Solanum lycopersicum mRNA Solyc04g070990.2.1

mRNA details  
Name
Solyc04g070990.2.1
Type
mRNA
Length
1,973
Organism
Solanum lycopersicum
Description
PHD-finger family protein expressed (AHRD V1 *--- Q53MN0_ORYSJ); contains Interpro domain(s) IPR003656 Zinc finger, BED-type predicted
Location(s)
SL2.50ch04:57841158..57850241
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003677
Length
9084
Nb exon
8
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g070990.2.1 PHD-finger family protein expressed (AHRD V1 *--- Q53MN0_ORYSJ); contains Interpro domain(s) IPR003656 Zinc finger, BED-type predicted

CCGATGACCGAAACCCCTTTTCCCTTTTTATGCAATGATTTCTCTGAAACCCTATAACTCTTCAACTTCTCTAAAATCATCCATTTTCTCAACTTATCACTACTTCTTCCTTTAACTCTGCAGATTCAGATGGTCGACGTCTGACGGAAGCTTGTTGAAGTGAGAAAAGACAATCTTACAGATTGAAAGGAAGGCAGTTTACTTGGTATAGACTAGTGCTTTCAGATCACAATTGTGACATGGCTGCAAAACCAATTGACGATACCATATGGAGGGGTAGTTTCATGATCTCCCGTCCAGAGATGAGATTGAATCTTACAGCCCATCTATCAAGTAAAGCGTGCGCAAAAGTATGGCTGGCAGCTAAAGAGATGGCGGAGGTGATCTATCCTGAATTCCTTCCTAAGCGTGATGTGTGGCCAAAGAGTTTTAAAAGTGCTAAACTGATTGATGATAATATTGCCATTTATTTCTTTTCAGTTAAAGGCAGAGATGATCAAGTTTTTGAAAATCTGCTGTATAATTTAAGACACTACGACATTGCATTAAGAGCTTTGGTTGGTGATTCTGAACTCCTGATTTTTACTTCTGCCCATCTGCCAGAAAAGCATCACATTGCAGGATTTGAGGGTAAAGTATATCTATGGGGCGTCTTTAGTGGAAGACAAGCTCCTCCTCAAGAGTCTCCTGATGATTGTTTTATTCATAATACCCGAGTGACACAAGCTTCAATCCCAAATTCAGCAAACGATGGGAAGGATAGAAGTTGCAAGGAATTCTCCAATAGGAAAGATCCTTCAACTGCCTCAAAATCGGCTAGAAAGGGAAGACCACTTGATGACGCTTGGCAACATGCTACTCCAGTAGATGGAAAGAAGCAGAGGACAGTTTGCAATTACTGCGGATTTATCTCTTCCTCTGGAGGCATTACTTATCTTAAGACACATCTGGGTGGAGGTGATCCGACGGGTTCACTGAAGGGTTGTCCAAATGTACCACCAGAAGTCAAAAGGGTGATGAAAGAATGGTTACTAGGAACTATAAGAGGGGGGAAGGCCCCACAGCTACAGGAAATCAGGACTGACTTTGAAGTACCTGCATCCAAAAAATCAGTTAGAAGGGGAAGGCCACTTGATGCTGCCTGGGATTATGCTACACCAGTTGATGCAAAAAGACAGAGAGCAGTGTGCAAGTATTGCGGTTTCATATCTTCTTCTGGAGGAATTACACATCTTAAGGCACATTTGGCTGGAGGTGATCCAAAAGGGCCCTCAAAAGGTTGTCCCAATGTGCCGCCTGAAGTTAAAAGGGCAATGGCAGAATCGCTCAACAGAACAGTTAAAGGAGCGAAATCCATGCAGCCAGATGAGATCAGGAGGTACATGAAAGCGGAAAATGATTGGTCTCCTCCCAGGTCAGATGACTACTCGTTGAATCAACATAGAATTGTCAAGAATGCTCAGTACTCACATTTTGCCAATGGGAATTCTGTTAATGATATGACCCTGTCAAAGCAATCAGAGACTGCACATGTTGATAGTTATATGGAGGTTATGAGTTCTCACAATGCTTGTAAGTCGAGCTTCTTAAGCAAACCTTCAACTCGAGTAGGTTTTATTTAACGTGTGCATCAGTAGGTTGAGGACTAAGAGCTAGGAAGTCGCTTAAATCTAATGGTGGGTACATGCTCCATTAATTTATGACATGACAAAACATACATGAGGACAGATGAAAAAGTTGATTGTGCTACTTTATCAACAAAGAGGTTCTTTTGATGTACAAACACCTTTTAACCCAAAGCTTGACAACGACAACATGGTGACATTGCTTGTGATTATTGTATCTATGTATTTATTGCGACGTTCCCTCCAGTTTGGAGTGATTTTGCAGTTCTATTAAACAGGTTGAGAATCTCCTCTTTAGTGTACGAACATTTGAAAGTTCTGAAGTTGATACTTGCTCAGAAAACTTGG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g070990.2.1SL2.50ch04:57841508..57849213461-n/a
Add items to a list:

Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g070990.2SL2.50ch04:57841158..578502419,084-n/a
Add items to a list:

Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g070990.2.1.1SL2.50ch04:57850113..57850241129-n/a
exonexon:Solyc04g070990.2.1.2SL2.50ch04:57849179..57849323145-1
exonexon:Solyc04g070990.2.1.3SL2.50ch04:57848826..57849041216-1
exonexon:Solyc04g070990.2.1.4SL2.50ch04:57848625..57848749125-2
exonexon:Solyc04g070990.2.1.5SL2.50ch04:57848374..57848556183-2
exonexon:Solyc04g070990.2.1.6SL2.50ch04:57844940..57845233294-2
exonexon:Solyc04g070990.2.1.7SL2.50ch04:57841989..57842285297-2
exonexon:Solyc04g070990.2.1.8SL2.50ch04:57841158..57841741584-n/a
intronintron:Solyc04g070990.2.1.2SL2.50ch04:57849324..57850112n/a-n/a
intronintron:Solyc04g070990.2.1.3SL2.50ch04:57849042..57849178n/a-n/a
intronintron:Solyc04g070990.2.1.4SL2.50ch04:57848750..57848825n/a-n/a
intronintron:Solyc04g070990.2.1.5SL2.50ch04:57848557..57848624n/a-n/a
intronintron:Solyc04g070990.2.1.6SL2.50ch04:57845234..57848373n/a-n/a
intronintron:Solyc04g070990.2.1.7SL2.50ch04:57842286..57844939n/a-n/a
intronintron:Solyc04g070990.2.1.8SL2.50ch04:57841742..57841988n/a-n/a
Add items to a list:
Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17800353%2Fdetails feature 17800353
User comments 
Please wait, checking for comments. (If comments do not show up, access them here)