Solanum lycopersicum mRNA Solyc04g076880.2.1

mRNA details  
Name
Solyc04g076880.2.1
Type
mRNA
Length
2,375
Organism
Solanum lycopersicum
Description
Phosphoenolpyruvate carboxykinase (AHRD V1 **** Q8W505_SOLLC); contains Interpro domain(s) IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising
Location(s)
SL2.50ch04:61816548..61822360
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006094
Length
5813
Nb exon
13
Sifter term
  • GO:0042802
  • GO:0004612
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g076880.2.1 Phosphoenolpyruvate carboxykinase (AHRD V1 **** Q8W505_SOLLC); contains Interpro domain(s) IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising

ACACATCCTTCCATGGTTCAACCTTTTCGCTTAAAATTTTATTCTTCAAATTCAGCTTTTTCAGCTATTCTTCACTGATTCTGAGAAAAGATGGCGTCGAACGGAGTCGGAAATGGAGAATTCAGTTTTGATAACAAGAGGAGGACTGGGCTGCCGAAGATCCAGACACAGAAGACAGAGGATGAAAACGTGGTTTGCCATGACGACAGTGCAACGCCGGTGAAAGCTCAGACGCTGGAGGAATTGCATTCTCTTCAGAAGAAGAAATCGGCGCCGACTACTCCGATCAAGTCCCCTCATGTATTCGGCGTTGCCGTTTCTGAAGAGGAACGACAGAAACAACAGCTGCAATCCATTAGTGCATCATTGGCGTCATTGACACGAGAGACGGGGCCAAAAGTGGTGAAAGGAGACCCAGCAAGGCAAGCGGAGACGCCAAAGGTGCAACAACCTGTTCATCACCACCACACCCCTGCCCTTAACATCAGTGACAGTGGCCTCAAGTTCACCCACATCCTTTATAATCTCTCTCCTGCTGAGTTGTATGAGCAAGCTATCAAGTATGAGAAGGGATCATTCATCACGTCGAGCGGTGCTTTAGCCACACTTTCCGGAGCCAAAACTGGCCGTTCCCCAAGAGACAAACGTGTTGTTAGAGACGAAACCACTGAGGACGACCTTTGGTGGGGAAAGGGTTCACCCAATATCGAAATGGACGAACAGACTTTCTTAATCAACAGAGAAAGAGCTGTTGATTACCTATGCTCTTTGGAGAAGGTGTTTGTGAATGATCAGTTCCTCAACTGGGATCCAAACAATCGTATCAAAGTTAGAATTGTATCTGCCAGAGCCTATCACTCCTTGTTCATGCACAACATGTGTATCCGACCCACTCCAGAAGAGCTGGAGGATTTTGGTACTCCGGACTTCACAATTTACAATGCTGGTCAATTCCCATGTAACCGTTACACCCACTATATGACTTCCTCCACTAGCATAGACATCAATCTTGCTAGGAGGGAAATGGTCATCCTTGGCACACAGTATGCTGGGGAAATGAAGAAAGGTCTTTTCGGGGTAATGCACTATCTAATGCCTAAGCGCCAAATTCTCTCTCTACACTCTGGCTGCAATATGGGAAAAGAAGGAGATGTAGCCCTCTTCTTTGGATTATCAGGAACTGGGAAGACAACACTGTCTACTGATCACAACCGGTACCTGATCGGAGATGATGAACACTGCTGGAGTGATCATGGTGTCTCAAACATTGAAGGAGGTTGCTATGCCAAATGCATAGACCTTGCAAGGGAGAAGGAGCCTGATATCTGGAATGCCATCAAGTTTGGCACTGTGCTGGAAAACGTGGTTTTTGAAGAACATACCCGAGAAGTGGATTATACAGACAAATCTGTAACAGAGAACACCCGGGCAGCATATCCAATTGAATACATCCCAAATGCTAAAATACCATGCGTTGGTCCTCATCCAAAGAATGTCATTCTCCTTGCATGTGATGCATTCGGCGTGCTTCCACCAGTCAGCAAATTGAACTTGGCACAGACAATGTACCACTTCATCAGTGGCTACACAGCTTTGGTGGCAGGAACCGAAGATGGTATTAAGGAGCCTACAGCAACATTTTCAGCATGTTTCGGTGCAGCATTTATCATGCTTCATCCAACCAAATATGCAGCCATGCTGGCTGAGAAGATGCTGAAACATGGAGCTACAGGATGGCTTGTGAACACTGGCTGGTCAGGTGGAAGTTATGGATCAGGCAGCCGAATCAAGTTAGCATACACTAGGAAGATCATCGATGCCATCCACTCCGGCGATCTTCTGAAAGCAGAATACAAGAAGACCGAGGTATTTGGGCTGGAGATTCCAACTGCACTTGAGGGAGTACCTTCCGAGATTCTGGACCCCGTGAACACTTGGCCCGACAAGAAGGCACACAAGGATACCCTGTTGAAGCTGGGAGGCCTATTTAGGAAGAATTTTGAGGTGTTCACAAACTACAAGATTGGAAGTGATAGCAACCTGACTGAGGAGATCCTGGCAGCTGGTCCAAACTTCTAATTGAAGAAGGATTTGCCTGAGTGATGGTTTGGCAAAATATGACTTTAAAATATCAAAAGAGAAAAATAAGATTAGCCAGAAAACATGTGTAATATTATTTTGTGTGTTACATTTTATGTGTTATTGGTCCGGAAGGAGGTTTCACATCCATGAATCTTTGTTCTTTATTCTTGTTTTTATTCCATTTGGGATCGTGTTTGTTTTCTGGTGAGGTTGAGGCGGAGGTTGTTATTGTAACTTTCATTCACTTGTGCTGTAATATTTTCAGTCAATAATGAAAGCTTCATACCCAACTA
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g076880.2.1SL2.50ch04:61816775..61822064663+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g076880.2SL2.50ch04:61816548..618223605,813+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g076880.2.1.1SL2.50ch04:61816548..6181663083+n/a
exonexon:Solyc04g076880.2.1.10SL2.50ch04:61821148..61821326179+2
exonexon:Solyc04g076880.2.1.11SL2.50ch04:61821415..61821584170+2
exonexon:Solyc04g076880.2.1.12SL2.50ch04:61821666..61821834169+n/a
exonexon:Solyc04g076880.2.1.13SL2.50ch04:61821921..61822360440+1
exonexon:Solyc04g076880.2.1.2SL2.50ch04:61816769..61817044276+n/a
exonexon:Solyc04g076880.2.1.3SL2.50ch04:61817671..61817849179+n/a
exonexon:Solyc04g076880.2.1.4SL2.50ch04:61818512..61818665154+1
exonexon:Solyc04g076880.2.1.5SL2.50ch04:61818789..6181887385+2
exonexon:Solyc04g076880.2.1.6SL2.50ch04:61819972..61820072101+1
exonexon:Solyc04g076880.2.1.7SL2.50ch04:61820285..61820583299+n/a
exonexon:Solyc04g076880.2.1.8SL2.50ch04:61820725..61820898174+1
exonexon:Solyc04g076880.2.1.9SL2.50ch04:61820989..6182105466+2
intronintron:Solyc04g076880.2.1.1SL2.50ch04:61816631..61816768n/a+n/a
intronintron:Solyc04g076880.2.1.10SL2.50ch04:61821327..61821414n/a+n/a
intronintron:Solyc04g076880.2.1.11SL2.50ch04:61821585..61821665n/a+n/a
intronintron:Solyc04g076880.2.1.12SL2.50ch04:61821835..61821920n/a+n/a
intronintron:Solyc04g076880.2.1.2SL2.50ch04:61817045..61817670n/a+n/a
intronintron:Solyc04g076880.2.1.3SL2.50ch04:61817850..61818511n/a+n/a
intronintron:Solyc04g076880.2.1.4SL2.50ch04:61818666..61818788n/a+n/a
intronintron:Solyc04g076880.2.1.5SL2.50ch04:61818874..61819971n/a+n/a
intronintron:Solyc04g076880.2.1.6SL2.50ch04:61820073..61820284n/a+n/a
intronintron:Solyc04g076880.2.1.7SL2.50ch04:61820584..61820724n/a+n/a
intronintron:Solyc04g076880.2.1.8SL2.50ch04:61820899..61820988n/a+n/a
intronintron:Solyc04g076880.2.1.9SL2.50ch04:61821055..61821147n/a+n/a
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