Solanum lycopersicum mRNA Solyc03g120470.2.1
 mRNA details
|
| Name | Type |
Length
3,988
|
Organism |
|
Description
Aquaporin (AHRD V1 *-*- O81186_VERFO); contains Interpro domain(s) IPR012269 Aquaporin
|
|
Location(s)
SL2.50ch03:68850810..68860050
|
| Ontology term(s) |
|
GFF source
ITAG_eugene
|
- Interpro2go term
- GO:0016787
- GO:0016020
- GO:0042779
- GO:0016021
- Length
- 9241
- Nb exon
- 16
- Sifter term
- GO:0042781
| mRNA sequence
| spliced mRNA sequence, including UTRs |
>Solyc03g120470.2.1 Aquaporin (AHRD V1 *-*- O81186_VERFO); contains Interpro domain(s) IPR012269 Aquaporin
TCCTACTACTACGTATACTACTTACTATATATATGTGACAAAGAAATGTCTATTTGTGTCATCCAAAAGCAATTTTTCTCTCTAAGGATCTATTATTAGTAGTGAATTAAATTATTATTTTTGTAGTAAAAATGGCTGGCGGCGTAGCTATTGGAAGTTTTAGTGATTCATTCAGCGTTGTCTCTCTTAAGTCCTATCTTGCCGAATTCATCTCCACACTCATCTTTGTCTTCGCCGGAGTTGGTTCCGCCATTGCTTACGGCAAGTTGACAACAAATGCTGCACTTGATCCGGCTGGGCTTGTAGCTATTGCAGTTTGCCATGGATTTGCTCTATTCGTAGCCGTTTCGATTTCCGCTAACATCTCCGGTGGTCATGTTAACCCTGCGGTCACCTGTGGATTAACCTTCGGCGGACATATTACCTTTATCACTGGCTCCTTCTACATGCTTGCTCAACTTACCGGCGCCGCTGTAGCTTGCTTCCTCCTCAAATTCGTCACCGGAGGATGTGCTATTCCAACCCATGGAGTGGGAGCTGGTGTGAGCATACTAGAAGGACTCGTGATGGAAATAATAATCACATTTGGTTTAGTTTATACTGTGTTCGCAACCGCCGCTGACCCGAAGAAGGGTTCATTGGGCACAATTGCACCGATTGCAATTGGTCTCATTGTTGGAGCTAATATTTTGGCTGCCGGACCATTCTCCGGTGGATCAATGAACCCAGCTCGTTCATTTGGACCTGCAATGGTTAGTGGTAACTTTGAGGGTTTCTGGATCTACTGGATTGGTCCATTAGTTGGTGGTAGTTTGGCTGGTCTTATTTACACAAATGTGTTCATGACACAAGAACATTTCTTTGGTTTGCAGCTGTACATCCATTATCTTTTGATGGCAAGTGCAAAATCTTTCAGACATGGGCGGGGTTTTATGTTTGTGAACCTAAAACCCTGTGTGTGTACAAATAAAATGCCCCAAATCTCAAGCCTACGCCGCTTGTTCTCCTCCGCCAATCACCACGCACTTCTCACTTCCCCTTTAACCCCAAAACCTCCGCTTTCCCTTTCTCATCTCTTCAAAATCAAACAACCCCCATTTCTCCATACCCACACTCACAAGCCCTGTCGTCTTCTCTTCGCCGCATATTCAAGAAAAACCAAAAATATCGAACGACCCGGTTCGTTGAGCGGTTCAAGAAGGCGTAGTAGTAGCAGTAGTTCAAATAAGGAGAATAAAGGGAAGTCGGTAATGGAAGAAAGTAGTAGTAGTAGTGCGATTGCTGAGTCTGTTGGGTTTAATAAAAGAAGGGCTGAAGGTAAAGATAAGAATGATGGTCCCAGGAAAAACCTTCAACTCAAAGTTCGCAAACTCAACCCTGTTAATACTATTTCATACGTCCAGATCCTTGGGACTGGCATGGATACACAAGATACAACACCCTCAGTCCTTCTCTTCTTTGATAAACAGAGGTTTATTTTTAATGCTGGAGAAGGATTGCAACGCTTCTGCACAGAGCATAAAATTAAGCTATCAAAGATTGATCACATATTTCTGTCGCGAGTCTGTTCAGAAACTGCCGGTGGACTCCCAGGTCTTTTATTGACTTTGGCTGGCATGGGAGAAGAAGGAATGTCTGTCAATGTATGGGGTCCTTCTGATCTCAAGTACTTGGTCAATGCAATGAAATCATTCATCCCAAATGCCGCCATGGTCCATGCACGTAGTTTTGGCCCACCTATTGATTCTTCGGGGGCTACTGATGAACTCTTTGTTCCTATTAACGATGAGGTTGTCAAAATATCTGCTGTTCTGTTGCGACCACGTTACTCAAAAGTGTCTAAGACGACAAAGGCAGGATCCTCTGAACTTGATGATTCACTAGTTGGTGAAAATCTTTCAGCAGAGAGGATGCAGTCCACAGCTGAATTTGCATTGAAGCCTGGGGATCTTGCTGTAGTGTATATCTGTGAGTTGCCTGAAATTAAGGGAAAGTTTGATCCCAAAAAGGCTGCTGCTCTTGGGTTGAGACTTGGCCCAAAATGCCGTGAATTGCAACTCGGGAATTCTGTACAGTCAGATCATCAAGACATCATGGTTCACCCTAGTGATGTATTGGGGCCTTCTGTTCCTGGTCCTATTGTACTCGTTGTTGACTGCCCAACACCGTCTCATCTGCAAGAATTGTCGTCTATACATTCTCTCACTCCGTATTACTCAGATCCATCCAAACAATCCAAGGAAATGTGCAAAGAAGTTGATTGTGTGATACACCTTAGTCCTGCTTCAGTAACGTGTACAACTGAATATCAGCAATGGATGTCAAGATTTGGTGAGGTGCAGCACGTCATGGCAGGACATCAGCTGAAGAATGTTGAGATTCCAATTCTGAAGTCTAGTGCAAGAATCGCCACAAGGCTGAACTACTTGTGCCCTCAATTCTTTCCTTCGCCTGGTTTTTGGTCTCTTCAGCAGTTAAAGAGCTTACCCTCAGTCTCTAAGGGTCCAAGTGAGTTCTCTCTTCCAGCTTCATGTCAAGTTATTACGGCAGAGAACCTCCTCAAGTTCCATCTTCGCCCATATGCACAGCTTGGTTTAGACAGATCTGGTATTCCTGAAATTACTTCTCGGCCAAAAATCATAGAAGACTTAATTACAGAAATTCCTGAAATTGTGGATGCTTCTGAGCATATTACCCAACTGTTGCATCATGGTAACAACATTGCAAATGGAGGCAGCACGACATTGCAGGCCAACAATGTTGTGATAGAAGAGCCCTGGTTGCATGAAACTGCATTACCTAGTTGTTTGGAAGGTATAACAAGAGAGGATATGGAGATTGTTCTTCTTGGAACTGGTTCTTCCCAGCCTTCAAAATATCGAAATGTCACTTCCATTTTTATCAATCTTTTCTCAAAGGGAAGTATTCTGTTAGATTGTGGTGAAGGAACATTGGGACAGCTAAAAAGAAGATTTGGCATTGAAGGTGCTGATGAAGCTGTAAAAGGTCTAAGGTGCATTTGGATTTCTCATATTCATGCTGATCATCATACTGGTATTGCAAGAATACTTGCTCTCCGACGCGATTTACTTTATGAAACTCCTCATGAACCTTTAGTTGTTGTGGGACCACGACAGCTTAAGATATTCCTTGATGCATACCAAAAGCTTGAGGACCTAGATATGCAGTTCCTCGATTGTAGGCAAACTACAGAAGCTTCATTGAGGACTTCTGATTCAGGTGAAAACAAGGATGCTAATGGGAGTGTAGGTGTACAAAATGACCAAAAGAATGGTTCTAACTTATTTGCTAAAGGTAGCCGTATGGAGAGTTATTGGAAGAGGCCAGGCAGCCCAGCTGATGCATCTGCAGCATTCCCAGTGCTGGCAATGTTGAAGAGAATTCTGAGAGAAGCAGGATTGGAAGCACTGATCAGCTTTCCTGTTATTCATTGTCCACAAGCATATGGTGTTGTCCTGAAGGCGGCGGATAGGACTAACAGCACTGGGAAAAAGATACCGGGGTGGAAAATTGTTTACTCTGGCGACACGAGGCCTTGTCCAGAACTAGTTGCAGCGTCCCATGGGGCCACAGTTCTTATTCATGAGGCTACCTTTGAAGATGGCATGGTGGAAGAAGCCATAGCGAGAAATCACAGCACAACACAGGAAGCTATTGAAGTAGGGGACGCTGCTGGAGCATATCGAATCATCCTCACTCATTTCAGTCAAAGATACCCTAAAATTCCAGTTTTTGACGAAACACACATGCACAAAACAAGCATTGCTTTTGATATGATGAGTGTTAACTTAGCAGACCTACCCATGCTTCCAAGAGTTCTTCCATATCTTAAACTGCTATTTCGTGATGAAATGATTGTTGATGAATCTGATAATGTAAATGTTGCTACAGCAGCAGCTATTTGAGTTACTGAATAACACACACTGATCAATTTCTTTCTATTCATTTATACGCAGGAGTTAAATCA
