Solanum lycopersicum mRNA Solyc04g076480.2.1
 mRNA details
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| Name | Type |
Length
3,073
|
Organism |
|
Description
Serine/threonine-protein kinase B-raf (AHRD V1 *-** BRAF_COTJA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
|
|
Location(s)
SL2.50ch04:61341061..61348995
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| Ontology term(s) |
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GFF source
ITAG_eugene
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- Interpro2go term
- GO:0006468
- Length
- 7935
- Nb exon
- 15
- Sifter term
- GO:0004712
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc04g076480.2.1 Serine/threonine-protein kinase B-raf (AHRD V1 *-** BRAF_COTJA); contains Interpro domain(s) IPR002290 Serine/threonine protein kinase
ATGCCGCATAGAACGACTTACTTTTTTCCAAGGCAATTTCCTGATCGTGGGTTGGATGCATCTGCAAAGTTTGTTAATGATCACGAGAAGGAGAAGGAGAAGAAGATCAGTGACGTTGAAGATCGAAAATCTTCTTCGAAAGAGAGAGATGTTGTCGCGTCGAAACAGCTCATAAGTGATGTGAAAGAGACTGATAACAATAATGATGATGCTACGTTTTCGTACGGGAACCGTGATAAGATTCACGGGAAGCAGTTGGCTGCTTTTGTGAACTGGCTGACTGAGAAAAATAAGAAAGGGAAATCGATACGGAATCACGTGAAGATCAAATTGGATGATGGAGATACAGAGGATGAACATGAACTTTTGCTACCTGTTCCACCTGAAGCTGTACCGATACATGAATTGCAGGTTGATTGCCACGTGGCACCGCTAGAGCAGAAACAGCAGGGGACATTTGATCGGAAAGCTTCATTGCAGAGGTTATCGAGTAGTGGAAGCAATTACAGTTGTGTGGGGAAGCAATTTGAGAGACAAACTTCATTGCAAAGGCTGTCGAGTTGGGGAAGTACTAGTTATGCGGGGAGTTTGTTTTCAGGAACAACGGTGGATGGGAACTGGCCGAGTACGGGAGTTAAAGACACGCAGACGTCGACGACAAGGGAAGTGGAGGAGGAAGTGGTGGGGCAGGATGCGGAGGAGAGAGTTGATAACGAAGATACATTGATACAGAAGTCGAAGGAGAGCTATTACTTGCAGCTGACGCTCGCTAAAAAGCTTGTAGAGCAAGCAATGCTTGCTTCTGGAGAGCCTATTCTTCTGCAGGAGTGCAAAAATATCAAGGGCCTTGGTGGATCTTCTGATGCTCAAACTGTATCTTATCGTTTATGGGTGAGTGGTTCGTTGTCTTATGCTGATAAGATTTCTGATGGGTTTTACAACATATTAGGAATGAATCCATATTTGTGGGTTATGTGTAATGCCACAGAGGATGGTAAACAAATACCATCTCTAATGGCATTAAAAGGGATTGAACCCAGTGAGACATCAATGGAGGTTGTTCTTATTGATAGGCGTGGGGATTCAATGCTCAGGGAATTAGAAGATAAAGCTCAAGAAATTTACTTTGCTGCTGAGAATACATTAGTCTTGGCAGAAAACCTTGGCAAGCTTGTCGCTGTCTATATGGGGGGCTCTTTTCCGGTGGAACAAGGTGATCTTCATCAGCGGTGGCAAGCTGTTAGCAAGAGATTACAAGATCTGCAGAAGTGCATTGTGCTACCAATTGGCAGTTTCTCCTCAGGACTTTGCAGGCATAGAGCTATTCTGTTCAAGAAATTGGCAGATTACGTAGGTTTGCCTTGTAGGATAGCTCGAGGTTGCAAGTATTGTGTCGCAGATCACCGGTCTTCTTGTCTGGTAATAATTGAGGACGACAGAAGATTGTCAAGAGAATTTGTGGTTGATCTTGTTGGGGATCCAGGAAACGTACATGGTCCAGATTCCTCTATCAATGGAGGTGTATTGTCTCGTGTGCCTTCACCACTTCAAGTATCTCATTTGACAGAGTTTCAACAACCTTATATGGATAGTGACATAAGTAATCAGTTACTGCATTCAAATGACACATTTGCTGCTCCAGAAAATGCTTTGCATACAGACCCCCATGTTGAGAGTAAACATGTGAAGGGAATTGTTGTCAGTGATAAGCCAAAATTTCCAAATGATCCACTTTACCAACCTTATCAAGCTTTGGAAGCTAAGCCATGTGAAGTTCTTGTTGCGGCTGAAACAGCAGGAGATGAGAATTCTAGACCTAGAGAAGACAAAATTATTATCAGGCAGACTTACAAGAAGGAGGTTGTTCTGTCCAAAAATTCACCATTGCAATCTGGCAGACCGCCAAAATCTACTTTAATAGGCAAAATGGATGTAATGGAGCCTGGAGGTAGAACTGGGAACCGTGAGAAACATCCGACAACAACAAATCCAAGATATCTGCATCTTGAACCTTTTCTTGCAATGGACTGGCTTGAGATCTCATGGGATGAATTACATATAAAAGAGCGTGTAGGAGCTGGTTCATTTGGAACAGTACATCGTGCTGAATGGAATGGATCGGATGTTGCAGTCAAGCTGCTTACTGTCCAGGATTTTCATGATGATCAGTTGAAGGAGTTTTTAAGGGAGGTTGCAATCATGAAACGCGTCCGTCATCCAAATGTGGTGTTGTTCATGGGGGCTGTTACCAAACGCCCTCATCTATCAATTGTGACTGAATATTTGCCCAGAGGAAGCCTCTACCGTCTGATACACAGACCAGCTGCTGGGGAGTTGTTGGACCAGAGGAGACGTATCCGTATGGCTCTGGATGTGGCCAAGGGTATCAACTATCTTCATTGTCTGAGCCCACCCATTGTGCATTGGGATCTGAAATCTCCTAACTTGTTGGTTGATAAAAATTGGAACGTAAAGGTGTGTGATTTTGGTCTCTCAAGATTTAAAGCTAATACGTTCATATCATCAAAATCAGTTGCTGGAACTCCTGAATGGATGGCCCCCGAATTTCTCCGTGGAGAACCCTCAAATGAGAAGTCTGATGTCTATAGCTTTGGTGTAATATTATGGGAGCTTGTCACCATGCAACAGCCTTGGAATGGACTGAGCCCTGCGCAGGTAGTTGGTGCTGTAGCTTTCCAGAACAGGAGGCTCACTGTTCCACAGAACACTTCTCCAATGTTGGCGTCTCTAATGGAAGCCTGCTGGAATGATGACCCGGTACAACGCCCATCCTTCGCTAGCATTGTGGATACATTAAAGAAACTACTCAAGTCTCCACTACAGTTGATTCAGATGGGAGGAACAATGAAGAGTTAAGATACTCTCTCCACTTATCTAGGAGAAGAATAAATTCATCATAGTTCGAAGATACATAGTTTACGTAACGCTGACGAAATCCGGTAAAACTTTGCCCAACAACTGCAAATATGTTGGCTCTCTTCAACTTTTTGAATGATAACAAGCCTCTGTTAGTTCCAGTTATAGATAAAGAGGCATTTCTAAAGCTGTTTAA
ATGCCGCATAGAACGACTTACTTTTTTCCAAGGCAATTTCCTGATCGTGGGTTGGATGCATCTGCAAAGTTTGTTAATGATCACGAGAAGGAGAAGGAGAAGAAGATCAGTGACGTTGAAGATCGAAAATCTTCTTCGAAAGAGAGAGATGTTGTCGCGTCGAAACAGCTCATAAGTGATGTGAAAGAGACTGATAACAATAATGATGATGCTACGTTTTCGTACGGGAACCGTGATAAGATTCACGGGAAGCAGTTGGCTGCTTTTGTGAACTGGCTGACTGAGAAAAATAAGAAAGGGAAATCGATACGGAATCACGTGAAGATCAAATTGGATGATGGAGATACAGAGGATGAACATGAACTTTTGCTACCTGTTCCACCTGAAGCTGTACCGATACATGAATTGCAGGTTGATTGCCACGTGGCACCGCTAGAGCAGAAACAGCAGGGGACATTTGATCGGAAAGCTTCATTGCAGAGGTTATCGAGTAGTGGAAGCAATTACAGTTGTGTGGGGAAGCAATTTGAGAGACAAACTTCATTGCAAAGGCTGTCGAGTTGGGGAAGTACTAGTTATGCGGGGAGTTTGTTTTCAGGAACAACGGTGGATGGGAACTGGCCGAGTACGGGAGTTAAAGACACGCAGACGTCGACGACAAGGGAAGTGGAGGAGGAAGTGGTGGGGCAGGATGCGGAGGAGAGAGTTGATAACGAAGATACATTGATACAGAAGTCGAAGGAGAGCTATTACTTGCAGCTGACGCTCGCTAAAAAGCTTGTAGAGCAAGCAATGCTTGCTTCTGGAGAGCCTATTCTTCTGCAGGAGTGCAAAAATATCAAGGGCCTTGGTGGATCTTCTGATGCTCAAACTGTATCTTATCGTTTATGGGTGAGTGGTTCGTTGTCTTATGCTGATAAGATTTCTGATGGGTTTTACAACATATTAGGAATGAATCCATATTTGTGGGTTATGTGTAATGCCACAGAGGATGGTAAACAAATACCATCTCTAATGGCATTAAAAGGGATTGAACCCAGTGAGACATCAATGGAGGTTGTTCTTATTGATAGGCGTGGGGATTCAATGCTCAGGGAATTAGAAGATAAAGCTCAAGAAATTTACTTTGCTGCTGAGAATACATTAGTCTTGGCAGAAAACCTTGGCAAGCTTGTCGCTGTCTATATGGGGGGCTCTTTTCCGGTGGAACAAGGTGATCTTCATCAGCGGTGGCAAGCTGTTAGCAAGAGATTACAAGATCTGCAGAAGTGCATTGTGCTACCAATTGGCAGTTTCTCCTCAGGACTTTGCAGGCATAGAGCTATTCTGTTCAAGAAATTGGCAGATTACGTAGGTTTGCCTTGTAGGATAGCTCGAGGTTGCAAGTATTGTGTCGCAGATCACCGGTCTTCTTGTCTGGTAATAATTGAGGACGACAGAAGATTGTCAAGAGAATTTGTGGTTGATCTTGTTGGGGATCCAGGAAACGTACATGGTCCAGATTCCTCTATCAATGGAGGTGTATTGTCTCGTGTGCCTTCACCACTTCAAGTATCTCATTTGACAGAGTTTCAACAACCTTATATGGATAGTGACATAAGTAATCAGTTACTGCATTCAAATGACACATTTGCTGCTCCAGAAAATGCTTTGCATACAGACCCCCATGTTGAGAGTAAACATGTGAAGGGAATTGTTGTCAGTGATAAGCCAAAATTTCCAAATGATCCACTTTACCAACCTTATCAAGCTTTGGAAGCTAAGCCATGTGAAGTTCTTGTTGCGGCTGAAACAGCAGGAGATGAGAATTCTAGACCTAGAGAAGACAAAATTATTATCAGGCAGACTTACAAGAAGGAGGTTGTTCTGTCCAAAAATTCACCATTGCAATCTGGCAGACCGCCAAAATCTACTTTAATAGGCAAAATGGATGTAATGGAGCCTGGAGGTAGAACTGGGAACCGTGAGAAACATCCGACAACAACAAATCCAAGATATCTGCATCTTGAACCTTTTCTTGCAATGGACTGGCTTGAGATCTCATGGGATGAATTACATATAAAAGAGCGTGTAGGAGCTGGTTCATTTGGAACAGTACATCGTGCTGAATGGAATGGATCGGATGTTGCAGTCAAGCTGCTTACTGTCCAGGATTTTCATGATGATCAGTTGAAGGAGTTTTTAAGGGAGGTTGCAATCATGAAACGCGTCCGTCATCCAAATGTGGTGTTGTTCATGGGGGCTGTTACCAAACGCCCTCATCTATCAATTGTGACTGAATATTTGCCCAGAGGAAGCCTCTACCGTCTGATACACAGACCAGCTGCTGGGGAGTTGTTGGACCAGAGGAGACGTATCCGTATGGCTCTGGATGTGGCCAAGGGTATCAACTATCTTCATTGTCTGAGCCCACCCATTGTGCATTGGGATCTGAAATCTCCTAACTTGTTGGTTGATAAAAATTGGAACGTAAAGGTGTGTGATTTTGGTCTCTCAAGATTTAAAGCTAATACGTTCATATCATCAAAATCAGTTGCTGGAACTCCTGAATGGATGGCCCCCGAATTTCTCCGTGGAGAACCCTCAAATGAGAAGTCTGATGTCTATAGCTTTGGTGTAATATTATGGGAGCTTGTCACCATGCAACAGCCTTGGAATGGACTGAGCCCTGCGCAGGTAGTTGGTGCTGTAGCTTTCCAGAACAGGAGGCTCACTGTTCCACAGAACACTTCTCCAATGTTGGCGTCTCTAATGGAAGCCTGCTGGAATGATGACCCGGTACAACGCCCATCCTTCGCTAGCATTGTGGATACATTAAAGAAACTACTCAAGTCTCCACTACAGTTGATTCAGATGGGAGGAACAATGAAGAGTTAAGATACTCTCTCCACTTATCTAGGAGAAGAATAAATTCATCATAGTTCGAAGATACATAGTTTACGTAACGCTGACGAAATCCGGTAAAACTTTGCCCAACAACTGCAAATATGTTGGCTCTCTTCAACTTTTTGAATGATAACAAGCCTCTGTTAGTTCCAGTTATAGATAAAGAGGCATTTCTAAAGCTGTTTAA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc04g076480.2.1 | SL2.50ch04:61341256..61348995 | 959 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc04g076480.2 | SL2.50ch04:61341061..61348995 | 7,935 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc04g076480.2.1.1 | SL2.50ch04:61348105..61348995 | 891 | - | n/a |
