Solanum lycopersicum mRNA Solyc04g026030.2.1

mRNA details  
Name
Solyc04g026030.2.1
Type
mRNA
Length
1,240
Organism
Solanum lycopersicum
Description
Spermidine synthase (AHRD V1 **** Q93X16_SOLTU); contains Interpro domain(s) IPR001045 Spermine synthase
Location(s)
SL2.50ch04:19662555..19666009
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0003824
Length
3455
Nb exon
9
Sifter term
GO:0004766
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g026030.2.1 Spermidine synthase (AHRD V1 **** Q93X16_SOLTU); contains Interpro domain(s) IPR001045 Spermine synthase

GAGGGTTACGTACCACAAATCTACAATTCTTTCTCCTATAAATATAAAAATTAAAAATAGGGGAGAGGAAGAGAAAGGTGTGCTGTATCAATGGAAGAAGCTAATAATAACACAGAATCTCCCTACATTTCTTCTATCTTACCTGGATGGTTCTCTGAGATTAGCCCACTTTGGCCTGGGGAAGCACACTCATTGAAGGTTGAAAAGATATTATTTCAGGGGAAGTCAGATTACCAAAATGTCATGGTTTTTCAGTCATCAACTTACGGAAAAGTGCTTAGTTTGGATGGTGTTATACAACTCACAGAGCGGGATGAATGTGCTTACCAAGAAATGATCACTCATCTCCCACTTTGCTCAATTCCAAACCCCAGAAAGGTGTTGGTTATTGGAGGAGGTGATGGTGGTGTCTTGCGTGAGGTGTCTCGGCATTCTTCTGTTGAACAGATAGACATATGTGAGATTGACAAGATGGTAATTGATGTCTCTAAACAATTTTTCCCTAATGTAGCTATAGGATATGAGGATCCCCGAGTCAAACTCCATGTTGGTGATGGAGTTGCATTTTTGAAAAATGTTCCAGAAGGAACTTATGATGCAGTTATAGTGGATTCCTCTGATCCCATAGGTCCAGCACAAGAGTTGTTTGAAAAACCTTTCTTTGAATCAGTAGCAAGGGCTCTGCGTCGTGGAGGGGTTGTCTGTACTCAGGCTGAGAGCATATGGCTTCACATGCACATAATTGAAGATATCGTGGCAAACTGCCGCCAGATCTTCAAAGGCTCTGTCAACTATGCCTGGACCACAGTTCCTACTTATCCAAGTGGTGTTATTGGTTTCATGGTCTGCTCTACCGAGGGACCTGCGGTTGATTTCAAGAATCCAATTAACCCAATTGATGTTGACGATAGCCACACCAAAACTAGAGGACCCTTGAAGTTCTACAACTCTGAGATTCACTCTGCATCGTTCTGTTTGCCTTCTTTTGCAAAGAGGGTAATTGAATCCAAAGGAAAATGAGTCCTTAGTGGAGCAGGATTTAGCTGTTTTAGAACACTTCATTTCCCACCCCCCCTATACAAGATTAGAACATCTAGCGTTGGAACTTTTATGTTTAATTTGATACTGCGACTAGGCAGTTGAATCCAGAGATGCCTTGCTGATTTTGTTCTAGTTGTAATAATCATGTTGAGCTCAGTCATTGAAGATTTTCTACGGATTAATTTCACTTCTTTTCACT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g026030.2.1SL2.50ch04:19662644..19665789310+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g026030.2SL2.50ch04:19662555..196660093,455+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g026030.2.1.1SL2.50ch04:19662555..19662732178+2
exonexon:Solyc04g026030.2.1.2SL2.50ch04:19663539..1966361577+n/a
exonexon:Solyc04g026030.2.1.3SL2.50ch04:19663722..19663844123+n/a
exonexon:Solyc04g026030.2.1.4SL2.50ch04:19664418..19664522105+n/a
exonexon:Solyc04g026030.2.1.5SL2.50ch04:19664812..1966488473+2
exonexon:Solyc04g026030.2.1.6SL2.50ch04:19664991..1966506272+2
exonexon:Solyc04g026030.2.1.7SL2.50ch04:19665141..19665336196+1
exonexon:Solyc04g026030.2.1.8SL2.50ch04:19665490..19665619130+n/a
exonexon:Solyc04g026030.2.1.9SL2.50ch04:19665724..19666009286+n/a
intronintron:Solyc04g026030.2.1.2SL2.50ch04:19662733..19663538n/a+n/a
intronintron:Solyc04g026030.2.1.3SL2.50ch04:19663616..19663721n/a+n/a
intronintron:Solyc04g026030.2.1.4SL2.50ch04:19663845..19664417n/a+n/a
intronintron:Solyc04g026030.2.1.5SL2.50ch04:19664523..19664811n/a+n/a
intronintron:Solyc04g026030.2.1.6SL2.50ch04:19664885..19664990n/a+n/a
intronintron:Solyc04g026030.2.1.7SL2.50ch04:19665063..19665140n/a+n/a
intronintron:Solyc04g026030.2.1.8SL2.50ch04:19665337..19665489n/a+n/a
intronintron:Solyc04g026030.2.1.9SL2.50ch04:19665620..19665723n/a+n/a
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Related viewsNone found
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