Solanum lycopersicum mRNA Solyc04g079070.2.1
 mRNA details
|
| Name | Type |
Length
1,581
|
Organism |
|
Description
Serine carboxypeptidase 1 (AHRD V1 ***- B6TC80_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase
|
|
Location(s)
SL2.50ch04:63651692..63657258
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0006508
- Length
- 5567
- Nb exon
- 14
- Sifter term
- GO:0005515
- GO:0016754
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc04g079070.2.1 Serine carboxypeptidase 1 (AHRD V1 ***- B6TC80_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase
TTCATTAAAATTTTTGGTAAAATGAGTAGCAATAATTTGTTGCTTCTTCTTCTCCATCTTCTTCTTCTTCAACAAGAAGTTACTTCACATTCCCTTGTTGAGTATCTTCCCGGTTTGCAAGGTCGCCTCCCATTCCATCTAGAGACCGGGTATGTTGGTATTGGCAAAGATAATGAGTTGCAACATTTTTACTATTTTTTGGCATCAGAATCTGAGCCTACTACTAATCCTCTTTTAATTTGGCTAACGGGTGGACCTGGTTGTTCTTCACTTAGTGCTATTGTCAATGAAATAGGGCCATTGCGTTTTGCTGAACTCTACAATGGAAGTTTGCCCACGTTCGAACTAAACCCACATGCATTGACCAAGATAGCAAGTGTGATATTTTTGGATCAACCAGTAAACACTGGATTCTCATATGCAACAAATGATGCTGCATACAAATACACTGATATACAAGCATGTGAATATGTTGATGAATTTCTAAGAAAGTGGCTTGATGATCATCCACAATTCATCTCAAATCCATTTTACGTTGCTGGAAACTCATATTCTGGAATGACTATTCCAGTTATAACACAATTGATATCAAATAGAAATGCAGAAGGCAAAGAGCCATTGATTAATCTTCAGGGATATTTACTTGGCAATCCCTTAACGTTTTCTCAAGAAAAGAATTATCATATACCTTTTAGCCATGGCATGGGACTTATATCTGATGAGCTTTATAAGTCATTGGAGAAGAATTGTAAAGGAGAATATACATACATGGATCCCAAAAATACGAGGTGTGCAAGTGAAGTTCGTACTTTCAATCAGATGATAAGCAACATCAATACGAAACGTATTCTAAGGCCCAATTGCGAAGAAGACCCACGTAAAAGGTCGGGTCAAAGAAGATTACTTGGTCATAAACTCATCTCCTTGCAACGTGGCGACCCGTGTGCGTTTGATTGGCGTAAGCTTGTAAAGTACTGGGCTAATGACCCTAAAGTCCAAGAAGCTCTTCATGTTCGCAAGGGAATTATAGGAAGTTGGATGAGATGTAGGAGAAATATATCTATGAGCTCTGGTAATTATACAATCACGTTAAATAATGTTATACCCTATCATGCAAACCTAAGTACTAAAGGTTATCGATCACTCATATATAGTGGCGATCATGACTATATAATCCCTTTTCAATCGACACAAGCATGGATAAAGTCTCTAAACTACACTATTGATGATGATTGGCGTCCATGGAACGTAAATAATCAAGTTTCTGGTTATACGAGGTCTTACTCCAACAAAATGACTTATGCAACAGTGAAGGGAGCAGGACACACAGCTTGTACGGACAAACCTGAAGAATGTTTTGTTATGTTCAAAAGATGGATAAGTGATGATCCTTTATAAATTGTCCTCAATTTCATCTATATATCTTCTCTCTATTTTTATTTTATTTTACTGAAAAATAATCTTTTCTTAACTTTACCAACTTTAGTTGTGTTTGTGAACAAAATCTTTCCCTGTTCTGATTTTACATGTCACTTGGAAGAGGGGCTGAAGATGGAATTAAAATCTTGTAATGCAACTAAT
TTCATTAAAATTTTTGGTAAAATGAGTAGCAATAATTTGTTGCTTCTTCTTCTCCATCTTCTTCTTCTTCAACAAGAAGTTACTTCACATTCCCTTGTTGAGTATCTTCCCGGTTTGCAAGGTCGCCTCCCATTCCATCTAGAGACCGGGTATGTTGGTATTGGCAAAGATAATGAGTTGCAACATTTTTACTATTTTTTGGCATCAGAATCTGAGCCTACTACTAATCCTCTTTTAATTTGGCTAACGGGTGGACCTGGTTGTTCTTCACTTAGTGCTATTGTCAATGAAATAGGGCCATTGCGTTTTGCTGAACTCTACAATGGAAGTTTGCCCACGTTCGAACTAAACCCACATGCATTGACCAAGATAGCAAGTGTGATATTTTTGGATCAACCAGTAAACACTGGATTCTCATATGCAACAAATGATGCTGCATACAAATACACTGATATACAAGCATGTGAATATGTTGATGAATTTCTAAGAAAGTGGCTTGATGATCATCCACAATTCATCTCAAATCCATTTTACGTTGCTGGAAACTCATATTCTGGAATGACTATTCCAGTTATAACACAATTGATATCAAATAGAAATGCAGAAGGCAAAGAGCCATTGATTAATCTTCAGGGATATTTACTTGGCAATCCCTTAACGTTTTCTCAAGAAAAGAATTATCATATACCTTTTAGCCATGGCATGGGACTTATATCTGATGAGCTTTATAAGTCATTGGAGAAGAATTGTAAAGGAGAATATACATACATGGATCCCAAAAATACGAGGTGTGCAAGTGAAGTTCGTACTTTCAATCAGATGATAAGCAACATCAATACGAAACGTATTCTAAGGCCCAATTGCGAAGAAGACCCACGTAAAAGGTCGGGTCAAAGAAGATTACTTGGTCATAAACTCATCTCCTTGCAACGTGGCGACCCGTGTGCGTTTGATTGGCGTAAGCTTGTAAAGTACTGGGCTAATGACCCTAAAGTCCAAGAAGCTCTTCATGTTCGCAAGGGAATTATAGGAAGTTGGATGAGATGTAGGAGAAATATATCTATGAGCTCTGGTAATTATACAATCACGTTAAATAATGTTATACCCTATCATGCAAACCTAAGTACTAAAGGTTATCGATCACTCATATATAGTGGCGATCATGACTATATAATCCCTTTTCAATCGACACAAGCATGGATAAAGTCTCTAAACTACACTATTGATGATGATTGGCGTCCATGGAACGTAAATAATCAAGTTTCTGGTTATACGAGGTCTTACTCCAACAAAATGACTTATGCAACAGTGAAGGGAGCAGGACACACAGCTTGTACGGACAAACCTGAAGAATGTTTTGTTATGTTCAAAAGATGGATAAGTGATGATCCTTTATAAATTGTCCTCAATTTCATCTATATATCTTCTCTCTATTTTTATTTTATTTTACTGAAAAATAATCTTTTCTTAACTTTACCAACTTTAGTTGTGTTTGTGAACAAAATCTTTCCCTGTTCTGATTTTACATGTCACTTGGAAGAGGGGCTGAAGATGGAATTAAAATCTTGTAATGCAACTAAT
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc04g079070.2.1 | SL2.50ch04:63651874..63657237 | 459 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc04g079070.2 | SL2.50ch04:63651692..63657258 | 5,567 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc04g079070.2.1.1 | SL2.50ch04:63657110..63657258 | 149 | - | 1 |
| exon | exon:Solyc04g079070.2.1.10 | SL2.50ch04:63652722..63652793 | 72 | - | n/a |
| exon | exon:Solyc04g079070.2.1.11 | SL2.50ch04:63652468..63652601 | 134 | - | 1 |
| exon | exon:Solyc04g079070.2.1.12 | SL2.50ch04:63652259..63652372 | 114 | - | 1 |
| exon | exon:Solyc04g079070.2.1.13 | SL2.50ch04:63652100..63652145 | 46 | - | n/a |
| exon | exon:Solyc04g079070.2.1.14 | SL2.50ch04:63651692..63651958 | 267 | - | n/a |
| exon | exon:Solyc04g079070.2.1.2 | SL2.50ch04:63656247..63656392 | 146 | - | 2 |
| exon | exon:Solyc04g079070.2.1.3 | SL2.50ch04:63655679..63655752 | 74 | - | n/a |
| exon | exon:Solyc04g079070.2.1.4 | SL2.50ch04:63654574..63654696 | 123 | - | n/a |
| exon | exon:Solyc04g079070.2.1.5 | SL2.50ch04:63654379..63654481 | 103 | - | 2 |
| exon | exon:Solyc04g079070.2.1.6 | SL2.50ch04:63654211..63654248 | 38 | - | n/a |
| exon | exon:Solyc04g079070.2.1.7 | SL2.50ch04:63654002..63654100 | 99 | - | n/a |
| exon | exon:Solyc04g079070.2.1.8 | SL2.50ch04:63653840..63653926 | 87 | - | n/a |
| exon | exon:Solyc04g079070.2.1.9 | SL2.50ch04:63653556..63653684 | 129 | - | n/a |
| intron | intron:Solyc04g079070.2.1.10 | SL2.50ch04:63652794..63653555 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.11 | SL2.50ch04:63652602..63652721 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.12 | SL2.50ch04:63652373..63652467 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.13 | SL2.50ch04:63652146..63652258 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.14 | SL2.50ch04:63651959..63652099 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.2 | SL2.50ch04:63656393..63657109 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.3 | SL2.50ch04:63655753..63656246 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.4 | SL2.50ch04:63654697..63655678 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.5 | SL2.50ch04:63654482..63654573 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.6 | SL2.50ch04:63654249..63654378 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.7 | SL2.50ch04:63654101..63654210 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.8 | SL2.50ch04:63653927..63654001 | n/a | - | n/a |
| intron | intron:Solyc04g079070.2.1.9 | SL2.50ch04:63653685..63653839 | n/a | - | n/a |
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