| exon | exon:Solyc04g076480.2.1.10 | SL2.50ch04:61343485..61343569 | 85 | - | n/a |
| exon | exon:Solyc04g076480.2.1.11 | SL2.50ch04:61343304..61343402 | 99 | - | n/a |
| exon | exon:Solyc04g076480.2.1.12 | SL2.50ch04:61343160..61343228 | 69 | - | n/a |
| exon | exon:Solyc04g076480.2.1.13 | SL2.50ch04:61341689..61341820 | 132 | - | n/a |
| exon | exon:Solyc04g076480.2.1.14 | SL2.50ch04:61341496..61341590 | 95 | - | 1 |
| exon | exon:Solyc04g076480.2.1.15 | SL2.50ch04:61341061..61341362 | 302 | - | n/a |
| exon | exon:Solyc04g076480.2.1.2 | SL2.50ch04:61347465..61347763 | 299 | - | 1 |
| exon | exon:Solyc04g076480.2.1.3 | SL2.50ch04:61347237..61347381 | 145 | - | n/a |
| exon | exon:Solyc04g076480.2.1.4 | SL2.50ch04:61346312..61346427 | 116 | - | 1 |
| exon | exon:Solyc04g076480.2.1.5 | SL2.50ch04:61345715..61345923 | 209 | - | 2 |
| exon | exon:Solyc04g076480.2.1.6 | SL2.50ch04:61344976..61345395 | 420 | - | 2 |
| exon | exon:Solyc04g076480.2.1.7 | SL2.50ch04:61344831..61344871 | 41 | - | n/a |
| exon | exon:Solyc04g076480.2.1.8 | SL2.50ch04:61344251..61344319 | 69 | - | n/a |
| exon | exon:Solyc04g076480.2.1.9 | SL2.50ch04:61343663..61343763 | 101 | - | 1 |
| intron | intron:Solyc04g076480.2.1.10 | SL2.50ch04:61343570..61343662 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.11 | SL2.50ch04:61343403..61343484 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.12 | SL2.50ch04:61343229..61343303 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.13 | SL2.50ch04:61341821..61343159 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.14 | SL2.50ch04:61341591..61341688 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.15 | SL2.50ch04:61341363..61341495 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.2 | SL2.50ch04:61347764..61348104 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.3 | SL2.50ch04:61347382..61347464 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.4 | SL2.50ch04:61346428..61347236 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.5 | SL2.50ch04:61345924..61346311 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.6 | SL2.50ch04:61345396..61345714 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.7 | SL2.50ch04:61344872..61344975 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.8 | SL2.50ch04:61344320..61344830 | n/a | - | n/a |
| intron | intron:Solyc04g076480.2.1.9 | SL2.50ch04:61343764..61344250 | n/a | - | n/a |
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