Solanum lycopersicum mRNA Solyc04g008230.2.1

mRNA details  
Name
Solyc04g008230.2.1
Type
mRNA
Length
1,749
Organism
Solanum lycopersicum
Description
Polygalacturonase (AHRD V1 ***- B6TYD6_MAIZE); contains Interpro domain(s) IPR012334 Pectin lyase fold
Location(s)
SL2.50ch04:1901661..1904764
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
GO:0005975
Length
3104
Nb exon
6
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc04g008230.2.1 Polygalacturonase (AHRD V1 ***- B6TYD6_MAIZE); contains Interpro domain(s) IPR012334 Pectin lyase fold

CCACATAAAAAAAACACACACACACACAAAAAAAGTAGTACAATAACATTAAAGTTTTTTTTTTTTTGTAAAATTTTAGTTATTTTTTCCTTCAAATGGAGAAAATATTTCTTTTACTATGTCTTATTATTATTATTATTACTAGTAATTCTATCAATGTTGATGCAAGACATCACATTTCCAAGAAAACAAAGAGCAAAAAAGTTATTAGTCATAATAATAATGCTCCTAGTCCTATCGAAGGTAGCGTAAACGAACCATCACCATCACCATTACCATCATCATCACCAGTTTCTTCTCCTAGTAGTAATGTAGTACCGTCCGATCCGAGTTACGGAGGGGCCCCCACTTTGGACCCGGAAGAGGACTGCATTTTCGATGTCATGGAATATGGAGCCGTCGGTGACGGCTCCACGGATGACACCGAAGCGTTTGTCGCGGCTTGGAAAGCCGCGTGTCAAGTTGAGTCCGCGGTGCTATTAGCTCCCGCGGACCGTATTTTTATGATCACTTCCACTATTTTCTATGGTCCTTGCAAGCCCGGACTCGAATTTCGCGTAAATGGGGTGTTAATGACACCAGAAGGACCAGATTGTTGGCCTAAAAAAGATAGTAAAAGGCAATGGATTGTGTTTTATAAACTTGATAATATGACTTTTAGTGGGACTGGTACTATTGAAGGTAATGGTGAAAAATGGTGGGAACTCCCTTGCAAACCTCATAGGGGACCTAATGGCTCAACTTTACCTGGACCATGTGACAGTCCTTCTATGATAAGATTTTTCATGAGCTCAAATTTGACGGTGCGAGGTTTAAGAATACAAAATAGTCCTATGTTTCACATGAAATTCGATGGATGCGAAGGAGTATTGATAGACCAATTATCAATTTCTTCGCCTAAGCTTAGTCCAAACACTGACGGAATTCATATCGAGGACACCAAGTCTGTAGGAATTTACAACTCCGTCATAGCTAATGGGGATGATTGCATATCAATAGGGCCTGGTTGTTCAAATGTTGAGATTGAAGCAGTCACATGTGGGCCTAGTCACGGGATCAGTATTGGGAGCCTAGGGGTGCACAATAGCCAGGCATGTGTGTCGAACATAACGGTCCGTAACGCCATTATTCGCGATTCGGACAACGGAGTTCGGATCAAGACATGGCAAGGAGGTTCAGGATCAGTAACAGGGCTATCATTTGACACAATTCAGATGGAAAATGTGCGGAACTGCATCATCATAGACCAATACTATTGCCTCTCAAAAGGCTGTCGGAACGAGACGTCCGCTGTAAGCGTGGGCGACATCTCGTACCGGAGCATCAAGGGCACCTACGACGTAAGGAGCGCCCCCATACACTTTGCGTGTAGTGACACTGTAGCCTGCACTAATATTACAATGTCTGAAGTTGAACTCTTACCACATGAAGGCGAGCTCATGGAAGATCCTTTCTGCTGGAACGCTTATGGAATTCAGCAGACGTTAACGATTCCTCCCATTGACTGCTTGCAAGATGGAATGCCACTGGCAATTGGAGAGACTGTTGACTATTCCTGCAGTATCTGATGATCGATCGATCGAGGAGTTCAAAAATGTTAGTTATAGTTTTATGTAAATGTTTACTTACTAGGCTGGTTTCTATCTTCACTTATACTATTTTGTACTAGCAGATATGGTCTATTTTAATGACCTTTTGTCTGTACTAGAGGATGATATGTGTACTAATAAAATGTTTAGTTTGAAGAGC
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc04g008230.2.1SL2.50ch04:1901841..1904669491-n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc04g008230.2SL2.50ch04:1901661..19047643,104-n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc04g008230.2.1.1SL2.50ch04:1904208..1904764557-n/a
exonexon:Solyc04g008230.2.1.2SL2.50ch04:1903947..1904114168-n/a
exonexon:Solyc04g008230.2.1.3SL2.50ch04:1903170..190321445-n/a
exonexon:Solyc04g008230.2.1.4SL2.50ch04:1902889..1903096208-2
exonexon:Solyc04g008230.2.1.5SL2.50ch04:1902693..190277482-1
exonexon:Solyc04g008230.2.1.6SL2.50ch04:1901661..1902349689-n/a
intronintron:Solyc04g008230.2.1.2SL2.50ch04:1904115..1904207n/a-n/a
intronintron:Solyc04g008230.2.1.3SL2.50ch04:1903215..1903946n/a-n/a
intronintron:Solyc04g008230.2.1.4SL2.50ch04:1903097..1903169n/a-n/a
intronintron:Solyc04g008230.2.1.5SL2.50ch04:1902775..1902888n/a-n/a
intronintron:Solyc04g008230.2.1.6SL2.50ch04:1902350..1902692n/a-n/a
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Related viewsNone found
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