Solanum lycopersicum mRNA Solyc04g056450.2.1

mRNA details  
Name
Solyc04g056450.2.1
Type
mRNA
Length
1,922
Organism
Solanum lycopersicum
Description
Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V1 ***- C7LRK7_DESBD); contains Interpro domain(s) IPR003333 Cyclopropane-fatty-acyl-phospholipid synthase
Location(s)
SL2.50ch04:54214940..54221972
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0008610
Length
7033
Nb exon
16
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g056450.2.1 Cyclopropane-fatty-acyl-phospholipid synthase (AHRD V1 ***- C7LRK7_DESBD); contains Interpro domain(s) IPR003333 Cyclopropane-fatty-acyl-phospholipid synthase

ATGGTACATCTACTTAATAAGATTTCTGATGTCAAAATGCAAAATCATGGTCTCCTCCTATGTGACAGTGATATTTACCTTCATCAAGACAAAATGTTCCTGCCTCATGACCCGGCAGCATGGAGTGCTTGTAACTTTCTTGGAACCATAAATAATAGAGGATGTGCAACATATTGGCTCAATGTAATCCAGAATCTCGGTGACTCAGAGCTGCCTTATCTCGTAACCTTCGATCCTCCCCATACACCAGAGCATACATTGGTTAAGTGGAGAACAAGCCGTCCACTCCCCTCAATTGCTGCATCAAAAGCTTCACGTGAGCTACATCAAATCCAAGGGAAGAGAGGAATATGGTTTTCTGGAGCATATCAAGGCGGGTGTGATTGCTGCAGAAATGGGATGCTTAGAAGGAATTGTAGTATTCTGTACAACCCCAAATATCTGTTACCAACCTGGCCTGAAACTGGAGCACACCTCCTTGTTACTAGATTTTTCAGAAGTTTCGTTCAAACAGGATGCATAATCTTGTTGGAAGAAGGAGGTACAATTTTCACCTTCCAAGGAAGAGACAGGAAATGCTCTCTCAAAGTTTCTCTTACAGTTCGTAATATGCAGTTTTACTGGAAGGTTGCAACTCAAGCTGACCTAGGTCTCGCTGATGCTTTTATTCATGGGGATTTTTCTTTTGTTGATAAGAATGATGGTCTTCTTAATCTTATCACGATATTTATTGCAAACAGAGAATTGAAAGAATCTGTTAAACCGACTAGCAAGTATAGAGGCTGGTGGACACCGGTGATTTTTACAGCAGCGCTATCATCTGCAAAGTACTTCTATCGACATATTTCAAATCAAAACACACTGACTCAGGCTCGTCGAAATATCTCTCGTCATTATGACGTGAGTAATGAACTGTTCTCACTCTTTCTGGATGAGACAATGACATACTCATGTGCTATTTTCAAGAGCGAGGATGAAGACCTAAAAGATGCGCAGCTGAGAAAGATCGATGTTCTCATTAGAAAGGCAAAAGTTGGTAAGGAACATCACATTTTAGAGATTGGATTTGGTTGGGGAAGTTTTGCGATGGAAGTTGTCAAGCAAACAGGATGTAAATATACTGGTATAACCCTCTCCGAGCAGCAGCTGGAGTATGCACAATTGAGAGTTAAGCAAGCAGGACTTCAGGATCAAATAACATTTATCCTATGTGACTATCGCCAAATCCCAAGTAAGGACAAGTATGACAGGATTATATCAATCGGGATGATAGAACATGTTGGTCATGATTACATGGAGGAATTCTTTACTTGCTGTGAATCTGCACTAACAGAAGATGGACTTCTAGCTCTGCAGTTCGTTTCAATGCCAGACGGGAGTTATGACGAATATAGGCACAGCACGGGCTTCATAAAAGAGTACATATTCCCAGGTGGATGCTTGCCCTCACTAAGTCGAGTAACATCAGCCATGGCTGCTACATCCAGATTATGGAAAGAAATCATTATAGGAATTCATTACTATCAAACACTGAGATGTTGGCGAAGAAACTTCCAGAAAAACAAAAGCCAAATTCGTGCTTTGGGATTCGATGACAAGTTCATCAGGACATGGGGGTACTACTTTGACTACTGTGCTGCTGGATTCAAAACGCGCACAATAGGAGATTATCAGATTGTATTTTCAAGGCCTGGCAATGTTGCAGCATTTGGTGATCCTTACAATGATACTATGCCTTCAGCTTATTAGAGTTCCTTTGTTTGGAATATTATATTGTAACTTTGTCTTTGCAAATAAGTTAGTTCCTCATATTAGCATGAAAGACCTAATAAAGACTTATGTGTCACTGGATCATGCTTAATTCTGTGAACTTTTTCCAATTACCTAATAAAACTTATTCAAGGAAATAATTATTATTATTG
