Solanum lycopersicum mRNA Solyc04g077630.2.1
 mRNA details
|
| Name | Type |
Length
1,720
|
Organism |
|
Description
Serine carboxypeptidase 1 (AHRD V1 ***- B6TC80_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase
|
|
Location(s)
SL2.50ch04:62577650..62580723
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0006508
- Length
- 3074
- Nb exon
- 14
- Sifter term
- GO:0016754
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc04g077630.2.1 Serine carboxypeptidase 1 (AHRD V1 ***- B6TC80_MAIZE); contains Interpro domain(s) IPR001563 Peptidase S10, serine carboxypeptidase
ACACATTGCAGCTGGAGATAGAATAGTATGTTGGATGAAAAACATGGAAAAGATACAACTATACTATTATTTGTTTTTACTTGTTGTTGTAGCAGACCATGCAGCAGCTAGTACACAAGTGAAGTTTCTTCCAGGTTTTGAAGGACCACTTCCTTTTCAACTCGAAACTGGGTATGTCGGAGTTGGTGATTCAGAAATTGTGCAATTATTCTATTATTTTATAGAGTCGGAGTCTGATCCAGACTCCGACCCTCTTATGCTTTGGATCACTGGAGGCCCTGGTTGCTCTGCTTTATCTGGCCTTATCTATGAGATAGGACCAATAACATTTGAACCAGTAGAATACAATGGGAGTTTTCCTAAAATGATACTAAATCCCTACTCATGGACAAAGGTGTCAAGTATTATTTTCTTAGACTTATCGGTGGGAACTGGATTTTCCTATGCAACGACTCTAGCAGCTCGACAATCATCTGATTTACAAGCGAGTGATCATGCATATCAGTTCCTTCGCAAGTGGTTTGTCGATCATCCAGAATTCTTAAAGAATCCATTTTATGTTGGTGGAGATTCATATTCAGGCATTGTTGTTCCCATCATTACTCAAATTATAGCAATTAAGAATGAAATGGAAGTCGAACTATTTATTAATCTTAAGGTTTGTCCTTTTTCTTACCAACTCATAACGAAGTTGTTAAAGATACACAAAATGGACGACGCTATTATATATCTTCAGGGATATTTACTCGGAAATCCAGTGACTTTTAAAGATCATGAAGACGATTATAAAATTCCATTTGCTTATGGAATGGGACTTATATCTGAAGAACTCTATGAGTCGTTGAAATCTAGTTGTAAAGGAGAGTATTTCAATATTAATGCAAGCAATGCACCGTGTTTGCAAGATGTTCAAACTTTTAACGAGCTTCTTAAAGGAATTTATAAAGCCCATATTTTGGAGCCCAAATGTAAGCGTTTTTCGCCAAGGCCACACCAATTGTTTGGCGAAAGAAGATCTCTACATCAACTTAACAATCTTCCTGGACTTATAAAATGTCGCGAAAATTGGTACAAACATTCTTATCATTGGGCTGATGATGATCAAGTTAGAGACGCCCTCAACATCCGAAAGAGGAGTACTGGAAAATGGAAGAGATGTGAAAGTAATTTGCAATACAATAGGATGGTCATGAGTAGCATACCATATCATAAAAACCTCAGTAGTAAAGGTTACAGATCTCTTATATACAGTGGAGATCATGACATGATTGTCACTTTTCCATCAACTCAAGCATGGATAAAATCTCTTAACTACTCAATAGTCGATGATTGGCGAGCTTGGACTGTTGACAATCAAGTTGCCCGTTACACAAGAAGTTACTCAAATCAGATGACATTTGCAACAGTGAAGGGAGCAGGGCATACTGCACCAGAATATAAACCTCGTGAATGTCTGGCCATGCTCACAAGGTGGATGTCTTACCAGCTTTTGTAATCAACAAATGTATTGTTGTTTGAAGTGTGGGCTCGATCACATTGTTCGTTTCAAGTCAGATAAATAAAGAGGGTTGTCAAGAATCAATTTGAAACAATTTCTCTACCTTATAAAAGTAAGGAATAGGCTGCGTAGATTTTGTTCTCCCCAATCACCTCCAAATGTTTGATAGAGTCAATTGTATTGAATTCAAATTGATAATTTCTATGTTATGTGTACGCACTA
ACACATTGCAGCTGGAGATAGAATAGTATGTTGGATGAAAAACATGGAAAAGATACAACTATACTATTATTTGTTTTTACTTGTTGTTGTAGCAGACCATGCAGCAGCTAGTACACAAGTGAAGTTTCTTCCAGGTTTTGAAGGACCACTTCCTTTTCAACTCGAAACTGGGTATGTCGGAGTTGGTGATTCAGAAATTGTGCAATTATTCTATTATTTTATAGAGTCGGAGTCTGATCCAGACTCCGACCCTCTTATGCTTTGGATCACTGGAGGCCCTGGTTGCTCTGCTTTATCTGGCCTTATCTATGAGATAGGACCAATAACATTTGAACCAGTAGAATACAATGGGAGTTTTCCTAAAATGATACTAAATCCCTACTCATGGACAAAGGTGTCAAGTATTATTTTCTTAGACTTATCGGTGGGAACTGGATTTTCCTATGCAACGACTCTAGCAGCTCGACAATCATCTGATTTACAAGCGAGTGATCATGCATATCAGTTCCTTCGCAAGTGGTTTGTCGATCATCCAGAATTCTTAAAGAATCCATTTTATGTTGGTGGAGATTCATATTCAGGCATTGTTGTTCCCATCATTACTCAAATTATAGCAATTAAGAATGAAATGGAAGTCGAACTATTTATTAATCTTAAGGTTTGTCCTTTTTCTTACCAACTCATAACGAAGTTGTTAAAGATACACAAAATGGACGACGCTATTATATATCTTCAGGGATATTTACTCGGAAATCCAGTGACTTTTAAAGATCATGAAGACGATTATAAAATTCCATTTGCTTATGGAATGGGACTTATATCTGAAGAACTCTATGAGTCGTTGAAATCTAGTTGTAAAGGAGAGTATTTCAATATTAATGCAAGCAATGCACCGTGTTTGCAAGATGTTCAAACTTTTAACGAGCTTCTTAAAGGAATTTATAAAGCCCATATTTTGGAGCCCAAATGTAAGCGTTTTTCGCCAAGGCCACACCAATTGTTTGGCGAAAGAAGATCTCTACATCAACTTAACAATCTTCCTGGACTTATAAAATGTCGCGAAAATTGGTACAAACATTCTTATCATTGGGCTGATGATGATCAAGTTAGAGACGCCCTCAACATCCGAAAGAGGAGTACTGGAAAATGGAAGAGATGTGAAAGTAATTTGCAATACAATAGGATGGTCATGAGTAGCATACCATATCATAAAAACCTCAGTAGTAAAGGTTACAGATCTCTTATATACAGTGGAGATCATGACATGATTGTCACTTTTCCATCAACTCAAGCATGGATAAAATCTCTTAACTACTCAATAGTCGATGATTGGCGAGCTTGGACTGTTGACAATCAAGTTGCCCGTTACACAAGAAGTTACTCAAATCAGATGACATTTGCAACAGTGAAGGGAGCAGGGCATACTGCACCAGAATATAAACCTCGTGAATGTCTGGCCATGCTCACAAGGTGGATGTCTTACCAGCTTTTGTAATCAACAAATGTATTGTTGTTTGAAGTGTGGGCTCGATCACATTGTTCGTTTCAAGTCAGATAAATAAAGAGGGTTGTCAAGAATCAATTTGAAACAATTTCTCTACCTTATAAAAGTAAGGAATAGGCTGCGTAGATTTTGTTCTCCCCAATCACCTCCAAATGTTTGATAGAGTCAATTGTATTGAATTCAAATTGATAATTTCTATGTTATGTGTACGCACTA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc04g077630.2.1 | SL2.50ch04:62577948..62580498 | 484 | + | n/a |
Add items to a list:
| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc04g077630.2 | SL2.50ch04:62577650..62580723 | 3,074 | + | n/a |
Add items to a list:
| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc04g077630.2.1.1 | SL2.50ch04:62577650..62577666 | 17 | + | n/a |
| exon | exon:Solyc04g077630.2.1.10 | SL2.50ch04:62579652..62579723 | 72 | + | n/a |
| exon | exon:Solyc04g077630.2.1.11 | SL2.50ch04:62579807..62579925 | 119 | + | n/a |
| exon | exon:Solyc04g077630.2.1.12 | SL2.50ch04:62580045..62580158 | 114 | + | n/a |
| exon | exon:Solyc04g077630.2.1.13 | SL2.50ch04:62580271..62580316 | 46 | + | 1 |
| exon | exon:Solyc04g077630.2.1.14 | SL2.50ch04:62580415..62580723 | 309 | + | 1 |
| exon | exon:Solyc04g077630.2.1.2 | SL2.50ch04:62577923..62578076 | 154 | + | n/a |
| exon | exon:Solyc04g077630.2.1.3 | SL2.50ch04:62578167..62578312 | 146 | + | n/a |
| exon | exon:Solyc04g077630.2.1.4 | SL2.50ch04:62578399..62578475 | 77 | + | 1 |
| exon | exon:Solyc04g077630.2.1.5 | SL2.50ch04:62578557..62578679 | 123 | + | 2 |
| exon | exon:Solyc04g077630.2.1.6 | SL2.50ch04:62578750..62578852 | 103 | + | n/a |
| exon | exon:Solyc04g077630.2.1.7 | SL2.50ch04:62578926..62579143 | 218 | + | n/a |
| exon | exon:Solyc04g077630.2.1.8 | SL2.50ch04:62579223..62579309 | 87 | + | 2 |
| exon | exon:Solyc04g077630.2.1.9 | SL2.50ch04:62579400..62579534 | 135 | + | n/a |
| intron | intron:Solyc04g077630.2.1.1 | SL2.50ch04:62577667..62577922 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.10 | SL2.50ch04:62579724..62579806 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.11 | SL2.50ch04:62579926..62580044 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.12 | SL2.50ch04:62580159..62580270 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.13 | SL2.50ch04:62580317..62580414 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.2 | SL2.50ch04:62578077..62578166 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.3 | SL2.50ch04:62578313..62578398 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.4 | SL2.50ch04:62578476..62578556 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.5 | SL2.50ch04:62578680..62578749 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.6 | SL2.50ch04:62578853..62578925 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.7 | SL2.50ch04:62579144..62579222 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.8 | SL2.50ch04:62579310..62579399 | n/a | + | n/a |
| intron | intron:Solyc04g077630.2.1.9 | SL2.50ch04:62579535..62579651 | n/a | + | n/a |
Add items to a list:
| Related views |
| User comments |
Please wait, checking for comments. (If comments do not show up, access them here)
Working
