Solanum lycopersicum mRNA Solyc04g054320.2.1

mRNA details  
Name
Solyc04g054320.2.1
Type
mRNA
Length
1,580
Organism
Solanum lycopersicum
Description
BZIP transcription factor (AHRD V1 **** A7Y1S1_BRAJU); contains Interpro domain(s) IPR011616 bZIP transcription factor, bZIP-1
Location(s)
SL2.50ch04:52296653..52303894
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0006355
Length
7242
Nb exon
10
Sifter term
GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g054320.2.1 BZIP transcription factor (AHRD V1 **** A7Y1S1_BRAJU); contains Interpro domain(s) IPR011616 bZIP transcription factor, bZIP-1

CCCCATTTTCGAACATACACATGTAGAAATTTTCTCTCTCTTTGTGTATACAAACTTCATACATATTCATATATGCAAAAAGGATTTAGGCTTTTAGAGTTTTGAAGTGGGAAAAAAAAGGTTTCTTGAAGACTTAGCTGTTGTTGGCTTTAAGTCGGAAGGCAATGAATTCTTCAACATATACTCAATTTGTTGCTTCTAAAAGGATGGGTATATGTGATCCAATCCATCAGATTGGCATGTGGGGAGATTTCAAAGGTAGCAGTTTCCCAGATAGCTTGATTCTTGAAGTCGAGAATTGCCTCGAGAATGAGATGCCTATTATGGAGAAAAGACTAGAGAATGAGATAGAGGAACCATCACAAGTGACAGTTGGAACGTCTAACAGATATGAACCTGAAACAACTAAACGTATTGATAAGGTGCGTAGACGCCTTGCACAAAACCGCGAGGCTGCTCGTAAAAGTCGTTTACGGAAGAAGGCCTATGTCCAGCAGTTGGAAAATAGTAAACTGAAGCTGCTTCAGCTGGAACAAGAACTAGAACGTAATAGACAACAGGGTTTGTATGTAGGTGATGGTTTAGATGCTAGTCAGATAGGTTGCTCTGGAACCGCAAATTCAGGAATAGCTTCTTTTGAAATGGAGTACGGCCATTGGGTGGAAGAGCAAGATAGACAAACAGATGATTTAAGGAATGCTCTGAACTCCCAAATGGGTGAAATAGAATTGCGCATTCTTGTCGAGGATTGCTTGAATCACTATTTTGATCTCTTTCGCTTGAAAGCTACAGCCGCAAATGCCGATGTTCTCTACCTTATGTCTGGCACATGGAAGACATCAGCTGAGCGCTTCTTCTTGTGGATTGGGGGGTTTCGCCCCTCCGAACTTCTAAAGGTTCTCACGCCACATGTGGAACCATTGTCAGATCAACAAATCCAGGAGGTTAGCAACCTCACCCAGTCTTGTCAGCAGGCAGAAGATGCGTTGTCCCAAGGAATGGTAAAACTCCATCAGATTCTTGCTGAGGCTGTTGCAGCTGGTACACTAGGAGAAGGAGTTATCCTTCCACAGATGACTGCTACCATTGAGAAGTTGGAAGCTCTAGTTAGATTTGTAAATCAGGCAGATCATCTCCGCCAAGAAACCCTTCTACAGATGTCCTGCATACTGGCTCCGCACCAATCAGCTCAGGGTCTCCTTGCCTTAGGAGATTACTTTAAACGTCTTCGTGCTCTTAGCTCACTTTGGGCTGGACGTCTTTCTGAACCTGCTTAAAGAGGTAAGAAAGAACCTGTGGGTTTTCAACTTTGCCAATCAAAGCTGTGTGAGCTAAGTAACAAGTATGAGTTGGCGCTCATTTGAAATGTGTATATAAGTTCTGGTATGCTGTAATTGAAACATTTTCTTTTGTTATCACATTGGTTTTGATGATTGTAAATCAATATGGTAGAGGTTATTGTTACTCCAAGTTGTGCCTCTCTTTGTCTATGATGGGAGCCAAGCAATTTTGAATGCTTTGCAGATGTAACAAAATGAGCCAATATTTTATTGTGCAAAATTAAATTCATGTTTGCAATC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g054320.2.1SL2.50ch04:52296955..52302338371-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g054320.2SL2.50ch04:52296653..523038947,242-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g054320.2.1.1SL2.50ch04:52303816..5230389479-n/a
exonexon:Solyc04g054320.2.1.10SL2.50ch04:52296653..52297108456-n/a
exonexon:Solyc04g054320.2.1.2SL2.50ch04:52303629..5230370375-n/a
exonexon:Solyc04g054320.2.1.3SL2.50ch04:52302156..52302348193-n/a
exonexon:Solyc04g054320.2.1.4SL2.50ch04:52301987..5230206175-n/a
exonexon:Solyc04g054320.2.1.5SL2.50ch04:52301105..5230116460-n/a
exonexon:Solyc04g054320.2.1.6SL2.50ch04:52300901..5230097878-n/a
exonexon:Solyc04g054320.2.1.7SL2.50ch04:52300718..5230078164-2
exonexon:Solyc04g054320.2.1.8SL2.50ch04:52298860..52299131272-n/a
exonexon:Solyc04g054320.2.1.9SL2.50ch04:52297467..52297694228-n/a
intronintron:Solyc04g054320.2.1.10SL2.50ch04:52297109..52297466n/a-n/a
intronintron:Solyc04g054320.2.1.2SL2.50ch04:52303704..52303815n/a-n/a
intronintron:Solyc04g054320.2.1.3SL2.50ch04:52302349..52303628n/a-n/a
intronintron:Solyc04g054320.2.1.4SL2.50ch04:52302062..52302155n/a-n/a
intronintron:Solyc04g054320.2.1.5SL2.50ch04:52301165..52301986n/a-n/a
intronintron:Solyc04g054320.2.1.6SL2.50ch04:52300979..52301104n/a-n/a
intronintron:Solyc04g054320.2.1.7SL2.50ch04:52300782..52300900n/a-n/a
intronintron:Solyc04g054320.2.1.8SL2.50ch04:52299132..52300717n/a-n/a
intronintron:Solyc04g054320.2.1.9SL2.50ch04:52297695..52298859n/a-n/a
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Related viewsNone found
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