Solanum lycopersicum mRNA Solyc04g080240.2.1

mRNA details  
Name
Solyc04g080240.2.1
Type
mRNA
Length
5,548
Organism
Solanum lycopersicum
Description
PERQ amino acid-rich with GYF domain-containing protein 2 (AHRD V1 *-*- PERQ2_MOUSE); contains Interpro domain(s) IPR003169 GYF
Location(s)
SL2.50ch04:64479941..64489818
GFF source
ITAG_eugene
From BOGAS
1
Length
9878
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g080240.2.1 PERQ amino acid-rich with GYF domain-containing protein 2 (AHRD V1 *-*- PERQ2_MOUSE); contains Interpro domain(s) IPR003169 GYF

CTTCTTCTCCCCTTCTTCCCTCCTCTCACAAAGCAGCATAAATTAGGGTTTTCTTTGAGCGCTTATTCACTTTTTCTCCTTCCGATCATCAGCCATGGGTGACAAAACGCAATTTGATTCTCGCCATAGTCAGATCTCCAAAGATGTGCAAGGACCCAACGATTCCATTCCGCTTTCACCGCAGTGGCTCCTGCCAAAACCAGGGGAAAGTAAGGCTGGGATGGTCACCGGGGACAACCATCTCAATGCACATCCGGGGTATCCTATTCGTTCAGAGTTAGCAAAATTTCCTGGGATGAGTGAAGATATGCATGATAATCAAAAGAAGAAAGATGTGTTTAGGCCATCTGTGCTCGATATGGAATCAGGTCGACGGGATCGCTGGCGTGATGAAGAAAGGGACACCAATTCTGCTGTTCGAAGGGATCGCTGGAGGGAGGGAGATAAGGAGATTGGTGATGGCCGCAAGGTGGAGCGCTGGTCGGACTCCTCTGGCAGACATCATGGAGAAGTACGACGTGGTCCAGGTGAAAGATGGACCGATTCTGGAAATAGGGATAGCAATCACGATCAGCGTCGAGAGAGCAAATGGAACACGCGCTGGGGACCTGATGAGAAGGAGGCAGATGCTGTGCGTGAGAAATGGAGCAACCCTAGCAAAGATGCTGAAATGCATCTTGAGAAGGGGTCGCCAGGTCTTGCCTATCATGGAAAGGATGATAGAGAGGGTGACCACTATCGGCCATGGAGATCTACGTCTCACGGCCGAGGAAGGTCTGAACCTACTCATCAGACTTTTACTCCAAACAAACAAGTTCCTACATTTTCTCATGGCCGGGGACGTGAAGATGGTGCTACCCCTACTTTTTCTCTTGGTAGGGGTCGTGCTGTCTCTGGAGGGAGCCCCATGATTAAAGGCTCTCTTCATGTGCAGTCAGTCGGGGCATTCTCGGAGAAAGCTGAAAGTGTTTCCTCTCCTATACGATACAGTCGGTTAAAAATGCTTGATGTGTACAGAGGGACGGACATGCAGTCCTGTAGCAACTTTTCGGATGTGATTGTGCAAGTTCCTTCACTTACACAAGATGAACCTCTGGAGCCTCTCGCATTATGTGCACCCAGTCAGGAGGAATTGGCTATCTTGAAGGGAATTGACAAGGGGGATGTTCTGAGTAGTGGAGCTCCACAGACTACTAAAGATGGAACATTAGCTCGAAACTCAACTGAACATACTCAACCAAGGCGCGGCAAACTAGGTAGCAGAGAAGATTTATCTTTTGATGATTCAAGAGAAGAAAGTACCGACAATGCCAAAGTTTCAGTAGAGGACAGTATTCTTCATAGAGAATGGGAGTCTGTCAATAGAGATCCAAGCACACCAGGACACTCACCTGTTCCTCATGGTGGCGGCTTATGGCGATCCTCTTCAATTGGTGCACGTTCACATCTGCCGGCTAATGATGCTAGAGATTTGCCAACGGATATCAGGTCAAGAACATCTGATATTGGATGGCTACAGAGCCAGAAAGATAAGAATACTGATCGGGAAAGAGATCTTACAGATCCTTCTTACACCAAAAACGAAGGATCTAAATGGCAGTTTGGGGATGATCCTATTCTGAAAAGGCAATTATCTGCTGCTATGGACAAAGAGTTGGAGATGAGGAAAATTTCACAGTCATCTCCGGAAGACCTAGTTCTATATTACAAAGATCCACAAGGTGCAATTCAAGGTCCTTTCTCAGGTAGTGATATTATTGGATGGTTTGAGGCTGGATATTTTGGTATTGATTTGCTAGTTCGATTAGCTGCTGCACCACATGATTCACCATTTTATCTGCTGGGGGATGTTATGCCCCACTTGCGTGCTAAGGCTCGGCCACCACCTGGATTTGGAGCGCCAAAGCCAAATGCAGATGCTCCAGGGGGTTTGAATGCGAGCAGCTTCACTAAACTTCATGCAGGTTCAAGTGAGATTGATACGGTAAATAGTGAAATGAATTACAAGCATAACTCAACAGAGGCTGAAAATAGATTTTTGGAGTCACTGATGGCTGGCAAAGTAGGCCATGCACCGCTTGACAAGTTTTCTCAGTCTGAAGGCATTCCAGCTTATGGTGCAAATAGCATTGGTGCTGTTCCTCCTATGGGAGCTGAAAGTGGAGAAAATCTGTTTCTCTTGGCTAAAAAAATGGCTCTTGAGAGACAGAAATCTCTACCAAAGCCTTTTCCTCTTTGGCCTGGGAGAGATGCATCACCTGTTGTTCCAAATGCGGATATTGTTCAGGATCCTTTGCCTCATTCTCAACGGCCTTCAATGGCTGAAAATATTCGTCAGCAGTCCCATAATCAGAATGTTGATTTGATGTCTCTACTTCAGGGCATACCAGACAGATCAGCTGGCATTAGTAGCGGCATTAGTGGTTGGTCTAATTTCTCCGTCCAAGGGGGATTAGAACCGCTTCAGGAAAGGATGGAGATGCATCAAGGTCAGAGTATGCCCCCACAATCTGCATTTGGAATGCAACAACAGAGGCTACACCCACAGAATCCACCTATGACCAACTTACTAGGTGCCATGGATAATACTTCCAGCATTTTGGCTACTGAAAAGCTACTTTCATCTGGAGTTCAAGATCCACAGCTGTTAAATCTATTGCAACAACAGTACTTGCTGCAGCTACAGTCTCAGGCAGGACAAGGACCGCAACAATTGTCAGTGTTAGACAAGTTGTTGATGCTCAAGCAGCAGCAGCAGAAACATGAAGAACAGCAACTAATATTGCGCCAGCAGCAGCAGTTGCTCTCTCAAGTGCTGTCTGATCAGCATCCTCATCAGCGATTTGGTGAACAACCTTATGGCAAGTTGCCGAATCCTGGCATATCTGCAGGAAATGCTTCTATGGATCCTAATCATTTCCCGCCTTCACATAATTTGTTTCCAGTGAATACACAAATACAACTTCCTGTTATGGAAGAAGCTCATCCCTTAAATTTCGCCTTGCCCTCGAGCATTTCTCAGGATGTCTGCCAAATAGGTAGCTCTGAGACCTCAAAAGTGCACTTGCCACATCAAATGTTTGGAGATTCTTCCAGTCAAAGGAGTTGGGGTTTAGTGGAACAAATTGATGATATTCAACTGAAGGTCCCAGGGATGGCAACAGCCATGATTGATCCATCATCACATACAGAATTTACCAGCAAACATCACCTAGAGAAGGGCTCTGAAAACAATGAACCTCCAGCCACCACTTCTGAAATTGCCTCTCATTTTCCACATGTAGAGCTGTTAGAAAAGGCAGCTATGCCACCACCACCAGCTGTTGATAATGACTTGCATCAGAAAAACAGGGTTGAATCACCACCAGCTGCAGCTCCCTCAGAACCACAGATTGAAGGAGATTTACATGATGGGCTGTCTGACACTAAGGAACTGAAAAGTGTTGAAACCCGAGAAGTTAAAAAATCATCTGAAAAGAAGTCCAGGAAGCAAAAGTCCACTAAGGGGCAAACTTCGGACTTAGCAAAGGGAGCTTCTAAGTCACAGCCATCAAAGCCCTTACAATCTGATGCTCCAATTGTTTCTGATTCACCATCTGTTTCAGTCGATAAAGCTACAGCTGTAGGTCCAGGAAGAAGAGAGAGCAGACCCGAAGTTGCTATTGCTGATGTTGTGGATGAATATCCAGGGCAAAACCCACCAATTTCACAGTCCAACACCCAAGTACAGTCTGGACAGCGAGCTTGGAAACCTGCTCCTGGTTTCAAGCCGAAGTCATTGTTGGAAATTCAAGAGGAAGAGCAGAGGAGAGCACAAGCAGAAATAACTACTACAGAGGTCGCCACATCTCTGAGCTCCTTAAGTGTGTCTACTCCATGGGCTGGATTTGTTACTAATTCAGATCATAAATTAGTTAGAGATACTCAGCAAGATGCTGCCAGCACTGATTTGAATATGAATAACTCAGATGTTTCTCTCGACCAGAAGACTAAGAAAAGTCAATTGCATGACGTACTGGCTGAGAACACTTTGGCCAAGTCAAGCGATAGAGAGAGAGATTTTCCTGATATGACATCTGTTCAACCTTCCGTGTCTGTCAATGATGATGACAACTTTATTGAAGCTAAAGAAACTAAAAAGAGCCGCAAAAGATCTGCAAAATCTAAGGGAGCAGGAGCAAAGGCCTCAATGCCCACAGCTGCTTCCGAGGTGTCTGTTGCATCAAGTCCTATTGACAAAGTCAAAAGCTTGCGTCAGGTACAACCTGACCAGGAAGTATTACCTGCTATACCATCTGGTCCTTCGCTAGGAGATTTTGTTGTTTGGAAGGGTGAGTCTGCAAGTTCTGCTACTATTCCTGTTCCAGCATGGTCCACCGACTCTGGGAAACCCTCAAAACCCACATCCTTGCGGGACATCCTAAAGGAACAAGAAAAGAAGGTTACTTCTGGACAGCAGCATATACCAGTGCCAACACAGAAATCTGTGCCAAATCCACCTGCGAGAGTAGGTGGTTCATCATGGTCTAGTTCATCGCCCGCCAAGGCTGCATCTCCTATTCAGATTAACTCACAAGCTGGCGCTTATTCAAAAAATAAAGTGGAGGACGATTTGTTTTGGGGCCCAATAGATCATCCCAAGCAAGAGTCAAAGCAATCTGAATATCCTCAGCTTGGAAGTCAAGGCAGTTGGGGAAGCAAGACCACACCAGTGAAAGGAAGTCCTGGTGGTTCATTGAGCAGGCAAAAGTCTGTCAGCAGTAAGCCTGCAGAACGTCTACTATCCTCATCTCCTGCGTCAGGTCACTCGTCCCTGAAAGGGAAGAAGGATGCTTTGACAAAGCATTCAGAAGCAATGGATTTCAGAGAATGGTGTGAGAATGAATGTGATAGGCTCATTGGTACAAGAGATACCAGCTTTCTGGACTTCTGTTTCAAGCAATCCAAGTCAGAGGCTGAAATGCTTCTGATAGAGAATCTTGGCTCTTATGATCCTGATCATGAATTCATTGACAAGTTCCTCAACTACAAAGACTTTTTGCCTGCGGATGTTTTTGACATGGCCTTCCAGGGTCGTAATGATCGTAAGGTCACTGGTGCAAGTGCCAAAAATGTGACTTCTAACAGTGTTGGCTTTGACCAGGGCAACTCAAGTGTTCAGGATTGGGCCTCAAAGGGAGGAAAGAAGAAGGGTAAGAAGGGCAAGAAGGTTAACCTTTCAGAGTTGGGCTTCAATGTGGTTAGCAACCGGATAATGATGGGAGAGATTCAGACTGTAGAAGATTAGGTAGAATGAGGGAGGGTACATACTTTGTGTTTGAGAATGTTTGTAAATGCTTTAGGATTATCCAGCAACAGAAGCAGTACTATTTAATCTGCTCAAAGCAATTTTTGTGATACTATTTCTGACTTTAGGTCTTCTAAATCAGATTCAATCAGAATTAAACCTAGAGCTCTTTTTCATGTTTGTCCTCCACCCTTTTTTGTTTTGTAATACTCAACGTTGTAATGCATCCTGAGAGAGATGCTTTAGCTGAGGTGGGTTCAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g080240.2.1SL2.50ch04:64480201..644897241,731-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g080240.2SL2.50ch04:64479941..644898189,878-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g080240.2.1.1SL2.50ch04:64489676..64489818143-2
exonexon:Solyc04g080240.2.1.10SL2.50ch04:64479941..64480578638-n/a
exonexon:Solyc04g080240.2.1.2SL2.50ch04:64486636..6448672489-n/a
exonexon:Solyc04g080240.2.1.3SL2.50ch04:64485545..64486447903-n/a
exonexon:Solyc04g080240.2.1.4SL2.50ch04:64485322..64485442121-2
exonexon:Solyc04g080240.2.1.5SL2.50ch04:64485145..6448520460-2
exonexon:Solyc04g080240.2.1.6SL2.50ch04:64483943..64484728786-2
exonexon:Solyc04g080240.2.1.7SL2.50ch04:64481240..644837932,554-1
exonexon:Solyc04g080240.2.1.8SL2.50ch04:64480957..64481150194-2
exonexon:Solyc04g080240.2.1.9SL2.50ch04:64480793..6448085260-2
intronintron:Solyc04g080240.2.1.10SL2.50ch04:64480579..64480792n/a-n/a
intronintron:Solyc04g080240.2.1.2SL2.50ch04:64486725..64489675n/a-n/a
intronintron:Solyc04g080240.2.1.3SL2.50ch04:64486448..64486635n/a-n/a
intronintron:Solyc04g080240.2.1.4SL2.50ch04:64485443..64485544n/a-n/a
intronintron:Solyc04g080240.2.1.5SL2.50ch04:64485205..64485321n/a-n/a
intronintron:Solyc04g080240.2.1.6SL2.50ch04:64484729..64485144n/a-n/a
intronintron:Solyc04g080240.2.1.7SL2.50ch04:64483794..64483942n/a-n/a
intronintron:Solyc04g080240.2.1.8SL2.50ch04:64481151..64481239n/a-n/a
intronintron:Solyc04g080240.2.1.9SL2.50ch04:64480853..64480956n/a-n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17808468%2Fdetails feature 17808468
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