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Solanum lycopersicum mRNA Solyc03g118290.2.1

mRNA details  
Name
Solyc03g118290.2.1
Type
mRNA
Length
3,236
Organism
Solanum lycopersicum
Description
Auxin response factor 2 (AHRD V1 **** Q2LAJ3_SOLLC); contains Interpro domain(s) IPR011525 Aux/IAA-ARF-dimerisation IPR003340 Transcriptional factor B3
Location(s)
SL2.50ch03:67215635..67223106
Ontology term(s)
GFF source
ITAG_eugene
From BOGAS
1
Interpro2go term
  • GO:0005634
  • GO:0046983
  • GO:0006355
Length
7472
Nb exon
15
Sifter term
  • GO:0005515
  • GO:0003700
mRNA sequence spliced mRNA sequence, including UTRs 
>Solyc03g118290.2.1 Auxin response factor 2 (AHRD V1 **** Q2LAJ3_SOLLC); contains Interpro domain(s) IPR011525 Aux/IAA-ARF-dimerisation IPR003340 Transcriptional factor B3

TGCTTTTGTGTCCTTTTCTTTTTTTTTGCTCTCTTTCTCTCTCATCACTCACATGAAGAAGCTCCTACTTCTATCCATTGAAGATAGATAAATGAACACGCATATACATACAGTTTTTAGAGAGAGAAACTAGAGCGAGAAGGCTCTGTAACTTCAATTTTGAGTGTTGATTGCTGTTTCTAGGGTCTCTTTGGTTACCAGTTTTGCATGCTTTTGAGCTGAGGAAGAGTTTAGTGCTTTTTTTCTGGTGAATTTTGGAGAAGGAAGTTTTATTTTGTGCTTGTTTTATGAATTGATTAGTGTGGATATGAGAGATCTGTGTTGAGAATTAGTGTACGGAAATGGCTGCTTCGGAGGTGTCGATTCAAGGTTACAGCGAGCCGAGTGATGGTTCTAGGCCGGTTTCAGAGACTGGTAGGAGTAGTTCCGGTGTCGGAATAGTTGATGCTGATACGGCGTTGTACACGGAGCTTTGGCGTTCATGTGCCGGTCCACTTGTGACGGTACCGCGAGAGGGTGAGCTGGTGTACTATTTCCCTCAAGGACATATCGAGCAGGTTGAAGCATCAACTAATCAAGTGGCTGACCAGCAGATGCCTTTGTATAATCTTCCATCTAAGATTCTATGCCGTGTTGTGAATGTCCTGTTAAAGGCTGAACCAGATACTGATGAGGTGTATGCACAAGTGACTTTGATGCCGGAGCCAAATCAAGATGAGAATGCAGTGAAGAAGGAACCTATGCGCCCTCCTCCACCACGATTTCATGTACACTCTTTTTGTAAGACTCTAACAGCCTCTGATACAAGCACTCACGGTGGATTTTCCGTCTTGAGACGACATGCTGATGAATGCCTCCCCCAACTGGACATGTCTCGGCAGCCTCCCACACAGGAGTTGGTGGCCAAAGATTTACATGGAAATGAGTGGCGATTCAGGCATATATTCCGGGGCCAGCCTAGGAGGCATCTTCTTCAGAGTGGTTGGAGTGTCTTTGTTAGTTCGAAGAGGCTTGTTGCTGGGGATGCATTCATATTTCTTAGAGGTGAGAATGGGGAGCTTCGTGTTGGTGTTAGACGTGCCATGAGACAGCAAGGAAATGCTCCATCATCGGTGATATCCAGTCATAGCATGCATCTTGGTGTACTTGCAACAGCTTGGCATGCCATTCAAACAAAAACGATGTTCACTGTGTATTACAAGCCCAGGACAAGCCCTGCTGAGTTTATAGTTCCATATGACCACTATATGGAATCTGTGAAGAATAATTACTCTATTGGAATGAGGTTTAAGATGAGGTTCGAAGGTGAAGAAGCTCCAGAGCAAAGGTTTACTGGAACTATTGTTGGCATTGAAGATGCTGATCCCCAAAGGTGGCTTGAATCTAAGTGGAGATGTCTGAAGGTACGGTGGGATGAAAATTCAAGCATTCCAAGGCCAGACCGAGTTTCACCGTGGAAAATAGAACCAGCTCTTAGCCCTCCTGCACTTAATGTACCTCCAGTTGCAAGGCCAAAAAGGCCTAGATCCAGTATTTTGCCCACATCTCCTGATTCATCTGTCCTTACTAGGGAAGGTTCATCAAGAGCGACAGCAGACCATTCCCAAGCCAGTGGGTTTCCGAGGGTCTTGCAAGGTCAAGAGTTATCGACCTTTAGAGGCGGTTTTGCAGAAATTAATGAGACAGACTTGTCTGAGAAACCAATGATATGGCAAACATCAGTGAATGATGAAAAGAATGATATTCATTCTGCATCAAAGAGATATCTTCCAGATAAATGGCTACCTTTAGGGAGGCCTGAGTCATCTCTCACAGATTTGTTATCAGGTTTTGGCTCCTCCCATGGGTTCTGTTTACCCTCTGCGGACCAAGCTGCGTTTGGTGCTAGATTGGTGAAGCAACAAACACAAGATCAGGAAAAGGATTTTAGCTTATTGGGAAAGCCATGGTCTCTTCTGTCTTCCGGTCTCTCTCTTAATCTGATGGATTCTGGTTCAAAAGCTCCTGGCATAGGGGGTGATACTCCCTATCAAATGCGGGGAGATGCTAGGTATAGTGGTTATGGTGAGTTTTCAGTACTCCCCGGTCATAGGGTTGCAAATCAGCAGGGAAGCTGGATTATGCCTCAACCAGTGTCGCCTTACATGCAGCTCTCCTCTCATTCAAGAGAAATGATGCATAAACCCTCTGTAGTAAAGCAACCCGAGGCTGTGAAACCCAAAGAGGGTAACTACAAACTATTTGGCATTCCTCTTACAAGTAATGTTTGCACAGATGCTGTTATGATGCGGAAAAGTTCATTGATTGATCCAGCAAGTGACATGAATATTGGTATACACCCTCATCAATCCCTTGCCACTGATTCTGATCAAAGGTCTGAGCAATCAAAGGGATCAAAGGTGGATGATGGAGTTGCAGCTAATGATCATGACAAACAATTTCATACCTTTCATCTTGCTGCTAGAGATAAGGATGGCAAAGGGCATAGTAGTTCTACAAGGAGCTGCACAAAGGTTCATAAACAGGGTACAGCACTCGGAAGGTCCGTAGATCTTGCAAAGTTCAACAATTATGACGAATTGATTGCTGAACTGGATCAACTTTTTGATTTTAATGGTGAACTCAAGGCTCGGAGTAAGAGTTGGCTGGTTGTATACACTGATGATGAGGGTGACATGATGCTTGTTGGAGATGATCCATGGCAGGAATTTTGTGGTATGGTTCGCAAGATTTTCATCTATACAAAAGAGGAGGTGCAGCGTATGAATCCAGGGACCCTTAATTCAAAAGGTGAGGACACTTCTTCTGTTGCTGAGGGCTCAGACGCTAAAGAAGTGAAGAATCTGCAACTTCCTTCTGAATCTGGTCAAGCAGAATCTTAGGTTTTCCTCCAAAATTGAGGTTTATAAGATAGCGAGGAGATGGCTTTTATCCACCTAGGTGTTACTTTTTTGGGGATTTTTGAATATAACCTACAATATCAACTCCCTTTGACGTGTGGATGGGGATGGTCTCTTCATATAAATGCAGCTTCAGTATTTGCAGTTTTGAGCCTTTATTTGGAGCCAATATCTGGCCCCTTATCTATCTATATACATAGTATATGTAAATTATCAGCGTTGGTCATTAACGTTGCTTCTGCCAATCTCACTTTTGTACATACCAATTTCTCTAGCTGTAGCTGTAATTAAGATTTCGATTCTACTATGTATGTACCTGCCTTACTGTTGATTTTT
Genomic sequence(s) unprocessed genomic sequence underlying each location of this mRNA 
Related features  
Features that derive from this mRNA 
TypeNameLocationLengthStrandPhase
polypeptideSolyc03g118290.2.1SL2.50ch03:67215975..67222626847+n/a
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Features this mRNA is a part of 
TypeNameLocationLengthStrandPhase
geneSolyc03g118290.2SL2.50ch03:67215635..672231067,472+n/a
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Features that are parts of this mRNA 
