Solanum lycopersicum mRNA Solyc04g054490.2.1

mRNA details  
Name
Solyc04g054490.2.1
Type
mRNA
Length
2,219
Organism
Solanum lycopersicum
Description
Aspartyl protease family protein (AHRD V1 **-- D7M2T2_ARALY); contains Interpro domain(s) IPR001461 Peptidase A1
Location(s)
SL2.50ch04:52609726..52618345
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006508
Length
8620
Nb exon
10
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g054490.2.1 Aspartyl protease family protein (AHRD V1 **-- D7M2T2_ARALY); contains Interpro domain(s) IPR001461 Peptidase A1

ACGCGTGATCTCCATCTTCGTCTTCTTTCTTACTCCTCACCCTTTCTACTTTCCTCTCTTTCACTTGCCCAAAAATTCTTCTTTCTCTATAACCTATACATATAGACTATATATATATACAATCACCCACCTACCCCATAGCCATTAATTTTATCCCATCTTACTCTATTATTTCACTCTGTAAATAGAGAGAGACCCATCTGTATACACATTTATTTGCAGTATATTATGATGAGGAAGACTTTGTTAAACTAGATCTTGGGTAAGTGGGTGTGTGTTTTGAGGAGTTATTGTAATTCAAATGGAGATTTGGAAAGTGGGTTTTGTAGCGATGGTGTTGGGTTTAGGTATACTGGTTGAATGTGGGGTGTCGGATATGTATTCCTCAAAATTAGTTCATAGATTCTCTGATGAAGTGAGGAAAGTTAGGGTTTCAAGGAATGGGGAAGTGGGTGTTGTGTGGCCGCAACATAGGAGCTTCGAGTATTATGGGAAGTTGATGAACAGTGATTTGCAGCGGCAGAAAATGAAGCTTGGTCCTCAGTTTCAGCTACTTTTTCCTTCTCAGGGTAGCAAAACGATGCCGTTGGGAAATGACTTCGGATGGTTACATTACATGTGGATTGATATAGGAACACCAAATGTTTCTTTTCTCGTTGCACTGGATGCTGGAAGTGACTTGCTGTGGGTTCCATGTGAATGTGTACAATGTGCTCCTCTTTCAGCCAGTTATTATAGCAGCCTGGATAAAGATCTAAATGAGTACAATCCATCTGGCTCAAGCACAAGTAAGTTCCTGTCGTGCAGCCATCAGTTGTGTGAATTGGGCTCAAATTGCAAAAACCCTAAGCAACCCTGTCCGTATACTGTGAATTATGTATCAGAAGATACATCCACATCTGGAGTGCTCGTGGAAGATATCTTGCACCTTGCATCAGGCAGCCGTATGGCAGCCAACGGCTCTGCCAGGGCTCCAGTCACTTTTGGATGTGGCAGTAAGCAAACTGGTGGTTACCTTAATGGAGTTGCACCTGATGGCCTTATGGGTTTGGGACCTGGAGAGATCTCAGTTCCCAGTCGTCTTGCCAAAGCTGGATTGGTTCGAAACTCCTTTTCTCTTTGTTTTAAGGAAGATGATTTAGGAAGGATTTTCTTTGGAGACCAAGGGCCTGCTGGCCAGCAGACAACTTCTTTTCTGCCTTCAGAAGGACAATTTGTTACTTATGTTGTTGGCGTGGAATCATGTTGTTTTGGGAGCTCCTGTATTGAGCAGACGAGCTTCAAAGCCATTGTGGATAGTGGGACCTCATTTACATTTCTCCCAGATCAAATTTATGATAGAGTTGTTAAAGAGTTTGACAGAAAAGTGAATGCTACGAAAGCTAGCTTTGAAGGATATCCTTGGCAATATTGCTACAAATCCAGTTCTGAAGGTTTACCGAAGATCCCTTCATTTACTCTGAAGTTCACGATGAATAGCAGCTTTATAGTCCAGGATCCCGTATTTATGATTTATGGCAGTCAAGGTGCTGTTGGGTTTTGTTTAGCTGTGGAGCCTTCAGGCATAGATATTGGAACGATTGGACAGAACTTCATGTCGGGATATCGCATGGTGTTTGATAGAGAGAACATGAAACTGGGCTGGTCACGCTCTGACTGTGAAGACCTTACTGATAATAATAGACTGCCATTGGCTCCAGCAGATGGTAGCTCGCCAAACTCACTGCCAGCAGAACAGCAGAATACCCCTAATAGCTCAGGAGTTGCCCCTGCTGTTGCCGGGAGGACGCCCTCAAATTCAGCAGCACCAGCTAGTCGGGGGATGCCATCCAAGTTATGCTTAACAAAGTTGCTTTTTCAGTTGCTGCTTGTATCAAGTAACTTCCGATGGTCCTTACATACATTTACCTTTTAAGCTTGATAATGGCATCCCCTATAGGTTCATAGTATTATAGATGAGTAGTTTCCCGTGTAAATCATGTTTCCGTCTTTTGGAGCCGTTTTTGTTTTCTTATTCCCCATACCCCGCCTTTTTCGGGTTTATTGTTATTTTGAGATATTAGCCATTAGATAGGATGGGGTGGCTAGATGAAGAGCTTGTTTTATGCATCTTCTGACTTGGGATGTTCAGTTTGGTGTTCCCTTATTAGACACTGTTATAAATACATATGTAATGCATACTGTTGAATTCCATTCATATGATTCTATTAAGTTTGTCC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g054490.2.1SL2.50ch04:52610026..52618041538+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g054490.2SL2.50ch04:52609726..526183458,620+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g054490.2.1.1SL2.50ch04:52609726..52610331606+n/a
exonexon:Solyc04g054490.2.1.10SL2.50ch04:52617785..52618345561+2
exonexon:Solyc04g054490.2.1.2SL2.50ch04:52611411..52611549139+n/a
exonexon:Solyc04g054490.2.1.3SL2.50ch04:52613465..52613706242+1
exonexon:Solyc04g054490.2.1.4SL2.50ch04:52613832..52614059228+n/a
exonexon:Solyc04g054490.2.1.5SL2.50ch04:52614238..52614376139+1
exonexon:Solyc04g054490.2.1.6SL2.50ch04:52614449..5261451971+1
exonexon:Solyc04g054490.2.1.7SL2.50ch04:52614600..52614699100+n/a
exonexon:Solyc04g054490.2.1.8SL2.50ch04:52614932..5261499261+1
exonexon:Solyc04g054490.2.1.9SL2.50ch04:52615165..5261523672+n/a
intronintron:Solyc04g054490.2.1.1SL2.50ch04:52610332..52611410n/a+n/a
intronintron:Solyc04g054490.2.1.2SL2.50ch04:52611550..52613464n/a+n/a
intronintron:Solyc04g054490.2.1.3SL2.50ch04:52613707..52613831n/a+n/a
intronintron:Solyc04g054490.2.1.4SL2.50ch04:52614060..52614237n/a+n/a
intronintron:Solyc04g054490.2.1.5SL2.50ch04:52614377..52614448n/a+n/a
intronintron:Solyc04g054490.2.1.6SL2.50ch04:52614520..52614599n/a+n/a
intronintron:Solyc04g054490.2.1.7SL2.50ch04:52614700..52614931n/a+n/a
intronintron:Solyc04g054490.2.1.8SL2.50ch04:52614993..52615164n/a+n/a
intronintron:Solyc04g054490.2.1.9SL2.50ch04:52615237..52617784n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17797788%2Fdetails feature 17797788
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