TCCTACTACTACGTATACTACTTACTATATATATGTGACAAAGAAATGTCTATTTGTGTCATCCAAAAGCAATTTTTCTCTCTAAGGATCTATTATTAGTAGTGAATTAAATTATTATTTTTGTAGTAAAAATGGCTGGCGGCGTAGCTATTGGAAGTTTTAGTGATTCATTCAGCGTTGTCTCTCTTAAGTCCTATCTTGCCGAATTCATCTCCACACTCATCTTTGTCTTCGCCGGAGTTGGTTCCGCCATTGCTTACGGCAAGTTGACAACAAATGCTGCACTTGATCCGGCTGGGCTTGTAGCTATTGCAGTTTGCCATGGATTTGCTCTATTCGTAGCCGTTTCGATTTCCGCTAACATCTCCGGTGGTCATGTTAACCCTGCGGTCACCTGTGGATTAACCTTCGGCGGACATATTACCTTTATCACTGGCTCCTTCTACATGCTTGCTCAACTTACCGGCGCCGCTGTAGCTTGCTTCCTCCTCAAATTCGTCACCGGAGGATGTGCTATTCCAACCCATGGAGTGGGAGCTGGTGTGAGCATACTAGAAGGACTCGTGATGGAAATAATAATCACATTTGGTTTAGTTTATACTGTGTTCGCAACCGCCGCTGACCCGAAGAAGGGTTCATTGGGCACAATTGCACCGATTGCAATTGGTCTCATTGTTGGAGCTAATATTTTGGCTGCCGGACCATTCTCCGGTGGATCAATGAACCCAGCTCGTTCATTTGGACCTGCAATGGTTAGTGGTAACTTTGAGGGTTTCTGGATCTACTGGATTGGTCCATTAGTTGGTGGTAGTTTGGCTGGTCTTATTTACACAAATGTGTTCATGACACAAGAACATTTCTTTGGTTTGCAGCTGTACATCCATTATCTTTTGATGGCAAGTGCAAAATCTTTCAGACATGGGCGGGGTTTTATGTTTGTGAACCTAAAACCCTGTGTGTGTACAAATAAAATGCCCCAAATCTCAAGCCTACGCCGCTTGTTCTCCTCCGCCAATCACCACGCACTTCTCACTTCCCCTTTAACCCCAAAACCTCCGCTTTCCCTTTCTCATCTCTTCAAAATCAAACAACCCCCATTTCTCCATACCCACACTCACAAGCCCTGTCGTCTTCTCTTCGCCGCATATTCAAGAAAAACCAAAAATATCGAACGACCCGGTTCGTTGAGCGGTTCAAGAAGGCGTAGTAGTAGCAGTAGTTCAAATAAGGAGAATAAAGGGAAGTCGGTAATGGAAGAAAGTAGTAGTAGTAGTGCGATTGCTGAGTCTGTTGGGTTTAATAAAAGAAGGGCTGAAGGTAAAGATAAGAATGATGGTCCCAGGAAAAACCTTCAACTCAAAGTTCGCAAACTCAACCCTGTTAATACTATTTCATACGTCCAGATCCTTGGGACTGGCATGGATACACAAGATACAACACCCTCAGTCCTTCTCTTCTTTGATAAACAGAGGTTTATTTTTAATGCTGGAGAAGGATTGCAACGCTTCTGCACAGAGCATAAAATTAAGCTATCAAAGATTGATCACATATTTCTGTCGCGAGTCTGTTCAGAAACTGCCGGTGGACTCCCAGGTCTTTTATTGACTTTGGCTGGCATGGGAGAAGAAGGAATGTCTGTCAATGTATGGGGTCCTTCTGATCTCAAGTACTTGGTCAATGCAATGAAATCATTCATCCCAAATGCCGCCATGGTCCATGCACGTAGTTTTGGCCCACCTATTGATTCTTCGGGGGCTACTGATGAACTCTTTGTTCCTATTAACGATGAGGTTGTCAAAATATCTGCTGTTCTGTTGCGACCACGTTACTCAAAAGTGTCTAAGACGACAAAGGCAGGATCCTCTGAACTTGATGATTCACTAGTTGGTGAAAATCTTTCAGCAGAGAGGATGCAGTCCACAGCTGAATTTGCATTGAAGCCTGGGGATCTTGCTGTAGTGTATATCTGTGAGTTGCCTGAAATTAAGGGAAAGTTTGATCCCAAAAAGGCTGCTGCTCTTGGGTTGAGACTTGGCCCAAAATGCCGTGAATTGCAACTCGGGAATTCTGTACAGTCAGATCATCAAGACATCATGGTTCACCCTAGTGATGTATTGGGGCCTTCTGTTCCTGGTCCTATTGTACTCGTTGTTGACTGCCCAACACCGTCTCATCTGCAAGAATTGTCGTCTATACATTCTCTCACTCCGTATTACTCAGATCCATCCAAACAATCCAAGGAAATGTGCAAAGAAGTTGATTGTGTGATACACCTTAGTCCTGCTTCAGTAACGTGTACAACTGAATATCAGCAATGGATGTCAAGATTTGGTGAGGTGCAGCACGTCATGGCAGGACATCAGCTGAAGAATGTTGAGATTCCAATTCTGAAGTCTAGTGCAAGAATCGCCACAAGGCTGAACTACTTGTGCCCTCAATTCTTTCCTTCGCCTGGTTTTTGGTCTCTTCAGCAGTTAAAGAGCTTACCCTCAGTCTCTAAGGGTCCAAGTGAGTTCTCTCTTCCAGCTTCATGTCAAGTTATTACGGCAGAGAACCTCCTCAAGTTCCATCTTCGCCCATATGCACAGCTTGGTTTAGACAGATCTGGTATTCCTGAAATTACTTCTCGGCCAAAAATCATAGAAGACTTAATTACAGAAATTCCTGAAATTGTGGATGCTTCTGAGCATATTACCCAACTGTTGCATCATGGTAACAACATTGCAAATGGAGGCAGCACGACATTGCAGGCCAACAATGTTGTGATAGAAGAGCCCTGGTTGCATGAAACTGCATTACCTAGTTGTTTGGAAGGTATAACAAGAGAGGATATGGAGATTGTTCTTCTTGGAACTGGTTCTTCCCAGCCTTCAAAATATCGAAATGTCACTTCCATTTTTATCAATCTTTTCTCAAAGGGAAGTATTCTGTTAGATTGTGGTGAAGGAACATTGGGACAGCTAAAAAGAAGATTTGGCATTGAAGGTGCTGATGAAGCTGTAAAAGGTCTAAGGTGCATTTGGATTTCTCATATTCATGCTGATCATCATACTGGTATTGCAAGAATACTTGCTCTCCGACGCGATTTACTTTATGAAACTCCTCATGAACCTTTAGTTGTTGTGGGACCACGACAGCTTAAGATATTCCTTGATGCATACCAAAAGCTTGAGGACCTAGATATGCAGTTCCTCGATTGTAGGCAAACTACAGAAGCTTCATTGAGGACTTCTGATTCAGGTGAAAACAAGGATGCTAATGGGAGTGTAGGTGTACAAAATGACCAAAAGAATGGTTCTAACTTATTTGCTAAAGGTAGCCGTATGGAGAGTTATTGGAAGAGGCCAGGCAGCCCAGCTGATGCATCTGCAGCATTCCCAGTGCTGGCAATGTTGAAGAGAATTCTGAGAGAAGCAGGATTGGAAGCACTGATCAGCTTTCCTGTTATTCATTGTCCACAAGCATATGGTGTTGTCCTGAAGGCGGCGGATAGGACTAACAGCACTGGGAAAAAGATACCGGGGTGGAAAATTGTTTACTCTGGCGACACGAGGCCTTGTCCAGAACTAGTTGCAGCGTCCCATGGGGCCACAGTTCTTATTCATGAGGCTACCTTTGAAGATGGCATGGTGGAAGAAGCCATAGCGAGAAATCACAGCACAACACAGGAAGCTATTGAAGTAGGGGACGCTGCTGGAGCATATCGAATCATCCTCACTCATTTCAGTCAAAGATACCCTAAAATTCCAGTTTTTGACGAAACACACATGCACAAAACAAGCATTGCTTTTGATATGATGAGTGTTAACTTAGCAGACCTACCCATGCTTCCAAGAGTTCTTCCATATCTTAAACTGCTATTTCGTGATGAAATGATTGTTGATGAATCTGATAATGTAAATGTTGCTACAGCAGCAGCTATTTGAGTTACTGAATAACACACACTGATCAATTTCTTTCTATTCATTTATACGCAGGAGTTAAATCA
 Genomic sequence(s)
| unprocessed genomic sequence underlying each location of this mRNA |
| Related features
|
| Features that derive from this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| polypeptide | Solyc03g120470.2.1 | SL2.50ch03:68850871..68859919 | 1,265 | - | n/a |
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| Features this mRNA is a part of |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| gene | Solyc03g120470.2 | SL2.50ch03:68850810..68860050 | 9,241 | - | n/a |
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| Features that are parts of this mRNA |
| Type | Name | Location | Length | Strand | Phase |
|---|---|---|---|---|---|
| exon | exon:Solyc03g120470.2.1.1 | SL2.50ch03:68859790..68860050 | 261 | - | 2 |
| exon | exon:Solyc03g120470.2.1.10 | SL2.50ch03:68853457..68853915 | 459 | - | n/a |
| exon | exon:Solyc03g120470.2.1.11 | SL2.50ch03:68853115..68853383 | 269 | - | 1 |
| exon | exon:Solyc03g120470.2.1.12 | SL2.50ch03:68852858..68853005 | 148 | - | n/a |
