCTGATATTACTACTTTTGCTCTAGGTTGAGTAGTAATTTTCACCTTATTGTAATATTGTCATACTTTCTAAATAATCACATGCAATGTTTGTTCACTAGACATGCATGAGAGTACTGACTCTTTAGACTATTCTCCTACTTTTGCTTAATCCAGTGTGTTAAAACCTAAAAAAAGAAAAACTATAAGGATGTCAAAAACTCTATTGTTTTTGGATTGAAGTGTTGTGTATCTTCTAATGTTTAATGTAATGTTTTAGTACTATCTTATATATATAAAGATCATGTGGAAGTATGGAAATGTTTTAACTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g081000.2.1SL2.50ch04:65060113..65063238229+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g081000.2SL2.50ch04:65059948..650635183,571+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g081000.2.1.1SL2.50ch04:65059948..65060301354+n/a
exonexon:Solyc04g081000.2.1.2SL2.50ch04:65060391..6506045767+n/a
exonexon:Solyc04g081000.2.1.3SL2.50ch04:65060962..6506102362+1
exonexon:Solyc04g081000.2.1.4SL2.50ch04:65061152..65061251100+n/a
exonexon:Solyc04g081000.2.1.5SL2.50ch04:65062054..6506209542+1
exonexon:Solyc04g081000.2.1.6SL2.50ch04:65062239..6506228345+n/a
exonexon:Solyc04g081000.2.1.7SL2.50ch04:65063056..65063518463+n/a
intronintron:Solyc04g081000.2.1.1SL2.50ch04:65060302..65060390n/a+n/a
intronintron:Solyc04g081000.2.1.2SL2.50ch04:65060458..65060961n/a+n/a
intronintron:Solyc04g081000.2.1.3SL2.50ch04:65061024..65061151n/a+n/a
intronintron:Solyc04g081000.2.1.4SL2.50ch04:65061252..65062053n/a+n/a
intronintron:Solyc04g081000.2.1.5SL2.50ch04:65062096..65062238n/a+n/a
intronintron:Solyc04g081000.2.1.6SL2.50ch04:65062284..65063055n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17809374%2Fdetails feature 17809374
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