Solanum lycopersicum mRNA Solyc04g079400.2.1

mRNA details  
Name
Solyc04g079400.2.1
Type
mRNA
Length
2,485
Organism
Solanum lycopersicum
Description
Protein serine/threonine kinase (AHRD V1 *-** D3BP85_POLPA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
Location(s)
SL2.50ch04:63910315..63915179
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006468
Length
4865
Nb exon
11
Sifter term
GO:0016301
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g079400.2.1 Protein serine/threonine kinase (AHRD V1 *-** D3BP85_POLPA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase

AAGAAATCGTGTTTCTGACTTGTAACAACAAATTATAATCATCCTTCTTTTTCACTTAAGAAACATTCAAACATTGACGAAAAGTTTTCTCTTTCAATGCATTAAAATCCCATTACTCATTCAGTTCTGTGTAATCTCATTTTCTTTTCTTTTTTTCTCTCTGTATTTGTTTGCCATGAAAAATGCCGTCTTTATGGAAAGCATTTTCACTATCTTCAAGCTCTCAACACTCTTCTTCTTCTTCCAGTAGCACTTCTTCTCCGGCCGATTCACCGAATACCCGGCGGATTTACGGCGGTGGAAGGAAGCTTACTAGGCAGAGGAAGTTGAGACATGTTAGTGATGATGATCTTGGTTTACGGAGACCTAATATTCAGGCACTGATTATTGATGAACGTTCAAAGTCTTTGCCGGGTTCTCCTGATTCTTACGCTGATTTCGGGTCGGGTTCTAGGTTGTCTCACCAGCTCCGTCACTGTTCTAATTCCTCTGCTGTGCCACTGCCGTTGCCGCTCCCGGAGCTCAATTCTCTGCCTAAACAGAACTCGGTTCACTCTAATTTGCCGGTTAGAGTTGACAGGGAGCTTTTAAGTCCTCCTCTTGCCAGGGAAACTTTTGATCGAACTCCAGCTGAGGTGAAAAGTTCTCAGCATCCAAGGTCATCTACTCCAACTTATCGGCGTAGGGGTTTCCCTCAGGATCTGAACGCCGAGGGTGTTGAATTCAGGTTGAACGTTCCTGCTAGAAGTGCCCCAAGTAGTGGTTTTACAAGCCCTGTCCGAAGCCCAAAAAGGTTTAGCACGCAGGACCTTTTTCATCATCCATTGCATCAGGCCTCATCATCACCTTCAGAGGCTTACGCTTTCCAACTTTCACCCACAAGGGTTATAAATAGCGCTGATCATTCTCCAGTGAGTAGCCCAATTTTACCAAGTTCAGCTAACAGAATCAGGAACAGCAAAAGTGTTGCTTTGCATTCACATCATAAATCTCTTCCGGAAAGTTCTCTAGGTTGGAATGAAGCTAACAACAACAATGTGCATCCACTACCCCTTCCACCAGGAGTTCCACGACAACCAGAATTATGTACCATGCACAGCAATATGGATAAACCTTGTGTATCACCAACAAAGGGTCAATGGCTAAAGGGGAAGCTTTTAGGTCGTGGTACATATGGAAGTGTATATGAAGCTACCAACCGTGAAACCGGTGCTTTATGTGCAATGAAAGAAGTTGATCTTACTCCTGATGATCCTAAATCTGCTGAATGTATAAAGCAGTTAGAACAGGAAATAAGAGTTCTCAGGCAGTTGAAGCACCAAAATATTGTTCAATATTATGGCAGTGAAATAATGGAAGACCGCTTTTGCATATATTTGGAATATGTGCACCCCGGTTCAATTAATAAGTACGTTCGGGAACATTGCGGAGCTATGACAGAGTCAATAGTTCGAAACTTTACTAGGCATATTGTATCAGGGTTGGCTTACTTGCATAGCACTAAAACAATACACAGGGACATTAAGGGAGCAAATTTGCTTGTAGATGCATCTGGTGTTGTCAAGCTTGCAGATTTTGGGTTAGCAAAACATCTTTCAAGCTGTGCGACTGATCTTTCTCTGAAAGGGAGCCCTCACTGGATGGCTCCAGAGGTAATGCAGGCTGTTTTGCGCAAAGATGCCAATCCAGAGCTTGCCTTAGCTGTTGATATATGGAGCCTGGGCTGTACTGTTATTGAGATGTTTACTGGACAGCCCCCTTGGGGCGAACTTAGTTGGGTGCAAGCAATGTTCGGTGTCTTGAACAAATCACCACCTATACCAGAAAAATTATCATCAGAAGGAAAGGATTTCCTTCAGTGCTGCTTTCGGAGGAAACCTGCAGATAGGCCATCAGCTATGACGCTACTTGAACATGCTTTTTTACGTAGTACTAGTTCCCTTGAGCATAGTATCAATGTTGCTGGTTGCTCAGAGGATTCTCCGGGGAAGAAATTCCATGATACCCTGAGTCCTAAGAACCCAATCAACCCCAAAAAGGAACAAAAACCACTGTTACCAGGAACATCTGGCAGGCAAGCAAAATCACCATGTAGCAGTGAAACTTGCCGGCAAACTCAACCTGAAACCTGTGAATATGGAGCAACTTCTCACCATTCTCCACGTTCTGCACTTGAAGTCTTTCCCTGTATTACTTCAATGGAGCTGAACTCGAGTTCACGTGCAGCCAGCCCCTCAAGCGTTCCTAGTAGCTTTCGCCTGGGACCTGAAAACAGAAGTCCTTATAGAATCATAGGGAAGGAAATTCCAAACCTCTGTATAAGATCATAAATGAATGGAGAGGAGGGAAATTCATGTACAGATCAGGAGAATTAGATACAGAAAACTTCAGTTGGATGATTAGTCAAAATGTTGCCATATGTAATATTCATGTTGTATTTGAAGGCATACATATCTTTATAACATATTCATGAAGAATTGAAGAT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g079400.2.1SL2.50ch04:63910469..63914997716-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g079400.2SL2.50ch04:63910315..639151794,865-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g079400.2.1.1SL2.50ch04:63914573..63915179607-1
exonexon:Solyc04g079400.2.1.10SL2.50ch04:63910868..6391096598-1
exonexon:Solyc04g079400.2.1.11SL2.50ch04:63910315..63910701387-n/a
exonexon:Solyc04g079400.2.1.2SL2.50ch04:63913266..63913859594-1
exonexon:Solyc04g079400.2.1.3SL2.50ch04:63913100..6391318788-n/a
exonexon:Solyc04g079400.2.1.4SL2.50ch04:63912528..6391259063-n/a
exonexon:Solyc04g079400.2.1.5SL2.50ch04:63912284..63912447164-1
exonexon:Solyc04g079400.2.1.6SL2.50ch04:63912010..6391208576-n/a
exonexon:Solyc04g079400.2.1.7SL2.50ch04:63911774..6391183360-n/a
exonexon:Solyc04g079400.2.1.8SL2.50ch04:63911540..63911665126-n/a
exonexon:Solyc04g079400.2.1.9SL2.50ch04:63911093..63911314222-n/a
intronintron:Solyc04g079400.2.1.10SL2.50ch04:63910966..63911092n/a-n/a
intronintron:Solyc04g079400.2.1.11SL2.50ch04:63910702..63910867n/a-n/a
intronintron:Solyc04g079400.2.1.2SL2.50ch04:63913860..63914572n/a-n/a
intronintron:Solyc04g079400.2.1.3SL2.50ch04:63913188..63913265n/a-n/a
intronintron:Solyc04g079400.2.1.4SL2.50ch04:63912591..63913099n/a-n/a
intronintron:Solyc04g079400.2.1.5SL2.50ch04:63912448..63912527n/a-n/a
intronintron:Solyc04g079400.2.1.6SL2.50ch04:63912086..63912283n/a-n/a
intronintron:Solyc04g079400.2.1.7SL2.50ch04:63911834..63912009n/a-n/a
intronintron:Solyc04g079400.2.1.8SL2.50ch04:63911666..63911773n/a-n/a
intronintron:Solyc04g079400.2.1.9SL2.50ch04:63911315..63911539n/a-n/a
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Related viewsNone found
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