| exon | exon:Solyc03g120470.2.1.13 | SL2.50ch03:68852696..68852746 | 51 | - | n/a |
| exon | exon:Solyc03g120470.2.1.14 | SL2.50ch03:68852091..68852497 | 407 | - | 1 |
| exon | exon:Solyc03g120470.2.1.15 | SL2.50ch03:68851368..68852004 | 637 | - | n/a |
| exon | exon:Solyc03g120470.2.1.16 | SL2.50ch03:68850810..68851189 | 380 | - | n/a |
| exon | exon:Solyc03g120470.2.1.2 | SL2.50ch03:68859254..68859504 | 251 | - | n/a |
| exon | exon:Solyc03g120470.2.1.3 | SL2.50ch03:68858834..68859178 | 345 | - | n/a |
| exon | exon:Solyc03g120470.2.1.4 | SL2.50ch03:68858619..68858654 | 36 | - | n/a |
| exon | exon:Solyc03g120470.2.1.5 | SL2.50ch03:68856411..68856920 | 510 | - | n/a |
| exon | exon:Solyc03g120470.2.1.6 | SL2.50ch03:68855204..68855293 | 90 | - | n/a |
| exon | exon:Solyc03g120470.2.1.7 | SL2.50ch03:68854380..68854424 | 45 | - | n/a |
| exon | exon:Solyc03g120470.2.1.8 | SL2.50ch03:68854191..68854245 | 55 | - | 2 |
| exon | exon:Solyc03g120470.2.1.9 | SL2.50ch03:68854020..68854063 | 44 | - | n/a |
| intron | intron:Solyc03g120470.2.1.10 | SL2.50ch03:68853916..68854019 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.11 | SL2.50ch03:68853384..68853456 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.12 | SL2.50ch03:68853006..68853114 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.13 | SL2.50ch03:68852747..68852857 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.14 | SL2.50ch03:68852498..68852695 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.15 | SL2.50ch03:68852005..68852090 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.16 | SL2.50ch03:68851190..68851367 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.2 | SL2.50ch03:68859505..68859789 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.3 | SL2.50ch03:68859179..68859253 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.4 | SL2.50ch03:68858655..68858833 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.5 | SL2.50ch03:68856921..68858618 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.6 | SL2.50ch03:68855294..68856410 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.7 | SL2.50ch03:68854425..68855203 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.8 | SL2.50ch03:68854246..68854379 | n/a | - | n/a |
| intron | intron:Solyc03g120470.2.1.9 | SL2.50ch03:68854064..68854190 | n/a | - | n/a |
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