TypeNameLocationLengthStrandPhase
exonexon:Solyc03g118290.2.1.1SL2.50ch03:67215635..67216075441+n/a
exonexon:Solyc03g118290.2.1.10SL2.50ch03:67219225..6721930076+1
exonexon:Solyc03g118290.2.1.11SL2.50ch03:67219384..67219555172+1
exonexon:Solyc03g118290.2.1.12SL2.50ch03:67221150..67222087938+n/a
exonexon:Solyc03g118290.2.1.13SL2.50ch03:67222161..67222351191+2
exonexon:Solyc03g118290.2.1.14SL2.50ch03:67222449..67222645197+n/a
exonexon:Solyc03g118290.2.1.15SL2.50ch03:67222772..67223106335+1
exonexon:Solyc03g118290.2.1.2SL2.50ch03:67216153..67216268116+n/a
exonexon:Solyc03g118290.2.1.3SL2.50ch03:67216532..6721662796+2
exonexon:Solyc03g118290.2.1.4SL2.50ch03:67216770..6721682657+n/a
exonexon:Solyc03g118290.2.1.5SL2.50ch03:67216981..67217136156+n/a
exonexon:Solyc03g118290.2.1.6SL2.50ch03:67217222..6721730685+n/a
exonexon:Solyc03g118290.2.1.7SL2.50ch03:67218083..6721817391+n/a
exonexon:Solyc03g118290.2.1.8SL2.50ch03:67218252..67218416165+2
exonexon:Solyc03g118290.2.1.9SL2.50ch03:67218886..67219005120+1
intronintron:Solyc03g118290.2.1.1SL2.50ch03:67216076..67216152n/a+n/a
intronintron:Solyc03g118290.2.1.10SL2.50ch03:67219301..67219383n/a+n/a
intronintron:Solyc03g118290.2.1.11SL2.50ch03:67219556..67221149n/a+n/a
intronintron:Solyc03g118290.2.1.12SL2.50ch03:67222088..67222160n/a+n/a
intronintron:Solyc03g118290.2.1.13SL2.50ch03:67222352..67222448n/a+n/a
intronintron:Solyc03g118290.2.1.14SL2.50ch03:67222646..67222771n/a+n/a
intronintron:Solyc03g118290.2.1.2SL2.50ch03:67216269..67216531n/a+n/a
intronintron:Solyc03g118290.2.1.3SL2.50ch03:67216628..67216769n/a+n/a
intronintron:Solyc03g118290.2.1.4SL2.50ch03:67216827..67216980n/a+n/a
intronintron:Solyc03g118290.2.1.5SL2.50ch03:67217137..67217221n/a+n/a
intronintron:Solyc03g118290.2.1.6SL2.50ch03:67217307..67218082n/a+n/a
intronintron:Solyc03g118290.2.1.7SL2.50ch03:67218174..67218251n/a+n/a
intronintron:Solyc03g118290.2.1.8SL2.50ch03:67218417..67218885n/a+n/a
intronintron:Solyc03g118290.2.1.9SL2.50ch03:67219006..67219224n/a+n/a
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Related viewsNone found
http%3A%2F%2Fwww.solgenomics.net%3A8080%2Ffeature%2F17776910%2Fdetails feature 17776910
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