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g056450.2.1SL2.50ch04:54214939..54221799583+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g056450.2SL2.50ch04:54214940..542219727,033+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g056450.2.1.1SL2.50ch04:54214940..54215131192+n/a
exonexon:Solyc04g056450.2.1.10SL2.50ch04:54217599..54217760162+n/a
exonexon:Solyc04g056450.2.1.11SL2.50ch04:54218047..5421812074+n/a
exonexon:Solyc04g056450.2.1.12SL2.50ch04:54218211..5421830494+1
exonexon:Solyc04g056450.2.1.13SL2.50ch04:54218380..54218529150+n/a
exonexon:Solyc04g056450.2.1.14SL2.50ch04:54218607..5421866862+n/a
exonexon:Solyc04g056450.2.1.15SL2.50ch04:54218792..54218897106+1
exonexon:Solyc04g056450.2.1.16SL2.50ch04:54221725..54221972248+n/a
exonexon:Solyc04g056450.2.1.2SL2.50ch04:54215235..54215415181+n/a
exonexon:Solyc04g056450.2.1.3SL2.50ch04:54216179..54216329151+2
exonexon:Solyc04g056450.2.1.4SL2.50ch04:54216563..54216665103+1
exonexon:Solyc04g056450.2.1.5SL2.50ch04:54216750..5421684596+n/a
exonexon:Solyc04g056450.2.1.6SL2.50ch04:54216920..5421697556+n/a
exonexon:Solyc04g056450.2.1.7SL2.50ch04:54217058..54217181124+1
exonexon:Solyc04g056450.2.1.8SL2.50ch04:54217283..5421734563+n/a
exonexon:Solyc04g056450.2.1.9SL2.50ch04:54217460..5421751960+n/a
intronintron:Solyc04g056450.2.1.1SL2.50ch04:54215132..54215234n/a+n/a
intronintron:Solyc04g056450.2.1.10SL2.50ch04:54217761..54218046n/a+n/a
intronintron:Solyc04g056450.2.1.11SL2.50ch04:54218121..54218210n/a+n/a
intronintron:Solyc04g056450.2.1.12SL2.50ch04:54218305..54218379n/a+n/a
intronintron:Solyc04g056450.2.1.13SL2.50ch04:54218530..54218606n/a+n/a
intronintron:Solyc04g056450.2.1.14SL2.50ch04:54218669..54218791n/a+n/a
intronintron:Solyc04g056450.2.1.15SL2.50ch04:54218898..54221724n/a+n/a
intronintron:Solyc04g056450.2.1.2SL2.50ch04:54215416..54216178n/a+n/a
intronintron:Solyc04g056450.2.1.3SL2.50ch04:54216330..54216562n/a+n/a
intronintron:Solyc04g056450.2.1.4SL2.50ch04:54216666..54216749n/a+n/a
intronintron:Solyc04g056450.2.1.5SL2.50ch04:54216846..54216919n/a+n/a
intronintron:Solyc04g056450.2.1.6SL2.50ch04:54216976..54217057n/a+n/a
intronintron:Solyc04g056450.2.1.7SL2.50ch04:54217182..54217282n/a+n/a
intronintron:Solyc04g056450.2.1.8SL2.50ch04:54217346..54217459n/a+n/a
intronintron:Solyc04g056450.2.1.9SL2.50ch04:54217520..54217598n/a+n/a
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Related viewsNone found
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